2D and 3D MALDI-imaging: conceptual strategies for visualization and data mining.
暂无分享,去创建一个
Stefan Heldmann | Bernd Fischer | Herbert Thiele | Dennis Trede | Jan Strehlow | Stefan Wirtz | Wolfgang Dreher | Judith Berger | Janina Oetjen | Jan Hendrik Kobarg | Peter Maass | J. H. Kobarg | J. Oetjen | D. Trede | P. Maass | B. Fischer | W. Dreher | S. Heldmann | H. Thiele | S. Wirtz | J. Strehlow | J. Berger
[1] Chen Sagiv,et al. Magnification of Label Maps With a Topology-Preserving Level-Set Method , 2012, IEEE Transactions on Image Processing.
[2] Stefan Heldmann,et al. Exploring three-dimensional matrix-assisted laser desorption/ionization imaging mass spectrometry data: three-dimensional spatial segmentation of mouse kidney. , 2012, Analytical chemistry.
[3] Theodore Alexandrov,et al. On the Importance of Mathematical Methods for Analysis of MALDI-Imaging Mass Spectrometry Data , 2012, J. Integr. Bioinform..
[4] T. Alexandrov,et al. Super-resolution segmentation of imaging mass spectrometry data: Solving the issue of low lateral resolution. , 2011, Journal of proteomics.
[5] Kurt Zatloukal,et al. Histological Assessment of PAXgene Tissue Fixation and Stabilization Reagents , 2011, PloS one.
[6] M. R. Groseclose,et al. MALDI imaging mass spectrometry: bridging biology and chemistry in drug development. , 2011, Bioanalysis.
[7] Theodore Alexandrov,et al. Efficient spatial segmentation of large imaging mass spectrometry datasets with spatially aware clustering , 2011, Bioinform..
[8] Mia K Markey,et al. Recent advances in computational analysis of mass spectrometry for proteomic profiling. , 2011, Journal of mass spectrometry : JMS.
[9] S. Rauser,et al. Normalization in MALDI-TOF imaging datasets of proteins: practical considerations , 2011, Analytical and bioanalytical chemistry.
[10] Jeramie D Watrous,et al. The evolving field of imaging mass spectrometry and its impact on future biological research. , 2011, Journal of mass spectrometry : JMS.
[11] Detlev Suckau,et al. Approaching MALDI molecular imaging for clinical proteomic research: current state and fields of application , 2010, Expert review of proteomics.
[12] Theodore Alexandrov,et al. Spatial segmentation of imaging mass spectrometry data with edge-preserving image denoising and clustering. , 2010, Journal of proteome research.
[13] Kurt Zatloukal,et al. Proteomic analysis of PAXgene-fixed tissues. , 2010, Journal of proteome research.
[14] Hyunjin Shin,et al. Wavelet-based adaptive denoising and baseline correction for MALDI TOF MS. , 2010, Omics : a journal of integrative biology.
[15] Mats Borén,et al. Stopping the clock on proteomic degradation by heat treatment at the point of tissue excision , 2010, Proteomics.
[16] Bernd Schneider,et al. Symbiotic Streptomycetes provide antibiotic combination prophylaxis for wasp offspring. , 2010, Nature chemical biology.
[17] Detlev Suckau,et al. Classification of HER2 receptor status in breast cancer tissues by MALDI imaging mass spectrometry. , 2010, Journal of proteome research.
[18] Jan Modersitzki,et al. FAIR: Flexible Algorithms for Image Registration , 2009 .
[19] Pieter C. Dorrestein,et al. Translating metabolic exchange with imaging mass spectrometry , 2009, Nature chemical biology.
[20] Jonathan Stauber,et al. Imaging mass spectrometry: Hype or hope? , 2009, Journal of the American Society for Mass Spectrometry.
[21] Markus Grasmair,et al. Locally Adaptive Total Variation Regularization , 2009, SSVM.
[22] Maxence Wisztorski,et al. MALDI Imaging Mass Spectrometry , 2009, Molecular & Cellular Proteomics.
[23] D. Lorenz,et al. Greedy solution of ill-posed problems: error bounds and exact inversion , 2009, 0904.0154.
[24] Fred A Hamprecht,et al. Concise representation of mass spectrometry images by probabilistic latent semantic analysis. , 2008, Analytical chemistry.
[25] Sören-Oliver Deininger,et al. MALDI imaging combined with hierarchical clustering as a new tool for the interpretation of complex human cancers. , 2008, Journal of proteome research.
[26] Philip S. Yu,et al. Top 10 algorithms in data mining , 2007, Knowledge and Information Systems.
[27] Gerhard Jakse,et al. Identifying prostate carcinoma by MALDI-Imaging. , 2007, International journal of molecular medicine.
[28] Stefan Heldmann,et al. International Journal of Computer Vision c ○ 2006 Springer Science + Business Media, LLC. Manufactured in the United States. DOI: 10.1007/s11263-006-9780-x Image Registration of Sectioned Brains , 2004 .
[29] R. Caprioli,et al. Identification of proteins directly from tissue: in situ tryptic digestions coupled with imaging mass spectrometry. , 2007, Journal of mass spectrometry : JMS.
[30] D. Donoho,et al. Does median filtering truly preserve edges better than linear filtering , 2006, math/0612422.
[31] Eldad Haber,et al. Intensity Gradient Based Registration and Fusion of Multi-modal Images , 2006, MICCAI.
[32] Cordelia Schmid,et al. High-dimensional data clustering , 2006, Comput. Stat. Data Anal..
[33] M. Stoeckli,et al. Spatial and spectral correlations in MALDI mass spectrometry images by clustering and multivariate analysis. , 2005, Analytical chemistry.
[34] Jonathan V Sweedler,et al. Imaging mass spectrometry: fundamentals and applications to drug discovery. , 2005, Drug discovery today.
[35] Jan Modersitzki,et al. Numerical Methods for Image Registration , 2004 .
[36] Yu Shyr,et al. Proteomic patterns of tumour subsets in non-small-cell lung cancer , 2003, The Lancet.
[37] Max A. Viergever,et al. Mutual-information-based registration of medical images: a survey , 2003, IEEE Transactions on Medical Imaging.
[38] Michelle L. Reyzer,et al. Direct tissue analysis using matrix-assisted laser desorption/ionization mass spectrometry: practical aspects of sample preparation. , 2003, Journal of mass spectrometry : JMS.
[39] Jerry L Prince,et al. A Topology Preserving Level Set Method for Geometric Deformable Models , 2003, IEEE Trans. Pattern Anal. Mach. Intell..
[40] M. Stoeckli,et al. Imaging mass spectrometry: A new technology for the analysis of protein expression in mammalian tissues , 2001, Nature Medicine.
[41] W Dreher,et al. A fast variant of (1)H spectroscopic U-FLARE imaging using adjusted chemical shift phase encoding. , 2000, Journal of magnetic resonance.
[42] R. Caprioli,et al. Molecular imaging of biological samples: localization of peptides and proteins using MALDI-TOF MS. , 1997, Analytical chemistry.
[43] Guy Marchal,et al. Multimodality image registration by maximization of mutual information , 1997, IEEE Transactions on Medical Imaging.
[44] Arthur W. Toga,et al. A 3D digital map of rat brain , 1995, Brain Research Bulletin.
[45] Paul A. Viola,et al. Alignment by Maximization of Mutual Information , 1995, Proceedings of IEEE International Conference on Computer Vision.
[46] Philip Gremillet,et al. Dedicated image analysis techniques for three-dimensional reconstruction from serial sections in electron microscopy , 1991, Machine Vision and Applications.
[47] J. F. Bradshaw,et al. The principal axes transformation--a method for image registration. , 1990, Journal of nuclear medicine : official publication, Society of Nuclear Medicine.
[48] J Hennig,et al. RARE imaging: A fast imaging method for clinical MR , 1986, Magnetic resonance in medicine.
[49] W. T. Dixon. Simple proton spectroscopic imaging. , 1984, Radiology.
[50] Orlando Guntinas-Lichius,et al. MALDI-imaging segmentation is a powerful tool for spatial functional proteomic analysis of human larynx carcinoma , 2012, Journal of Cancer Research and Clinical Oncology.
[51] Benoit M Dawant,et al. Integrating spatially resolved three-dimensional MALDI IMS with in vivo magnetic resonance imaging , 2008, Nature Methods.
[52] M. Nikolova. An Algorithm for Total Variation Minimization and Applications , 2004 .
[53] Jean Serra,et al. Image Analysis and Mathematical Morphology , 1983 .