Pacing a small cage: mutation and RNA viruses
暂无分享,去创建一个
Andrew Rambaut | Andy Gardner | Robert Belshaw | Oliver G Pybus | A. Gardner | O. Pybus | A. Rambaut | R. Belshaw
[1] R. Sanjuán,et al. The cost of replication fidelity in human immunodeficiency virus type 1 , 2007, Proceedings of the Royal Society B: Biological Sciences.
[2] M. Goodman,et al. Error-prone replication for better or worse. , 2004, Trends in microbiology.
[3] Manfred Eigen,et al. Error catastrophe and antiviral strategy , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[4] A. Kondrashov. Deleterious mutations and the evolution of sexual reproduction , 1988, Nature.
[5] Julie K. Pfeiffer,et al. A single mutation in poliovirus RNA-dependent RNA polymerase confers resistance to mutagenic nucleotide analogs via increased fidelity , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[6] S. Sarafianos,et al. Role of methionine 184 of human immunodeficiency virus type-1 reverse transcriptase in the polymerase function and fidelity of DNA synthesis. , 1996, Biochemistry.
[7] C. Wilke,et al. Evolution of mutational robustness. , 2003, Mutation research.
[8] J. J. Bull,et al. Theory of Lethal Mutagenesis for Viruses , 2007, Journal of Virology.
[9] O. Tenaillon,et al. Evolution of Mutational Robustness in an RNA Virus , 2005, PLoS biology.
[10] M. Eigen,et al. Emergence of the Hypercycle , 1979 .
[11] Claus O Wilke,et al. Quasispecies theory in the context of population genetics , 2005, BMC Evolutionary Biology.
[12] R. Sanjuán,et al. The cost of replication fidelity in an RNA virus. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[13] Peter Schuster,et al. A principle of natural self-organization , 1977, Naturwissenschaften.
[14] J. H. Strauss,et al. Recombinational history and molecular evolution of western equine encephalomyelitis complex alphaviruses , 1997, Journal of virology.
[15] Todd M. Allen,et al. Virus-specific cytotoxic T-lymphocyte responses select for amino-acid variation in simian immunodeficiency virus Env and Nef , 1999, Nature Medicine.
[16] Samuel Litwin,et al. Examining The Theory of Error Catastrophe , 2006, Journal of Virology.
[17] E. Domingo,et al. Foot-and-Mouth Disease Virus Mutant with Decreased Sensitivity to Ribavirin: Implications for Error Catastrophe , 2006, Journal of Virology.
[18] Marco Vignuzzi,et al. Ribavirin and lethal mutagenesis of poliovirus: molecular mechanisms, resistance and biological implications. , 2005, Virus research.
[19] Michael Lachmann,et al. Quasispecies Made Simple , 2005, PLoS Comput. Biol..
[20] E. Holmes,et al. A phylogenetic survey of recombination frequency in plant RNA viruses , 2006, Archives of Virology.
[21] A. Jetzt,et al. Human Immunodeficiency Virus Type 1 Recombination: Rate, Fidelity, and Putative Hot Spots , 2002, Journal of Virology.
[22] Christoph Adami,et al. Viral evolution under the pressure of an adaptive immune system: Optimal mutation rates for viral escape , 2002, Complex..
[23] J. Ziebuhr,et al. Nidovirales: Evolving the largest RNA virus genome , 2006, Virus Research.
[24] L. Mansky. In Vivo Analysis of Human T-Cell Leukemia Virus Type 1 Reverse Transcription Accuracy , 2000, Journal of Virology.
[25] F. Guirakhoo,et al. High Fidelity of Yellow Fever Virus RNA Polymerase , 2004, Journal of Virology.
[26] P. Klenerman,et al. Viral escape mechanisms – escapology taught by viruses , 2001, International journal of experimental pathology.
[27] E. Domingo,et al. Lack of evidence for proofreading mechanisms associated with an RNA virus polymerase. , 1992, Gene.
[28] Edward C. Holmes,et al. Rates of Molecular Evolution in RNA Viruses: A Quantitative Phylogenetic Analysis , 2002, Journal of Molecular Evolution.
[29] Edward C Holmes,et al. High rate of viral evolution associated with the emergence of carnivore parvovirus. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[30] Edward C Holmes,et al. Error thresholds and the constraints to RNA virus evolution , 2003, Trends in Microbiology.
[31] M. Eigen,et al. What is a quasispecies? , 2006, Current topics in microbiology and immunology.
[32] G. Wagner,et al. What is the difference between models of error thresholds and Muller's ratchet? , 1993 .
[33] J. Drake,et al. Mutation rates among RNA viruses. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[34] E. Domingo,et al. The quasispecies (extremely heterogeneous) nature of viral RNA genome populations: biological relevance--a review. , 1985, Gene.
[35] Andrew Rambaut,et al. The evolution of genome compression and genomic novelty in RNA viruses. , 2007, Genome research.
[36] A. Kondrashov,et al. Classification of hypotheses on the advantage of amphimixis. , 1993, The Journal of heredity.
[37] M. Eigen. Selforganization of matter and the evolution of biological macromolecules , 1971, Naturwissenschaften.
[38] Mario Recker,et al. The generation of influenza outbreaks by a network of host immune responses against a limited set of antigenic types , 2007, Proceedings of the National Academy of Sciences.
[39] Santiago F. Elena,et al. Adaptive Value of High Mutation Rates of RNA Viruses: Separating Causes from Consequences , 2005, Journal of Virology.
[40] Rafael Sanjuán,et al. The distribution of fitness effects caused by single-nucleotide substitutions in an RNA virus. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[41] M. Eigen,et al. The hypercycle. A principle of natural self-organization. Part A: Emergence of the hypercycle. , 1977, Die Naturwissenschaften.
[42] Rafael Sanjuán,et al. Mechanisms of genetic robustness in RNA viruses , 2006, EMBO reports.
[43] Rafael Sanjuán,et al. Epistasis correlates to genomic complexity , 2006, Proceedings of the National Academy of Sciences.
[44] M. Vignuzzi,et al. Quasispecies diversity determines pathogenesis through cooperative interactions in a viral population , 2006, Nature.
[45] M. Eigen,et al. The Hypercycle: A principle of natural self-organization , 2009 .
[46] J. Drake,et al. Rates of spontaneous mutation. , 1998, Genetics.
[47] Reuben S. Harris,et al. Retroviral restriction by APOBEC proteins , 2004, Nature Reviews Immunology.
[48] L. Reha-Krantz. Regulation of DNA polymerase exonucleolytic proofreading activity: studies of bacteriophage T4 "antimutator" DNA polymerases. , 1998, Genetics.
[49] P. Schuster,et al. Stationary mutant distributions and evolutionary optimization. , 1988, Bulletin of mathematical biology.
[50] Thomas Wiehe,et al. Model dependency of error thresholds: the role of fitness functions and contrasts between the finite and infinite sites models , 1997 .
[51] Sebastian Bonhoeffer,et al. Virus evolution: The importance of being erroneous , 2002, Nature.