Genetics of Atrial Fibrillation: Implications for Future Research Directions and Personalized Medicine

Atrial fibrillation (AF) was first described in humans approximately 100 years ago,1 and familial forms of AF were reported over 70 years ago.2,3 Within the last ten years, three critical developments have advanced our understanding of the genetic basis of AF. First, multiple epidemiological studies have demonstrated that AF is heritable. Second, rare mutations predisposing to AF have been identified in potassium and sodium channels, gap junction proteins and signaling molecules. Finally, population-based, genome-wide association studies (GWAS) have implicated novel biological pathways responsible for AF. The molecular biology of established mutations underlying AF has been well summarized.4,5 Here, we focus on the approaches employed to identify AF susceptibility loci and describe the findings from recent GWAS of AF. We also address future directions in the field of AF genetics that may improve our understanding of AF pathophysiology, risk prediction, prevention and patient management.

[1]  Toshihiro Tanaka The International HapMap Project , 2003, Nature.

[2]  Dan Wang,et al.  Assessment of association of rs2200733 on chromosome 4q25 with atrial fibrillation and ischemic stroke in a Chinese Han population , 2009, Human Genetics.

[3]  Prashanthan Sanders,et al.  Electrical Remodeling of the Atria in Congestive Heart Failure: Electrophysiological and Electroanatomic Mapping in Humans , 2003, Circulation.

[4]  Jeffrey L. Anderson,et al.  Sodium channel mutations and susceptibility to heart failure and atrial fibrillation. , 2005, JAMA.

[5]  P. Ellinor,et al.  Mutation in the S3 segment of KCNQ1 results in familial lone atrial fibrillation. , 2009, Heart rhythm.

[6]  Silvia G. Priori,et al.  ACC/AHA/ESC 2006 guidelines for the management of patients with atrial fibrillation: a report of the American College of Cardiology/American Heart Association task force on practice guidelines and the European society of cardiology committee for PRAC , 2006 .

[7]  R. Weinshilboum,et al.  Cardiovascular pharmacogenomics and individualized drug therapy , 2009, Nature Reviews Cardiology.

[8]  Jesper Hastrup Svendsen,et al.  Familial Aggregation of Atrial Fibrillation: A Study in Danish Twins , 2009, Circulation. Arrhythmia and electrophysiology.

[9]  G. Black,et al.  A mutation in the RIEG1 gene associated with Peters’ anomaly , 1999, Journal of medical genetics.

[10]  D. Schwartzman,et al.  Genetic susceptibility to atrial fibrillation in patients with congestive heart failure. , 2006, Heart rhythm.

[11]  H. Yeh,et al.  Association of the human minK gene 38G allele with atrial fibrillation: evidence of possible genetic control on the pathogenesis of atrial fibrillation. , 2002, American heart journal.

[12]  D. Levy,et al.  Development of a risk score for atrial fibrillation (Framingham Heart Study): a community-based cohort study , 2009, The Lancet.

[13]  Kari Stefansson,et al.  Several common variants modulate heart rate, PR interval and QRS duration , 2010, Nature Genetics.

[14]  J. Brugada,et al.  A mutation in the sodium channel is responsible for the association of long QT syndrome and familial atrial fibrillation. , 2008, Heart rhythm.

[15]  L. Mestroni,et al.  SCN5A Mutation Associated With Dilated Cardiomyopathy, Conduction Disorder, and Arrhythmia , 2004, Circulation.

[16]  Masanori Hirose,et al.  Early electrical remodeling in rabbit pulmonary vein results from trafficking of intracellular SK2 channels to membrane sites. , 2007, Cardiovascular research.

[17]  A. Prystupa,et al.  Original article MinK gene polymorphism in the pathogenesis of lone atrial fibrillation , 2006 .

[18]  L. Chen,et al.  Genetics of Atrial Fibrillation , 2011 .

[19]  P. Vernant,et al.  [Familial auricular fibrillation]. , 1976, La Nouvelle presse medicale.

[20]  J. Ruskin,et al.  Cardiac sodium channel mutation in atrial fibrillation. , 2008, Heart rhythm.

[21]  Thomas Lumley,et al.  Common variants at ten loci influence QT interval duration in the QTGEN Study , 2009, Nature Genetics.

[22]  Manuel A. R. Ferreira,et al.  Assumption-Free Estimation of Heritability from Genome-Wide Identity-by-Descent Sharing between Full Siblings , 2006, PLoS genetics.

[23]  Martin Bienengraeber,et al.  Kv1.5 channelopathy due to KCNA5 loss-of-function mutation causes human atrial fibrillation. , 2006, Human molecular genetics.

[24]  Richard P Harvey,et al.  Pitx2c and Nkx2-5 Are Required for the Formation and Identity of the Pulmonary Myocardium , 2007, Circulation research.

[25]  C. Gieger,et al.  A sequence variant in ZFHX3 on 16q22 associates with atrial fibrillation and ischemic stroke , 2009, Nature Genetics.

[26]  P. Ellinor,et al.  Ion channel mutations in AF: signal or noise? , 2008, Heart rhythm.

[27]  H. Hamada,et al.  Pitx2, a Bicoid-Type Homeobox Gene, Is Involved in a Lefty-Signaling Pathway in Determination of Left-Right Asymmetry , 1998, Cell.

[28]  J. Seidman,et al.  Variation in the 4q25 Chromosomal Locus Predicts Atrial Fibrillation After Coronary Artery Bypass Graft Surgery , 2009, Circulation. Cardiovascular genetics.

[29]  F. Sofi,et al.  Analysis of minK and eNOS genes as candidate loci for predisposition to non-valvular atrial fibrillation. , 2006, European heart journal.

[30]  Camilla,et al.  A sequence variant in ZFHX 3 on 16 q 22 associates with atrial fibrillation and ischemic stroke , 2009 .

[31]  D. Levy,et al.  Independent risk factors for atrial fibrillation in a population-based cohort. The Framingham Heart Study. , 1994, JAMA.

[32]  J. Ruskin,et al.  Familial aggregation in lone atrial fibrillation , 2005, Human Genetics.

[33]  P. Ellinor,et al.  ACE I/D polymorphism associated with abnormal atrial and atrioventricular conduction in lone atrial fibrillation and structural heart disease: implications for electrical remodeling. , 2009, Heart rhythm.

[34]  P. Ellinor,et al.  Polymorphisms and atrial fibrillation: sorting the wheat from the chaff. , 2008, European Heart Journal.

[35]  Sonja W. Scholz,et al.  A genome-wide genotyping study in patients with ischaemic stroke: initial analysis and data release , 2007, The Lancet Neurology.

[36]  Anbupalam Thalamuthu,et al.  A Genome-Wide Association Study Identifies Novel and Functionally Related Susceptibility Loci for Kawasaki Disease , 2009, PLoS genetics.

[37]  F. Collins,et al.  Familiality of Quantitative Metabolic Traits in Finnish Families with Non-Insulin-Dependent Diabetes mellitus , 1999, Human Heredity.

[38]  K. Stefánsson,et al.  Familial aggregation of atrial fibrillation in Iceland. , 2006, European heart journal.

[39]  J. Murabito,et al.  Temporal Relations of Atrial Fibrillation and Congestive Heart Failure and Their Joint Influence on Mortality The Framingham Heart Study , 2003, Circulation.

[40]  D. Levy,et al.  Prevention of Atrial Fibrillation: Report From a National Heart, Lung, and Blood Institute Workshop , 2009, Circulation.

[41]  M. de Andrade,et al.  Atrial natriuretic peptide frameshift mutation in familial atrial fibrillation. , 2008, The New England journal of medicine.

[42]  C. Tabin,et al.  The Transcription Factor Pitx2 Mediates Situs-Specific Morphogenesis in Response to Left-Right Asymmetric Signals , 1998, Cell.

[43]  M. Gollob,et al.  Impact of genetic discoveries on the classification of lone atrial fibrillation. , 2010, Journal of the American College of Cardiology.

[44]  Li Jin,et al.  Angiotensinogen polymorphisms and acquired atrial fibrillation in Chinese. , 2010, Journal of electrocardiology.

[45]  Richard P. Harvey,et al.  Molecular Pathway for the Localized Formation of the Sinoatrial Node , 2007, Circulation research.

[46]  M. Komajda,et al.  Expanding the phenotype of LMNA mutations in dilated cardiomyopathy and functional consequences of these mutations , 2003, Journal of medical genetics.

[47]  Ling Lu,et al.  Differential expression of small-conductance Ca2+-activated K+ channels SK1, SK2, and SK3 in mouse atrial and ventricular myocytes. , 2005, American journal of physiology. Heart and circulatory physiology.

[48]  D. Levy,et al.  QT interval is a heritable quantitative trait with evidence of linkage to chromosome 3 in a genome-wide linkage analysis: The Framingham Heart Study. , 2005, Heart rhythm.

[49]  T. Meitinger,et al.  The non-synonymous coding IKr-channel variant KCNH2-K897T is associated with atrial fibrillation: results from a systematic candidate gene-based analysis of KCNH2 (HERG). , 2008, European heart journal.

[50]  J Clémenty,et al.  Spontaneous initiation of atrial fibrillation by ectopic beats originating in the pulmonary veins. , 1998, The New England journal of medicine.

[51]  José Jalife,et al.  Reentry and atrial fibrillation. , 2007, Heart rhythm.

[52]  E. Stone,et al.  Autosomal dominant iris hypoplasia is caused by a mutation in the Rieger syndrome (RIEG/PITX2) gene. , 1998, American journal of ophthalmology.

[53]  J. Halperin,et al.  Comparative performance of gene‐based warfarin dosing algorithms in a multiethnic population , 2010, Journal of thrombosis and haemostasis : JTH.

[54]  Frank Sachse,et al.  De novo KCNQ1 mutation responsible for atrial fibrillation and short QT syndrome in utero. , 2005, Cardiovascular research.

[55]  Peter Kraft,et al.  Genetic risk prediction--are we there yet? , 2009, The New England journal of medicine.

[56]  Robert Lemery,et al.  Gain-of-function mutation of Nav1.5 in atrial fibrillation enhances cellular excitability and lowers the threshold for action potential firing. , 2009, Biochemical and biophysical research communications.

[57]  P. Visscher,et al.  Common polygenic variation contributes to risk of schizophrenia and bipolar disorder , 2009, Nature.

[58]  Thomas Meitinger,et al.  Common Variants in KCNN3 are Associated with Lone Atrial Fibrillation , 2010, Nature Genetics.

[59]  A. Varghese,et al.  Stretch-sensitive KCNQ1 mutation A link between genetic and environmental factors in the pathogenesis of atrial fibrillation? , 2007, Journal of the American College of Cardiology.

[60]  Thomas Meitinger,et al.  Large scale replication and meta-analysis of variants on chromosome 4q25 associated with atrial fibrillation. , 2008, European heart journal.

[61]  L. Lai,et al.  The association of human connexin 40 genetic polymorphisms with atrial fibrillation. , 2007, International journal of cardiology.

[62]  S. Bendahhou,et al.  Identification of a KCNE2 gain-of-function mutation in patients with familial atrial fibrillation. , 2004, American journal of human genetics.

[63]  Douglas L Packer,et al.  Familial atrial fibrillation is a genetically heterogeneous disorder. , 2003, Journal of the American College of Cardiology.

[64]  R. A. Bailey,et al.  Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes , 2007, Nature Genetics.

[65]  Alan M. Moses,et al.  In vivo enhancer analysis of human conserved non-coding sequences , 2006, Nature.

[66]  C. Gieger,et al.  Risk variants for atrial fibrillation on chromosome 4q25 associate with ischemic stroke , 2008, Annals of neurology.

[67]  R. Hauer,et al.  Association of Human Connexin40 Gene Polymorphisms With Atrial Vulnerability as a Risk Factor for Idiopathic Atrial Fibrillation , 2004, Circulation research.

[68]  Calum A MacRae,et al.  Genetics of atrial fibrillation. , 2008, The Medical clinics of North America.

[69]  P. Donnelly,et al.  Replicating genotype–phenotype associations , 2007, Nature.

[70]  M. Daly,et al.  Genetic Mapping in Human Disease , 2008, Science.

[71]  Yi Zhang,et al.  Molecular Identification and Functional Roles of a Ca2+-activated K+ Channel in Human and Mouse Hearts* , 2003, Journal of Biological Chemistry.

[72]  P. Ellinor,et al.  Locus for Atrial Fibrillation Maps to Chromosome 6q14‐16 , 2003, Circulation.

[73]  Ricardo J Komotar,et al.  Genomewide Association Studies of Stroke. , 2009, Neurosurgery.

[74]  Keiko Tsuji,et al.  A novel SCN5A gain-of-function mutation M1875T associated with familial atrial fibrillation. , 2008, Journal of the American College of Cardiology.

[75]  Ralph B D'Agostino,et al.  Parental atrial fibrillation as a risk factor for atrial fibrillation in offspring. , 2004, JAMA.

[76]  J. Seidman,et al.  Missense mutations in the rod domain of the lamin A/C gene as causes of dilated cardiomyopathy and conduction-system disease. , 1999, The New England journal of medicine.

[77]  J. Rodríguez-Rey,et al.  Pitx2 Participates in the Late Phase of the Pathway Controlling Left-Right Asymmetry , 1998, Cell.

[78]  A. Prystupa,et al.  MinK gene polymorphism in the pathogenesis of lone atrial fibrillation. , 2006, Kardiologia polska.

[79]  Eric E. Smith,et al.  Variants conferring risk of atrial fibrillation on chromosome 4q25 , 2007, Nature.

[80]  P. Volders,et al.  Mapping a novel locus for familial atrial fibrillation on chromosome 10p11-q21. , 2007, Heart rhythm.

[81]  Ramon Brugada,et al.  Short QT Syndrome and Atrial Fibrillation Caused by Mutation in KCNH2 , 2005, Journal of cardiovascular electrophysiology.

[82]  L. Lai,et al.  Molecular genetics of atrial fibrillation. , 2008, Journal of the American College of Cardiology.

[83]  M. Gold,et al.  Long-term Outcomes in Individuals With Prolonged PR Interval or First-Degree Atrioventricular Block , 2010 .

[84]  Douglas L. Jones,et al.  Somatic mutations in the connexin 40 gene (GJA5) in atrial fibrillation. , 2006, The New England journal of medicine.

[85]  N. Laird,et al.  Meta-analysis in clinical trials. , 1986, Controlled clinical trials.

[86]  T. Kojima,et al.  Identification of CELSR1 as a susceptibility gene for ischemic stroke in Japanese individuals by a genome-wide association study. , 2009, Atherosclerosis.

[87]  J. Brugada,et al.  Identification of a genetic locus for familial atrial fibrillation. , 1997, The New England journal of medicine.

[88]  Marylyn D Ritchie,et al.  Renin-Angiotensin System Gene Polymorphisms and Atrial Fibrillation , 2004, Circulation.

[89]  A. Gori,et al.  Lone and secondary nonvalvular atrial fibrillation: role of a genetic susceptibility. , 2007, International journal of cardiology.

[90]  T. Tamaoki,et al.  A human alpha-fetoprotein enhancer-binding protein, ATBF1, contains four homeodomains and seventeen zinc fingers , 1991, Molecular and cellular biology.

[91]  Eric Boerwinkle,et al.  Variants in ZFHX3 are associated with atrial fibrillation in individuals of European ancestry , 2009, Nature Genetics.

[92]  Jamie I Vandenberg,et al.  Genes and atrial fibrillation: a new look at an old problem. , 2007, Circulation.

[93]  C. Antzelevitch,et al.  Atrial fibrillation and Brugada syndrome. , 2008, Journal of the American College of Cardiology.

[94]  J. Haines,et al.  Cardiac Sodium Channel (SCN5A) Variants Associated with Atrial Fibrillation , 2008, Circulation.

[95]  Christian Gieger,et al.  Genome-wide association study of PR interval , 2010, Nature Genetics.

[96]  Yusong He,et al.  A Kir2.1 gain-of-function mutation underlies familial atrial fibrillation. , 2005, Biochemical and biophysical research communications.

[97]  Joseph T. Glessner,et al.  From Disease Association to Risk Assessment: An Optimistic View from Genome-Wide Association Studies on Type 1 Diabetes , 2009, PLoS genetics.

[98]  Yutaka Miura,et al.  Frequent somatic mutations of the transcription factor ATBF1 in human prostate cancer , 2005, Nature Genetics.

[99]  Shaoqi Rao,et al.  Genome-Wide Linkage Scan Identifies a Novel Genetic Locus on Chromosome 5p13 for Neonatal Atrial Fibrillation Associated With Sudden Death and Variable Cardiomyopathy , 2004, Circulation.

[100]  J. Carey,et al.  Cloning and characterization of a novel bicoid-related homeobox transcription factor gene, RIEG, involved in Rieger syndrome , 1996, Nature Genetics.

[101]  Ying Wang,et al.  KCNQ1 gain-of-function mutation in familial atrial fibrillation. , 2003, Science.