Extended temperature-accelerated dynamics: enabling long-time full-scale modeling of large rare-event systems.

A new method, the Extended Temperature-Accelerated Dynamics (XTAD), is introduced for modeling long-timescale evolution of large rare-event systems. The method is based on the Temperature-Accelerated Dynamics approach [M. Sørensen and A. Voter, J. Chem. Phys. 112, 9599 (2000)], but uses full-scale parallel molecular dynamics simulations to probe a potential energy surface of an entire system, combined with the adaptive on-the-fly system decomposition for analyzing the energetics of rare events. The method removes limitations on a feasible system size and enables to handle simultaneous diffusion events, including both large-scale concerted and local transitions. Due to the intrinsically parallel algorithm, XTAD not only allows studies of various diffusion mechanisms in solid state physics, but also opens the avenue for atomistic simulations of a range of technologically relevant processes in material science, such as thin film growth on nano- and microstructured surfaces.

[1]  Blas P. Uberuaga,et al.  Temperature accelerated dynamics study of migration process of oxygen defects in UO2 , 2009 .

[2]  G. Vineyard Frequency factors and isotope effects in solid state rate processes , 1957 .

[3]  G. Henkelman,et al.  Improved tangent estimate in the nudged elastic band method for finding minimum energy paths and saddle points , 2000 .

[4]  M. Parrinello,et al.  From metadynamics to dynamics. , 2013, Physical review letters.

[5]  A. Voter,et al.  Closing the gap between experiment and theory: crystal growth by temperature accelerated dynamics. , 2001, Physical review letters.

[6]  A. Voter,et al.  Closing the Gap between Experiment and Theory , 2001 .

[7]  J. B. Adams,et al.  EAM study of surface self-diffusion of single adatoms of fcc metals Ni, Cu, Al, Ag, Au, Pd, and Pt , 1991 .

[8]  T. Rahman,et al.  Diffusion barriers for Ag and Cu adatoms on the terraces and step edges on Cu(100) and Ag(100): An ab initio study , 2009 .

[9]  Foiles,et al.  Embedded-atom-method functions for the fcc metals Cu, Ag, Au, Ni, Pd, Pt, and their alloys. , 1986, Physical review. B, Condensed matter.

[10]  A. Voter,et al.  Temperature-accelerated dynamics for simulation of infrequent events , 2000 .

[11]  L. Khriachtchev,et al.  HArF in solid argon revisited: transition from unstable to stable configuration. , 2009, Journal of Physical Chemistry A.

[12]  B. Uberuaga,et al.  Radiation damage and evolution of radiation-induced defects in Er2O3 bixbyite , 2009, Journal of physics. Condensed matter : an Institute of Physics journal.

[13]  Jacques G. Amar,et al.  Growth instability in Cu multilayer films due to fast edge/corner diffusion , 2005 .

[14]  A. Voter Hyperdynamics: Accelerated Molecular Dynamics of Infrequent Events , 1997 .

[15]  A. Voter,et al.  Structure and mobility of radiation-induced defects in MgO , 2007 .

[16]  G. Henkelman,et al.  A climbing image nudged elastic band method for finding saddle points and minimum energy paths , 2000 .

[17]  Axel van de Walle,et al.  Accelerated molecular dynamics through stochastic iterations and collective variable based basin identification , 2013 .

[18]  Steve Plimpton,et al.  Fast parallel algorithms for short-range molecular dynamics , 1993 .

[19]  Arthur F Voter,et al.  Vacancy formation and strain in low-temperature Cu/Cu(100) growth. , 2008, Physical review letters.

[20]  Y. Shim,et al.  Localized saddle-point search and application to temperature-accelerated dynamics. , 2013, The Journal of chemical physics.

[21]  A. Voter Parallel replica method for dynamics of infrequent events , 1998 .

[22]  Jacques G. Amar,et al.  Reaching extended length scales and time scales in atomistic simulations via spatially parallel temperature-accelerated dynamics , 2007 .

[23]  J. A. Sprague,et al.  Simulation of growth of Cu on Ag(001) at experimental deposition rates , 2002 .