Prolinks: a database of protein functional linkages derived from coevolution
暂无分享,去创建一个
Matteo Pellegrini | David Eisenberg | Peter M Bowers | Todd O Yeates | D. Eisenberg | M. Thompson | M. Pellegrini | T. Yeates | P. Bowers | J. Fierro | Michael J. Thompson | Mike J Thompson | Joe Fierro | Joe Fierro
[1] Mark D'Souza,et al. Use of contiguity on the chromosome to predict functional coupling , 1998, Silico Biol..
[2] Ioannis Xenarios,et al. DIP, the Database of Interacting Proteins: a research tool for studying cellular networks of protein interactions , 2002, Nucleic Acids Res..
[3] C. Deane,et al. Protein Interactions , 2002, Molecular & Cellular Proteomics.
[4] B. Snel,et al. Conservation of gene order: a fingerprint of proteins that physically interact. , 1998, Trends in biochemical sciences.
[5] D. Eisenberg,et al. Protein function in the post-genomic era , 2000, Nature.
[6] D. Eisenberg,et al. Assigning protein functions by comparative genome analysis: protein phylogenetic profiles. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[7] Charles DeLisi,et al. Predictome: a database of putative functional links between proteins , 2002, Nucleic Acids Res..
[8] D. Eisenberg,et al. Inference of protein function and protein linkages in Mycobacterium tuberculosis based on prokaryotic genome organization: a combined computational approach , 2003, Genome Biology.
[9] M. Pellegrini,et al. Computational method to assign microbial genes to pathways , 2001, Journal of cellular biochemistry. Supplement.
[10] Warren C. Lathe,et al. Predicting protein function by genomic context: quantitative evaluation and qualitative inferences. , 2000, Genome research.
[11] E. Marcotte,et al. Predicting functional linkages from gene fusions with confidence. , 2002, Applied bioinformatics.
[12] D. Eisenberg,et al. Detecting protein function and protein-protein interactions from genome sequences. , 1999, Science.
[13] Anton J. Enright,et al. Protein interaction maps for complete genomes based on gene fusion events , 1999, Nature.
[14] T. Jenssen,et al. A literature network of human genes for high-throughput analysis of gene expression , 2001, Nature Genetics.
[15] P. Bork,et al. Measuring genome evolution. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[16] R. Overbeek,et al. The use of gene clusters to infer functional coupling. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[17] Simon Kasif,et al. Identification of functional links between genes using phylogenetic profiles , 2003, Bioinform..
[18] M. Vidal,et al. Identification of potential interaction networks using sequence-based searches for conserved protein-protein interactions or "interologs". , 2001, Genome research.
[19] E. Marcotte,et al. Computational genetics: finding protein function by nonhomology methods. , 2000, Current opinion in structural biology.
[20] D. Eisenberg,et al. A combined algorithm for genome-wide prediction of protein function , 1999, Nature.
[21] Julio Collado-Vides,et al. A powerful non-homology method for the prediction of operons in prokaryotes , 2002, ISMB.
[22] Christian von Mering,et al. STRING: a database of predicted functional associations between proteins , 2003, Nucleic Acids Res..
[23] Peter D. Karp,et al. The EcoCyc Database , 2002, Nucleic Acids Res..
[24] D. Lipman,et al. A genomic perspective on protein families. , 1997, Science.
[25] M. Pellegrini. Computational methods for protein function analysis. , 2001, Current opinion in chemical biology.
[26] S. Salzberg,et al. Prediction of operons in microbial genomes. , 2001, Nucleic acids research.