Solvation in modified water models: towards understanding hydrophobic effects

The solvation of small hydrophobic solutes, modelled as hard spheres or Lennard-Jones particles, is characterized in several modified water liquids. In the hybrid family of liquids the SPC/E model is partially transformed to a Lennard-Jones liquid with the same number density. In this family, hydrophobic solutes become less soluble as the liquid structure becomes more close packed. In the bent family of models the network structure is altered by geometrical changes from SPC/E which increase the solubility of hydrophobic groups. Solvophobicity in the isotropic model, which has the same radial distribution function as SPC/E water by construction, is greater than in SPC/E water. This shows the importance of three-body correlations. In addition to excess chemical potentials, contact densities and the agreement with the Gaussian distributions predicted by information theory are investigated. Dielectric constants and surface tensions have been determined approximately and are used in the discussion of the results.

[1]  T. Straatsma,et al.  THE MISSING TERM IN EFFECTIVE PAIR POTENTIALS , 1987 .

[2]  W. V. van Gunsteren,et al.  A fast SHAKE algorithm to solve distance constraint equations for small molecules in molecular dynamics simulations , 2001 .

[3]  D. Chandler,et al.  Theory of the hydrophobic effect , 1977 .

[4]  Shekhar Garde,et al.  Temperature dependence of hydrophobic hydration and entropy convergence in an isotropic model of water , 2001 .

[5]  G. Patey,et al.  Fluids of polarizable hard spheres with dipoles and tetrahedral quadrupoles Integral equation results with application to liquid water , 1982 .

[6]  K. Dill Dominant forces in protein folding. , 1990, Biochemistry.

[7]  C. Vega,et al.  The melting point of ice Ih for common water models calculated from direct coexistence of the solid-liquid interface. , 2006, The Journal of chemical physics.

[8]  P. Debenedetti,et al.  Computational investigation of order, structure, and dynamics in modified water models. , 2005, The journal of physical chemistry. B.

[9]  J. Banavar,et al.  Computer Simulation of Liquids , 1988 .

[10]  A. Pohorille,et al.  Theory of hydrophobicity: transient cavities in molecular liquids. , 1992, Proceedings of the National Academy of Sciences of the United States of America.

[11]  S. Rick A reoptimization of the five-site water potential (TIP5P) for use with Ewald sums. , 2004, The Journal of chemical physics.

[12]  F. Stillinger,et al.  An orientational perturbation theory for pure liquid water , 1993 .

[13]  Pressure calculation in polar and charged systems using Ewald summation: Results for the extended simple point charge model of water , 1998, physics/9806038.

[14]  Robert C. Weast,et al.  Handbook of chemistry and physics : a readyreference book of chemical and physical data , 1972 .

[15]  Model of a fluid at small and large length scales and the hydrophobic effect. , 2001, Physical review. E, Statistical, nonlinear, and soft matter physics.

[16]  P.-L. Chau,et al.  A new order parameter for tetrahedral configurations , 1998 .

[17]  H. C. Andersen Rattle: A “velocity” version of the shake algorithm for molecular dynamics calculations , 1983 .

[18]  M. Born Volumen und Hydratationswärme der Ionen , 1920 .

[19]  Zhenyu Yan,et al.  Structural order for one-scale and two-scale potentials. , 2005, Physical review letters.

[20]  Frank H. Stillinger,et al.  Structure in aqueous solutions of nonpolar solutes from the standpoint of scaled-particle theory , 1973 .

[21]  R. Lynden-Bell,et al.  Is the hydrophobic effect unique to water? The relation between solvation properties and network structure in water and modified water models , 2001 .

[22]  R. A. McGill,et al.  A quantitative measure of solvent solvophobic effect , 1988 .

[23]  G. Hummer,et al.  Cavity Expulsion and Weak Dewetting of Hydrophobic Solutes in Water , 1998 .

[24]  G. Ciccotti,et al.  Numerical Integration of the Cartesian Equations of Motion of a System with Constraints: Molecular Dynamics of n-Alkanes , 1977 .

[25]  A. Soper Tests of the empirical potential structure refinement method and a new method of application to neutron diffraction data on water , 2001 .

[26]  Greg L. Hura,et al.  Development of an improved four-site water model for biomolecular simulations: TIP4P-Ew. , 2004, The Journal of chemical physics.

[27]  T. Head-Gordon,et al.  A New Solvent Model for Hydrophobic Association in Water I. Thermodynamics , 1995 .

[28]  Berend Smit,et al.  Understanding molecular simulation: from algorithms to applications , 1996 .

[29]  B. Widom,et al.  Some Topics in the Theory of Fluids , 1963 .

[30]  A. Pohorille,et al.  An information theory model of hydrophobic interactions. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[31]  H E Stanley,et al.  Metastable liquid-liquid phase transition in a single-component system with only one crystal phase and no density anomaly. , 2001, Physical review. E, Statistical, nonlinear, and soft matter physics.

[32]  S. Nosé A unified formulation of the constant temperature molecular dynamics methods , 1984 .

[33]  Head-Gordon,et al.  Perturbational view of inherent structures in water. , 1993, Physical review. E, Statistical physics, plasmas, fluids, and related interdisciplinary topics.

[34]  Pablo G. Debenedetti,et al.  Relationship between structural order and the anomalies of liquid water , 2001, Nature.

[35]  A. Pohorille,et al.  Cavities in molecular liquids and the theory of hydrophobic solubilities. , 1990, Journal of the American Chemical Society.

[36]  Hoover,et al.  Canonical dynamics: Equilibrium phase-space distributions. , 1985, Physical review. A, General physics.

[37]  M. Klein,et al.  Nosé-Hoover chains : the canonical ensemble via continuous dynamics , 1992 .

[38]  B. Lee,et al.  Solvent reorganization contribution to the transfer thermodynamics of small nonpolar molecules , 1991, Biopolymers.