Applications of Yeast Surface Display for Protein Engineering.
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[1] G. P. Smith,et al. Filamentous fusion phage: novel expression vectors that display cloned antigens on the virion surface. , 1985, Science.
[2] C. Obinger,et al. Directed evolution of Her2/neu-binding IgG1-Fc for improved stability and resistance to aggregation by using yeast surface display. , 2013, Protein engineering, design & selection : PEDS.
[3] A. Plückthun,et al. Bispecific Designed Ankyrin Repeat Proteins (DARPins) Targeting Epidermal Growth Factor Receptor Inhibit A431 Cell Proliferation and Receptor Recycling* , 2011, The Journal of Biological Chemistry.
[4] K D Wittrup,et al. Secretion efficiency in Saccharomyces cerevisiae of bovine pancreatic trypsin inhibitor mutants lacking disulfide bonds is correlated with thermodynamic stability. , 1998, Biochemistry.
[5] Akihiko Kondo,et al. Direct Production of Ethanol from Raw Corn Starch via Fermentation by Use of a Novel Surface-Engineered Yeast Strain Codisplaying Glucoamylase and α-Amylase , 2004, Applied and Environmental Microbiology.
[6] Ari Helenius,et al. Quality control in the endoplasmic reticulum , 2003, Nature Reviews Molecular Cell Biology.
[7] T. Gerngross,et al. Advances in the production of human therapeutic proteins in yeasts and filamentous fungi , 2004, Nature Biotechnology.
[8] U. Bornscheuer,et al. Directed Evolution of an Esterase from Pseudomonas fluorescens. Random Mutagenesis by Error-Prone PCR or a Mutator Strain and Identification of Mutants Showing Enhanced Enantioselectivity by a Resorufin-Based Fluorescence Assay , 1999, Biological chemistry.
[9] K Dane Wittrup,et al. Evolution of an interloop disulfide bond in high-affinity antibody mimics based on fibronectin type III domain and selected by yeast surface display: molecular convergence with single-domain camelid and shark antibodies. , 2007, Journal of molecular biology.
[10] J W Szostak,et al. RNA-peptide fusions for the in vitro selection of peptides and proteins. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[11] K. Wittrup,et al. Fine Affinity Discrimination by Yeast Surface Display and Flow Cytometry , 2000, Biotechnology progress.
[12] D. Ollis,et al. In vitro directed evolution of enzymes expressed by E. coli in microtiter plates. , 2013, Methods in molecular biology.
[13] Li Xu,et al. Efficient display of active Geotrichum sp. lipase on Pichia pastoris cell wall and its application as a whole-cell biocatalyst to enrich EPA and DHA in fish oil. , 2012, Journal of agricultural and food chemistry.
[14] W. Stemmer. Rapid evolution of a protein in vitro by DNA shuffling , 1994, Nature.
[15] J. Cochran,et al. Engineering hepatocyte growth factor fragments with high stability and activity as Met receptor agonists and antagonists , 2011, Proceedings of the National Academy of Sciences.
[16] K. Kuroda,et al. Bioadsorption of cadmium ion by cell surface-engineered yeasts displaying metallothionein and hexa-His , 2003, Applied Microbiology and Biotechnology.
[17] Shuangyan Han,et al. Combination of site-directed mutagenesis and yeast surface display enhances Rhizomucor miehei lipase esterification activity in organic solvent , 2011, Biotechnology Letters.
[18] Huimin Zhao,et al. Directed evolution of soluble single-chain human class II MHC molecules. , 2004, Journal of molecular biology.
[19] Guido Cappuccilli,et al. A general method for greatly improving the affinity of antibodies by using combinatorial libraries. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[20] K D Wittrup,et al. Protein Folding Stability Can Determine the Efficiency of Escape from Endoplasmic Reticulum Quality Control* , 1998, The Journal of Biological Chemistry.
[21] M. Ueda,et al. An oral vaccine against candidiasis generated by a yeast molecular display system. , 2013, Pathogens and disease.
[22] David R. Liu,et al. A general strategy for the evolution of bond-forming enzymes using yeast display , 2011, Proceedings of the National Academy of Sciences.
[23] Xiaoran Fu Stowell,et al. Limitations of yeast surface display in engineering proteins of high thermostability. , 2006, Protein engineering, design & selection : PEDS.
[24] G. Himmler,et al. Introducing antigen-binding sites in structural loops of immunoglobulin constant domains: Fc fragments with engineered HER2/neu-binding sites and antibody properties. , 2010, Protein engineering, design & selection : PEDS.
[25] K D Wittrup,et al. Yeast polypeptide fusion surface display levels predict thermal stability and soluble secretion efficiency. , 1999, Journal of molecular biology.
[26] Shen-Long Tsai,et al. Functional Assembly of Minicellulosomes on the Saccharomyces cerevisiae Cell Surface for Cellulose Hydrolysis and Ethanol Production , 2009, Applied and Environmental Microbiology.
[27] K. Kuroda,et al. Cell surface-engineered yeast displaying a histidine oligopeptide (hexa-His) has enhanced adsorption of and tolerance to heavy metal ions , 2001, Applied Microbiology and Biotechnology.
[28] K. A. White,et al. Directed evolution of a probe ligase with activity in the secretory pathway and application to imaging intercellular protein-protein interactions. , 2013, Biochemistry.
[29] R. C. Wright,et al. Highly stable binding proteins derived from the hyperthermophilic Sso7d scaffold. , 2011, Journal of molecular biology.
[30] Shen-Long Tsai,et al. Functional display of complex cellulosomes on the yeast surface via adaptive assembly. , 2013, ACS synthetic biology.
[31] M. Ueda,et al. Direct and Efficient Production of Ethanol from Cellulosic Material with a Yeast Strain Displaying Cellulolytic Enzymes , 2002, Applied and Environmental Microbiology.
[32] Y. Cho,et al. A decade of yeast surface display technology: where are we now? , 2008, Combinatorial chemistry & high throughput screening.
[33] Liang Li,et al. Yeast surface displaying glucose oxidase as whole-cell biocatalyst: construction, characterization, and its electrochemical glucose sensing application. , 2013, Analytical chemistry.
[34] A. Giaccia,et al. An engineered Axl 'decoy receptor' effectively silences the Gas6-Axl signaling axis. , 2014, Nature chemical biology.
[35] Jae-Hyung Jo,et al. Surface display of human lactoferrin using a glycosylphosphatidylinositol-anchored protein of Saccharomyces cerevisiae in Pichia pastoris , 2011, Biotechnology Letters.
[36] S. Bidlingmaier,et al. Construction and Application of a Yeast Surface-displayed Human cDNA Library to Identify Post-translational Modification-dependent Protein-Protein Interactions * , 2006, Molecular & Cellular Proteomics.
[37] S. Bidlingmaier,et al. Interrogating Yeast Surface-displayed Human Proteome to Identify Small Molecule-binding Proteins* , 2007, Molecular & Cellular Proteomics.
[38] M. Ueda,et al. Construction of Yeast Strains with High Cell Surface Lipase Activity by Using Novel Display Systems Based on the Flo1p Flocculation Functional Domain , 2002, Applied and Environmental Microbiology.
[39] C. Obinger,et al. Directed evolution of stabilized IgG1-Fc scaffolds by application of strong heat shock to libraries displayed on yeast , 2012, Biochimica et biophysica acta.
[40] K Dane Wittrup,et al. Yeast surface display for protein engineering and characterization , 2007, Current Opinion in Structural Biology.
[41] A. Plückthun,et al. In vitro selection and evolution of functional proteins by using ribosome display. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[42] H. Steven Wiley,et al. Flow-cytometric isolation of human antibodies from a nonimmune Saccharomyces cerevisiae surface display library , 2003, Nature Biotechnology.
[43] George Georgiou,et al. Engineering of TEV protease variants by yeast ER sequestration screening (YESS) of combinatorial libraries , 2013, Proceedings of the National Academy of Sciences.
[44] Adam P. Silverman,et al. Cystine‐knot peptides engineered with specificities for αIIbβ3 or αIIbβ3 and αvβ3 integrins are potent inhibitors of platelet aggregation , 2011, Journal of molecular recognition : JMR.
[45] N. Scholler. Selection of antibody fragments by yeast display. , 2012, Methods in molecular biology.
[46] R. Varadarajan,et al. Isolation of a High Affinity Neutralizing Monoclonal Antibody against 2009 Pandemic H1N1 Virus That Binds at the ‘Sa’ Antigenic Site , 2013, PloS one.
[47] Conrad C. Huang,et al. UCSF Chimera—A visualization system for exploratory research and analysis , 2004, J. Comput. Chem..
[48] K D Wittrup,et al. Isolation of anti-T cell receptor scFv mutants by yeast surface display. , 1997, Protein engineering.
[49] Shaun M Lippow,et al. Improved mutants from directed evolution are biased to orthologous substitutions. , 2006, Protein engineering, design & selection : PEDS.
[50] Mitchell Ho,et al. Isolation of anti-CD22 Fv with high affinity by Fv display on human cells. , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[51] Courtney C Aldrich,et al. Engineering the substrate specificity of the DhbE adenylation domain by yeast cell surface display. , 2013, Chemistry & biology.
[52] K. Kuroda,et al. Molecular design of yeast cell surface for adsorption and recovery of molybdenum, one of rare metals , 2010, Applied Microbiology and Biotechnology.
[53] J. Hahn,et al. Cellulosic ethanol production using a yeast consortium displaying a minicellulosome and β-glucosidase , 2013, Microbial Cell Factories.
[54] D. Lauffenburger,et al. High-affinity CD25-binding IL-2 mutants potently stimulate persistent T cell growth. , 2005, Biochemistry.
[55] J. Cochran,et al. Engineering Agatoxin, a Cystine-Knot Peptide from Spider Venom, as a Molecular Probe for In Vivo Tumor Imaging , 2013, PloS one.
[56] Garima Goyal,et al. Surface Display of a Functional Minicellulosome by Intracellular Complementation Using a Synthetic Yeast Consortium and Its Application to Cellulose Hydrolysis and Ethanol Production , 2010, Applied and Environmental Microbiology.
[57] M. Taussig,et al. Antibody-ribosome-mRNA (ARM) complexes as efficient selection particles for in vitro display and evolution of antibody combining sites. , 1997, Nucleic acids research.
[58] M. Flajnik,et al. High-affinity lamprey VLRA and VLRB monoclonal antibodies , 2009, Proceedings of the National Academy of Sciences.
[59] A. Kondo,et al. Recent developments in yeast cell surface display toward extended applications in biotechnology , 2012, Applied Microbiology and Biotechnology.
[60] Shohei Koide,et al. Target-binding proteins based on the 10th human fibronectin type III domain (¹⁰Fn3). , 2012, Methods in enzymology.
[61] E. Shusta,et al. An enhanced approach for engineering thermally stable proteins using yeast display. , 2012, Protein engineering, design & selection : PEDS.
[62] C. Obinger,et al. Directed evolution of proteins for increased stability and expression using yeast display. , 2012, Archives of biochemistry and biophysics.
[63] Jeong-Sun Kim,et al. Engineering of a human kringle domain into agonistic and antagonistic binding proteins functioning in vitro and in vivo , 2010, Proceedings of the National Academy of Sciences.
[64] Y. Cho,et al. Development of GFP-based biosensors possessing the binding properties of antibodies , 2009, Proceedings of the National Academy of Sciences.
[65] T. Hasunuma,et al. Applications of yeast cell-surface display in bio-refinery. , 2010, Recent patents on biotechnology.
[66] W. Dower,et al. Cell-free synthesis of peptide libraries displayed on polysomes. , 1996, Methods in enzymology.
[67] S. Wildt,et al. The humanization of N-glycosylation pathways in yeast , 2005, Nature Reviews Microbiology.
[68] M. Pantin-Jackwood,et al. Cell surface display of highly pathogenic avian influenza virus hemagglutinin on the surface of Pichia pastoris cells using α‐agglutinin for production of oral vaccines , 2009, Biotechnology progress.
[69] E. Boder,et al. Engineering antibodies by yeast display. , 2012, Archives of biochemistry and biophysics.
[70] Dan S. Tawfik,et al. Directed evolution of an extremely fast phosphotriesterase by in vitro compartmentalization , 2003, The EMBO journal.
[71] Jens-Peter Volkmer,et al. Engineered SIRPα Variants as Immunotherapeutic Adjuvants to Anticancer Antibodies , 2013, Science.
[72] N. Callewaert,et al. Engineering of glycosylation in yeast and other fungi: current state and perspectives , 2010, Applied Microbiology and Biotechnology.
[73] A. Roy,et al. The AGA1 product is involved in cell surface attachment of the Saccharomyces cerevisiae cell adhesion glycoprotein a-agglutinin , 1991, Molecular and cellular biology.
[74] Jennifer L. Lahti,et al. Engineered cystine-knot peptides that bind alpha(v)beta(3) integrin with antibody-like affinities. , 2009, Journal of molecular biology.
[75] I. Braakman,et al. Quality control in the endoplasmic reticulum protein factory , 2003, Nature.
[76] Yushu Ma,et al. Display of adenoregulin with a novel Pichia pastoris cell surface display system , 2007, Molecular biotechnology.
[77] A. Klibanov,et al. Highly l and d enantioselective variants of horseradish peroxidase discovered by an ultrahigh-throughput selection method , 2008, Proceedings of the National Academy of Sciences.
[78] K D Wittrup,et al. Directed evolution of antibody fragments with monovalent femtomolar antigen-binding affinity. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[79] K. Garcia,et al. Engineering and Characterization of a Stabilized α1/α2 Module of the Class I Major Histocompatibility Complex Product Ld* , 2006, Journal of Biological Chemistry.
[80] B Tidor,et al. Substantial energetic improvement with minimal structural perturbation in a high affinity mutant antibody. , 2004, Journal of molecular biology.
[81] R. Kimura,et al. Engineered cystine knot peptides that bind αvβ3, αvβ5, and α5β1 integrins with low‐nanomolar affinity , 2009, Proteins.
[82] K Dane Wittrup,et al. Isolating and engineering human antibodies using yeast surface display , 2006, Nature Protocols.
[83] R. Kimura,et al. Functional Mutation of Multiple Solvent-Exposed Loops in the Ecballium elaterium Trypsin Inhibitor-II Cystine Knot Miniprotein , 2011, PloS one.
[84] K D Wittrup,et al. In vitro evolution of a T cell receptor with high affinity for peptide/MHC. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[85] D. Steffens,et al. Efficient site-directed saturation mutagenesis using degenerate oligonucleotides. , 2007, Journal of biomolecular techniques : JBT.
[86] L. Bloom,et al. FN3: a new protein scaffold reaches the clinic. , 2009, Drug discovery today.
[87] B. Tidor,et al. Selection of horseradish peroxidase variants with enhanced enantioselectivity by yeast surface display. , 2007, Chemistry & biology.
[88] Akihiko Kondo,et al. Ethanol fermentation from lignocellulosic hydrolysate by a recombinant xylose- and cellooligosaccharide-assimilating yeast strain , 2006, Applied Microbiology and Biotechnology.
[89] D. Irvine,et al. Rapid conformational epitope mapping of anti-gp120 antibodies with a designed mutant panel displayed on yeast. , 2012, Journal of molecular biology.
[90] K. Kuroda,et al. Cell surface-engineered yeast with ability to bind, and self-aggregate in response to, copper ion , 2002, Applied Microbiology and Biotechnology.
[91] J. Dordick,et al. Generation of a broad esterolytic subtilisin using combined molecular evolution and periplasmic expression. , 2001, Protein engineering.
[92] A. Kapila,et al. Picomolar affinity fibronectin domains engineered utilizing loop length diversity, recursive mutagenesis, and loop shuffling. , 2008, Journal of molecular biology.
[93] J. Cochran,et al. Engineering knottins as novel binding agents. , 2012, Methods in enzymology.
[94] H. Kang,et al. Construction of an in vitro trans-sialylation system: surface display of Corynebacterium diphtheriae sialidase on Saccharomyces cerevisiae , 2010, Applied Microbiology and Biotechnology.
[95] Eric T. Boder,et al. Yeast surface display for screening combinatorial polypeptide libraries , 1997, Nature Biotechnology.
[96] K Dane Wittrup,et al. Fine epitope mapping of anti-epidermal growth factor receptor antibodies through random mutagenesis and yeast surface display. , 2004, Journal of molecular biology.
[97] I. Weissman,et al. Improving macrophage responses to therapeutic antibodies by molecular engineering of SIRPα variants , 2013, Oncoimmunology.
[98] K. Kuroda,et al. Application of the Arming System for the Expression of the 380R Antigen from Red Sea Bream Iridovirus (RSIV) on the Surface of Yeast Cells: A First Step for the Development of an Oral Vaccine , 2006, Biotechnology progress.
[99] G. Winter,et al. Phage antibodies: filamentous phage displaying antibody variable domains , 1990, Nature.
[100] J. C. Kapteyn,et al. The contribution of cell wall proteins to the organization of the yeast cell wall. , 1999, Biochimica et biophysica acta.
[101] David M Kranz,et al. Class II-restricted T cell receptor engineered in vitro for higher affinity retains peptide specificity and function. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[102] Michele C. Kieke,et al. Directed evolution of a stable scaffold for T-cell receptor engineering , 2000, Nature Biotechnology.
[103] D. Dimitrov,et al. Highly efficient selection of epitope specific antibody through competitive yeast display library sorting , 2013, mAbs.
[104] K. Kuroda,et al. Effective display of metallothionein tandem repeats on the bioadsorption of cadmium ion , 2006, Applied Microbiology and Biotechnology.
[105] J. Cochran,et al. Domain-level Antibody Epitope Mapping through Yeast Surface Display of Epidermal Growth Factor Receptor Fragments , 2022 .
[106] A. Koide,et al. The fibronectin type III domain as a scaffold for novel binding proteins. , 1998, Journal of molecular biology.
[107] Andrew S. Bennett,et al. Fine epitope mapping of monoclonal antibodies against hemagglutinin of a highly pathogenic H5N1 influenza virus using yeast surface display , 2011, Biochemical and Biophysical Research Communications.
[108] D. Lauffenburger,et al. Interleukin‐2 mutants with enhanced α‐receptor subunit binding affinity , 2003 .
[109] S. Bidlingmaier,et al. Identification of MCAM/CD146 as the target antigen of a human monoclonal antibody that recognizes both epithelioid and sarcomatoid types of mesothelioma. , 2009, Cancer research.
[110] H. Katinger,et al. Baculovirus surface display: construction and screening of a eukaryotic epitope library. , 1998, Nucleic acids research.
[111] Z. Halpern,et al. Development and Characterization of High Affinity Leptins and Leptin Antagonists* , 2010, The Journal of Biological Chemistry.
[112] M. Ueda,et al. Yeast cell-surface display—applications of molecular display , 2004, Applied Microbiology and Biotechnology.
[113] Cheryl L. Baird,et al. Construction and Screening of Antigen Targeted Immune Yeast Surface Display Antibody Libraries , 2008, Current protocols in cytometry.
[114] T. Ruml,et al. Surface Display of Metal Fixation Motifs of Bacterial P1-Type ATPases Specifically Promotes Biosorption of Pb2+ by Saccharomyces cerevisiae , 2010, Applied and Environmental Microbiology.
[115] J. Kuriyan,et al. Directed evolution of the epidermal growth factor receptor extracellular domain for expression in yeast , 2005, Proteins.
[116] W. Dower,et al. An in vitro polysome display system for identifying ligands from very large peptide libraries. , 1994, Proceedings of the National Academy of Sciences of the United States of America.
[117] Natsuko Miura,et al. Mutant firefly luciferases with improved specific activity and dATP discrimination constructed by yeast cell surface engineering , 2013, Applied Microbiology and Biotechnology.
[118] K. Kuroda,et al. Specific adsorption of tungstate by cell surface display of the newly designed ModE mutant , 2012, Applied Microbiology and Biotechnology.
[119] Nimish Gera,et al. Protein selection using yeast surface display. , 2013, Methods.
[120] Xuliang Jiang,et al. Structure-Expression Relationship of Tumor Necrosis Factor Receptor Mutants That Increase Expression* , 2003, Journal of Biological Chemistry.
[121] H. Bussey,et al. Glycosyl phosphatidylinositol-dependent cross-linking of alpha- agglutinin and beta 1,6-glucan in the Saccharomyces cerevisiae cell wall , 1995, The Journal of cell biology.
[122] K D Wittrup,et al. Yeast surface display for directed evolution of protein expression, affinity, and stability. , 2000, Methods in enzymology.
[123] A. Christmann,et al. Combinatorial Optimization of Cystine-Knot Peptides towards High-Affinity Inhibitors of Human Matriptase-1 , 2013, PloS one.
[124] D. Burton,et al. Efficient recovery of high-affinity antibodies from a single-chain Fab yeast display library. , 2009, Journal of molecular biology.
[125] Dan S. Tawfik,et al. Man-made cell-like compartments for molecular evolution , 1998, Nature Biotechnology.
[126] David M Kranz,et al. Characterization of T cell receptors engineered for high affinity against toxic shock syndrome toxin-1. , 2005, Journal of molecular biology.
[127] G. Georgiou,et al. Production and fluorescence-activated cell sorting of Escherichia coli expressing a functional antibody fragment on the external surface. , 1993, Proceedings of the National Academy of Sciences of the United States of America.