论文信息 - The 'rare biosphere': a reality check - 字舞流文

The 'rare biosphere': a reality check

Methods for error correction and classification of metagenomic datasets suggest that the rare biosphere is not as large as previously assumed.

Rob Knight | Jens Reeder | R. Knight | Jens Reeder | R. Knight

[1] Susan M. Huse,et al. Microbial diversity in the deep sea and the underexplored “rare biosphere” , 2006, Proceedings of the National Academy of Sciences.

[2] C. Quince,et al. Accurate determination of microbial diversity from 454 pyrosequencing data , 2009, Nature Methods.

[3] B. Roe,et al. A core gut microbiome in obese and lean twins , 2008, Nature.

[4] Susan M. Huse,et al. Accuracy and quality of massively parallel DNA pyrosequencing , 2007, Genome Biology.

[5] R. Knight,et al. The influence of sex, handedness, and washing on the diversity of hand surface bacteria , 2008, Proceedings of the National Academy of Sciences.

[6] G. Casella,et al. Pyrosequencing enumerates and contrasts soil microbial diversity , 2007, The ISME Journal.

[7] Philip Hugenholtz,et al. A renaissance for the pioneering 16S rRNA gene. , 2008, Current opinion in microbiology.

[8] I. Rigoutsos,et al. Accurate phylogenetic classification of variable-length DNA fragments , 2007, Nature Methods.

[9] S. Salzberg,et al. Phymm and PhymmBL: Metagenomic Phylogenetic Classification with Interpolated Markov Models , 2009, Nature Methods.

[10] R. Knight,et al. Evolution of Mammals and Their Gut Microbes , 2008, Science.