Metabolic and Demographic Feedbacks Shape the Emergent Spatial Structure and Function of Microbial Communities
暂无分享,去创建一个
[1] J. Bull,et al. The Evolution of Cooperation , 2004, The Quarterly Review of Biology.
[2] D. Queller,et al. ESTIMATING RELATEDNESS USING GENETIC MARKERS , 1989, Evolution; international journal of organic evolution.
[3] Shihu Hu,et al. Anaerobic oxidation of methane coupled to nitrate reduction in a novel archaeal lineage , 2013, Nature.
[4] S. Séror,et al. Branched swarming patterns on a synthetic medium formed by wild-type Bacillus subtilis strain 3610: detection of different cellular morphologies and constellations of cells as the complex architecture develops. , 2004, Microbiology.
[5] William R. Harcombe,et al. NOVEL COOPERATION EXPERIMENTALLY EVOLVED BETWEEN SPECIES , 2010, Evolution; international journal of organic evolution.
[6] R. Kassen. The experimental evolution of specialists, generalists, and the maintenance of diversity , 2002 .
[7] V. Cooper,et al. Ecological succession in long-term experimentally evolved biofilms produces synergistic communities , 2011, The ISME Journal.
[8] David A. Stahl,et al. Rapid evolution of stability and productivity at the origin of a microbial mutualism , 2010, Proceedings of the National Academy of Sciences.
[9] S. Molin,et al. Spatial Organization of Microbial Biofilm Communities , 2000, Microbial Ecology.
[10] J. Bronstein. Our Current Understanding of Mutualism , 1994, The Quarterly Review of Biology.
[11] Hassan Sakhtah,et al. Convergent evolution of hyperswarming leads to impaired biofilm formation in pathogenic bacteria. , 2013, Cell reports.
[12] S. Frank. Genetics of mutualism: the evolution of altruism between species. , 1994, Journal of theoretical biology.
[13] R. Rosenzweig,et al. Microbial evolution in a simple unstructured environment: genetic differentiation in Escherichia coli. , 1994, Genetics.
[14] G Stephanopoulos,et al. Coexistence of S. cerevisiae and E. coli in chemostat under substrate competition and product inhibition , 1986, Biotechnology and bioengineering.
[15] V. Bucci,et al. The Evolution of Bacteriocin Production in Bacterial Biofilms , 2011, The American Naturalist.
[16] J. Kreft,et al. Biofilms promote altruism. , 2004, Microbiology.
[17] Martin A. Nowak,et al. Spatial structure often inhibits the evolution of cooperation in the snowdrift game , 2022 .
[18] Wenying Shou,et al. Strong inter-population cooperation leads to partner intermixing in microbial communities , 2013, eLife.
[19] J. Ghigo,et al. Multi-species biofilms: how to avoid unfriendly neighbors. , 2012, FEMS microbiology reviews.
[20] P. Kolenbrander,et al. Mutualistic Biofilm Communities Develop with Porphyromonas gingivalis and Initial, Early, and Late Colonizers of Enamel , 2009, Journal of bacteriology.
[21] Carey D. Nadell,et al. Emergence of Spatial Structure in Cell Groups and the Evolution of Cooperation , 2010, PLoS Comput. Biol..
[22] C. van Delden,et al. Swarming of Pseudomonas aeruginosa Is Dependent on Cell-to-Cell Signaling and Requires Flagella and Pili , 2000, Journal of bacteriology.
[23] Measuring the Costs of Microbial Mutualism , 2011 .
[24] A. Phillimore,et al. Species Interactions Alter Evolutionary Responses to a Novel Environment , 2012, PLoS biology.
[25] R. Lenski,et al. Tests of Ecological Mechanisms Promoting the Stable Coexistence of Two Bacterial Genotypes , 1996 .
[26] P. Stewart,et al. Quantitative analysis of biofilm thickness variability , 1995, Biotechnology and bioengineering.
[27] A. Griffin,et al. Cooperation and Competition Between Relatives , 2002, Science.
[28] K R Foster,et al. A general model for the evolution of mutualisms , 2006, Journal of evolutionary biology.
[29] R. Connor. The Benefits of Mutualism: A Conceptual Framework , 1995 .
[30] J. Gordon,et al. A humanized gnotobiotic mouse model of host-archaeal-bacterial mutualism. , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[31] J. Choi,et al. Defined spatial structure stabilizes a synthetic multispecies bacterial community , 2008, Proceedings of the National Academy of Sciences.
[32] Paul B. Rainey,et al. Evolution of species interactions in a biofilm community , 2007, Nature.
[33] S. West,et al. Spatial Structure and Interspecific Cooperation: Theory and an Empirical Test Using the Mycorrhizal Mutualism , 2012, The American Naturalist.
[34] K. Foster,et al. The Evolution of Mutualism in Gut Microbiota Via Host Epithelial Selection , 2012, PLoS biology.
[35] K. Foster,et al. A molecular mechanism that stabilizes cooperative secretions in Pseudomonas aeruginosa , 2011, Molecular microbiology.
[36] J. Seoane,et al. Growth dependence of conjugation explains limited plasmid invasion in biofilms: an individual-based modelling study. , 2011, Environmental microbiology.
[37] J. Hofkens,et al. Architecture and spatial organization in a triple-species bacterial biofilm synergistically degrading the phenylurea herbicide linuron. , 2008, FEMS microbiology ecology.
[38] Ehud Banin,et al. Multi-species biofilms: living with friendly neighbors. , 2012, FEMS microbiology reviews.
[39] Sam P. Brown,et al. From Metabolism to Ecology: Cross-Feeding Interactions Shape the Balance between Polymicrobial Conflict and Mutualism , 2012, The American Naturalist.
[40] M. Doebeli,et al. The evolution of interspecific mutualisms. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[41] Victoria J. Orphan,et al. Diverse syntrophic partnerships from deep-sea methane vents revealed by direct cell capture and metagenomics , 2008, Proceedings of the National Academy of Sciences.
[42] K. Foster,et al. Cooperation and conflict in microbial biofilms , 2007, Proceedings of the National Academy of Sciences.
[43] Søren Molin,et al. Metabolic Commensalism and Competition in a Two-Species Microbial Consortium , 2002, Applied and Environmental Microbiology.
[44] A. Buckling,et al. The interplay between microevolution and community structure in microbial populations. , 2013, Current opinion in biotechnology.
[45] S. Frank. Foundations of Social Evolution , 2019 .
[46] J. Costerton,et al. Microbial Biofilms , 2011 .
[47] J. Keasling,et al. Commensal Interactions in a Dual-Species Biofilm Exposed to Mixed Organic Compounds , 2000, Applied and Environmental Microbiology.
[48] Bernhard Schink,et al. Synergistic interactions in the microbial world , 2002, Antonie van Leeuwenhoek.
[49] Cristian Picioreanu,et al. iDynoMiCS: next-generation individual-based modelling of biofilms. , 2011, Environmental microbiology.
[50] S. Molin,et al. Role of commensal relationships on the spatial structure of a surface-attached microbial consortium. , 2000, Environmental microbiology.
[51] M. Whiteley,et al. A Novel Exclusion Mechanism for Carbon Resource Partitioning in Aggregatibacter actinomycetemcomitans , 2007, Journal of bacteriology.
[52] K. Rumbaugh,et al. Metabolite Cross-Feeding Enhances Virulence in a Model Polymicrobial Infection , 2011, PLoS pathogens.
[53] C. Fuqua,et al. Quorum sensing and motility mediate interactions between Pseudomonas aeruginosa and Agrobacterium tumefaciens in biofilm cocultures. , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[54] J. Strassmann,et al. Structured growth and genetic drift raise relatedness in the social amoeba Dictyostelium discoideum , 2012, Biology Letters.
[55] Sam P. Brown,et al. Molecular and regulatory properties of a public good shape the evolution of cooperation , 2010, Proceedings of the National Academy of Sciences.
[56] Sara Mitri,et al. Social evolution in multispecies biofilms , 2011, Proceedings of the National Academy of Sciences.
[57] D. Queller,et al. Does population viscosity promote kin selection? , 1992, Trends in ecology & evolution.
[58] M. Baalen,et al. Self-structuring in spatial evolutionary ecology. , 2008, Ecology letters.
[59] Frances H. Arnold,et al. Self-Organization, Layered Structure, and Aggregation Enhance Persistence of a Synthetic Biofilm Consortium , 2011, PloS one.