Characterization of 24-well microtiter plate reactors for a complex multistep bioconversion: from sitosterol to androstenedione.

Microtiter plates are commonly used for screening purposes and one-pot biotransformations. Nonetheless, there are scarce systematic studies focused on the application of these systems to complex whole cell multistep bioconversions, which typically require prolonged incubation periods, and on the evaluation of the reproducibility of data generated in such shaken miniature reactors. The present study aims to contribute to fill in this gap. The model system selected was the side-chain cleavage of beta-sitosterol performed by whole cells of Mycobacterium sp. NRRL B-3805 in 24-well microtiter plates. Reproducibility of the data was assessed within the 24 wells of the microtiter plate as well as matching different plates placed in different positions on the shaking platform. Results show the suitability of microtiter plates with proper oxygen and pH monitoring capabilities to carry out complex multistep bioconversion using relatively slow growing bacteria. Reproducibility levels are in the range of an interval of confidence of 92%.

[1]  J Büchs,et al.  Characterisation of operation conditions and online monitoring of physiological culture parameters in shaken 24-well microtiter plates , 2005, Bioprocess and biosystems engineering.

[2]  C. Carvalho,et al.  Solvent toxicity in organic-aqueous systems analysed by multivariate analysis , 2004 .

[3]  Robert Hermann,et al.  Methods for Intense Aeration, Growth, Storage, and Replication of Bacterial Strains in Microtiter Plates , 2000, Applied and Environmental Microbiology.

[4]  Uwe Dingerdissen,et al.  Rapid Evaluation of Oxygen and Water Permeation through Microplate Sealing Tapes , 2003, Biotechnology progress.

[5]  Oxygen limitation is a pitfall during screening for industrial strains , 2006, Applied Microbiology and Biotechnology.

[6]  Ingo Klimant,et al.  Integrated optical sensing of dissolved oxygen in microtiter plates: A novel tool for microbial cultivation , 2003, Biotechnology and bioengineering.

[7]  A. Kiener,et al.  Industrial biocatalysis today and tomorrow , 2001, Nature.

[8]  H. Pinheiro,et al.  Optimization of androstenedione production in an organic–aqueous two-liquid phase system , 2004 .

[9]  Christoph Wittmann,et al.  Characterization and application of an optical sensor for quantification of dissolved O2 in shake-flasks , 2003, Biotechnology Letters.

[10]  J. Büchs,et al.  Characterization of gas-liquid mass transfer phenomena in microtiter plates. , 2003, Biotechnology and bioengineering.

[11]  W. Duetz,et al.  Microtiter plates as mini-bioreactors: miniaturization of fermentation methods. , 2007, Trends in microbiology.

[12]  G J Lye,et al.  Scale‐up of Escherichia coli growth and recombinant protein expression conditions from microwell to laboratory and pilot scale based on matched kLa , 2008, Biotechnology and bioengineering.

[13]  J. Büchs,et al.  Characterisation of the gas-liquid mass transfer in shaking bioreactors. , 2001, Biochemical engineering journal.

[14]  Gary J. Lye,et al.  Engineering characterisation of a single well from 24-well and 96-well microtitre plates , 2008 .

[15]  P. Fernandes,et al.  On the feasibility of the microscale approach for a multistep biotransformation: sitosterol side chain cleavage , 2007 .

[16]  Pedro Fernandes,et al.  Microlitre/millilitre shaken bioreactors in fermentative and biotransformation processes – a review , 2006 .

[17]  Dirk Weuster-Botz,et al.  Miniature bioreactors for automated high‐throughput bioprocess design (HTBD): reproducibility of parallel fed‐batch cultivations with Escherichia coli , 2005, Biotechnology and applied biochemistry.

[18]  Dirk Weuster-Botz,et al.  Parallel-operated stirred-columns for microbial process development , 2002 .

[19]  J Büchs,et al.  Micro-bioreactors for fed-batch fermentations with integrated online monitoring and microfluidic devices. , 2009, Biosensors & bioelectronics.

[20]  Hartmut F. Zimmermann,et al.  Evaluation of the applicability of backscattered light measurements to the determination of microbial cell densities in microtiter plates , 2006, Analytical and bioanalytical chemistry.

[21]  Jay D Keasling,et al.  Microbioreactor arrays with parametric control for high‐throughput experimentation , 2004, Biotechnology and bioengineering.

[22]  J Büchs,et al.  Introduction to advantages and problems of shaken cultures. , 2001, Biochemical engineering journal.

[23]  F Baganz,et al.  Quantification of power consumption and oxygen transfer characteristics of a stirred miniature bioreactor for predictive fermentation scale‐up , 2008, Biotechnology and bioengineering.

[24]  Peter Neubauer,et al.  Microbial Cell Factories a New Wireless System for Decentralised Measurement of Physiological Parameters from Shake Flasks , 2006 .

[25]  Martina Micheletti,et al.  Microscale bioprocess optimisation. , 2006, Current opinion in biotechnology.

[26]  Wouter A. Duetz,et al.  Oxygen transfer by orbital shaking of square vessels and deepwell microtiter plates of various dimensions , 2004 .

[27]  A. Szentirmai Microbial physiology of sidechain degradation of sterols , 1990, Journal of Industrial Microbiology.

[28]  M. Pons,et al.  Behaviour of Mycobacterium sp. NRRL B-3805 whole cells in aqueous, organic-aqueous and organic media studied by fluorescence microscopy , 2004, Applied Microbiology and Biotechnology.

[29]  C. Carvalho,et al.  Principal component analysis applied to bacterial cell behaviour in the presence of organic solvents , 2004 .

[30]  Gary J. Lye,et al.  Modelling surface aeration rates in shaken microtitre plates using dimensionless groups , 2005 .

[31]  Carla C. C. R. de Carvalho,et al.  Degradation of hydrocarbons and alcohols by Rhodococcus erythropolis DCL14: A comparison in scale performance , 2007 .

[32]  J Büchs,et al.  Quasi-continuous combined scattered light and fluorescence measurements: a novel measurement technique for shaken microtiter plates. , 2005, Biotechnology and bioengineering.

[33]  John M Woodley,et al.  Accelerated design of bioconversion processes using automated microscale processing techniques. , 2003, Trends in biotechnology.

[34]  Hu Zhang,et al.  Computational‐fluid‐dynamics (CFD) analysis of mixing and gas–liquid mass transfer in shake flasks , 2005, Biotechnology and applied biochemistry.

[35]  Carla C. C. R. de Carvalho,et al.  Mycobacterium sp., Rhodococcus erythropolis, and Pseudomonas putida behavior in the presence of organic solvents , 2004, Microscopy research and technique.

[36]  M. Reuss,et al.  High-cell-density fermentation for production of L-N-carbamoylase using an expression system based on the Escherichia coli rhaBAD promoter. , 2001, Biotechnology and bioengineering.

[37]  Sergey M Borisov,et al.  Multiplex bacterial growth monitoring in 24‐well microplates using a dual optical sensor for dissolved oxygen and pH , 2008, Biotechnology and bioengineering.

[38]  A. Szentirmai,et al.  Propionyl-CoA elimination may be a rate-determining step of selective cleavage of sterol side chain , 1993, Biotechnology Letters.

[39]  B. Hutter,et al.  Evaluation of OxoPlate for Real-Time Assessment of Antibacterial Activities , 2003, Current Microbiology.

[40]  D Weuster-Botz,et al.  Development, parallelization, and automation of a gas-inducing milliliter-scale bioreactor for high-throughput bioprocess design (HTBD). , 2005, Biotechnology and bioengineering.