Conductance-Based Neuron Models and the Slow Dynamics of Excitability

In recent experiments, synaptically isolated neurons from rat cortical culture, were stimulated with periodic extracellular fixed-amplitude current pulses for extended durations of days. The neuron’s response depended on its own history, as well as on the history of the input, and was classified into several modes. Interestingly, in one of the modes the neuron behaved intermittently, exhibiting irregular firing patterns changing in a complex and variable manner over the entire range of experimental timescales, from seconds to days. With the aim of developing a minimal biophysical explanation for these results, we propose a general scheme, that, given a few assumptions (mainly, a timescale separation in kinetics) closely describes the response of deterministic conductance-based neuron models under pulse stimulation, using a discrete time piecewise linear mapping, which is amenable to detailed mathematical analysis. Using this method we reproduce the basic modes exhibited by the neuron experimentally, as well as the mean response in each mode. Specifically, we derive precise closed-form input-output expressions for the transient timescale and firing rates, which are expressed in terms of experimentally measurable variables, and conform with the experimental results. However, the mathematical analysis shows that the resulting firing patterns in these deterministic models are always regular and repeatable (i.e., no chaos), in contrast to the irregular and variable behavior displayed by the neuron in certain regimes. This fact, and the sensitive near-threshold dynamics of the model, indicate that intrinsic ion channel noise has a significant impact on the neuronal response, and may help reproduce the experimentally observed variability, as we also demonstrate numerically. In a companion paper, we extend our analysis to stochastic conductance-based models, and show how these can be used to reproduce the details of the observed irregular and variable neuronal response.

[1]  M. Alexander,et al.  Principles of Neural Science , 1981 .

[2]  A. Alonso,et al.  Noise from voltage-gated ion channels may influence neuronal dynamics in the entorhinal cortex. , 1998, Journal of neurophysiology.

[3]  Fox,et al.  Emergent collective behavior in large numbers of globally coupled independently stochastic ion channels. , 1994, Physical review. E, Statistical physics, plasmas, fluids, and related interdisciplinary topics.

[4]  L. Abbott,et al.  Modeling state-dependent inactivation of membrane currents. , 1994, Biophysical journal.

[5]  Wulfram Gerstner,et al.  SPIKING NEURON MODELS Single Neurons , Populations , Plasticity , 2002 .

[6]  J. Csicsvari,et al.  Intracellular features predicted by extracellular recordings in the hippocampus in vivo. , 2000, Journal of neurophysiology.

[7]  M. Gutnick,et al.  Slow inactivation of Na+ current and slow cumulative spike adaptation in mouse and guinea‐pig neocortical neurones in slices. , 1996, The Journal of physiology.

[8]  Mark D. McDonnell,et al.  The benefits of noise in neural systems: bridging theory and experiment , 2011, Nature Reviews Neuroscience.

[9]  Eric Shea-Brown,et al.  Stochastic differential equation models for ion channel noise in Hodgkin-Huxley neurons. , 2010, Physical review. E, Statistical, nonlinear, and soft matter physics.

[10]  B. Rudy,et al.  Slow inactivation of the sodium conductance in squid giant axons. Pronase resistance. , 1978, The Journal of physiology.

[11]  C E Elger,et al.  Slow recovery from inactivation regulates the availability of voltage‐dependent Na+ channels in hippocampal granule cells, hilar neurons and basket cells , 2001, The Journal of physiology.

[12]  Mario di Bernardo,et al.  Piecewise smooth dynamical systems , 2008, Scholarpedia.

[13]  B. Kampa,et al.  Action potential generation requires a high sodium channel density in the axon initial segment , 2008, Nature Neuroscience.

[14]  Alessandro Torcini,et al.  Dynamical phases of the Hindmarsh-Rose neuronal model: studies of the transition from bursting to spiking chaos. , 2007, Chaos.

[15]  John N. Tsitsiklis,et al.  Deciding stability and mortality of piecewise affine dynamical systems , 2001, Theor. Comput. Sci..

[16]  Erik De Schutter Computational Modeling Methods for Neuroscientists , 2009 .

[17]  D. Debanne Information processing in the axon , 2004, Nature Reviews Neuroscience.

[18]  Olivier Faugeras,et al.  The spikes trains probability distributions: A stochastic calculus approach , 2007, Journal of Physiology-Paris.

[19]  Kaplan,et al.  Subthreshold dynamics in periodically stimulated squid giant axons. , 1996, Physical review letters.

[20]  Peter F. Rowat,et al.  Interspike Interval Statistics in the Stochastic Hodgkin-Huxley Model: Coexistence of Gamma Frequency Bursts and Highly Irregular Firing , 2007, Neural Computation.

[21]  Xiao-Jing Wang,et al.  Genesis of bursting oscillations in the Hindmarsh-Rose model and homoclinicity to a chaotic saddle , 1993 .

[22]  A. Kriegstein,et al.  Morphological classification of rat cortical neurons in cell culture , 1983, The Journal of neuroscience : the official journal of the Society for Neuroscience.

[23]  Idan Segev,et al.  Ion Channel Stochasticity May Be Critical in Determining the Reliability and Precision of Spike Timing , 1998, Neural Computation.

[24]  J. White,et al.  Channel noise in neurons , 2000, Trends in Neurosciences.

[25]  W. Chandler,et al.  Slow changes in membrane permeability and long‐lasting action potentials in axons perfused with fluoride solutions , 1970, The Journal of physiology.

[26]  Michele Giugliano,et al.  Accurate and Fast Simulation of Channel Noise in Conductance-Based Model Neurons by Diffusion Approximation , 2011, PLoS Comput. Biol..

[27]  D. Debanne,et al.  Axon physiology. , 2011, Physiological reviews.

[28]  C. D. Gelatt,et al.  Optimization by Simulated Annealing , 1983, Science.

[29]  A. Polsky,et al.  Synaptic Integration in Tuft Dendrites of Layer 5 Pyramidal Neurons: A New Unifying Principle , 2009, Science.

[30]  I. Parnas,et al.  Differential conduction block in branches of a bifurcating axon. , 1979, The Journal of physiology.

[31]  Ron Meir,et al.  History-Dependent Dynamics in a Generic Model of Ion Channels – An Analytic Study , 2009, Front. Comput. Neurosci..

[32]  Shimon Marom,et al.  Neural timescales or lack thereof , 2010, Progress in Neurobiology.

[33]  A. Aldo Faisal,et al.  Stochastic Simulations on the Reliability of Action Potential Propagation in Thin Axons , 2007, PLoS Comput. Biol..

[34]  W. N. Ross,et al.  Na+ imaging reveals little difference in action potential–evoked Na+ influx between axon and soma , 2010, Nature Neuroscience.

[35]  R. FitzHugh Impulses and Physiological States in Theoretical Models of Nerve Membrane. , 1961, Biophysical journal.

[36]  Schuster,et al.  Suppressing chaos in neural networks by noise. , 1992, Physical review letters.

[37]  A. Hodgkin,et al.  A quantitative description of membrane current and its application to conduction and excitation in nerve , 1952, The Journal of physiology.

[38]  R. de Col,et al.  Conduction velocity is regulated by sodium channel inactivation in unmyelinated axons innervating the rat cranial meninges , 2008, The Journal of physiology.

[39]  Bartlett W. Mel,et al.  Computational subunits in thin dendrites of pyramidal cells , 2004, Nature Neuroscience.

[40]  B. Kendall Nonlinear Dynamics and Chaos , 2001 .

[41]  J. Thompson,et al.  Nonlinear Dynamics and Chaos , 2002 .

[42]  P. J. Sjöström,et al.  Dendritic excitability and synaptic plasticity. , 2008, Physiological reviews.

[43]  Robert L Ruff Slow inactivation , 2008, Neurology.

[44]  Alan D Dorval,et al.  Channel Noise is Essential for Perithreshold Oscillations in Entorhinal Stellate Neurons , 2005, The Journal of Neuroscience.

[45]  Christof Koch,et al.  Intrinsic Noise in Cultured Hippocampal Neurons: Experiment and Modeling , 2004, The Journal of Neuroscience.

[46]  M. Binder,et al.  Multiple mechanisms of spike-frequency adaptation in motoneurones , 1999, Journal of Physiology-Paris.

[47]  L. Pinneo On noise in the nervous system. , 1966, Psychological review.

[48]  J. Keener Chaotic behavior in piecewise continuous difference equations , 1980 .

[49]  Shimon Marom,et al.  Interaction between Duration of Activity and Time Course of Recovery from Slow Inactivation in Mammalian Brain Na+Channels , 1998, The Journal of Neuroscience.

[50]  N. Parga,et al.  Short-term Synaptic Depression Causes a Non-monotonic Response to Correlated Stimuli , 2022 .

[51]  I. Parnas,et al.  Mechanisms involved in differential conduction of potentials at high frequency in a branching axon. , 1979, The Journal of physiology.

[52]  G Bard Ermentrout,et al.  Optimal time scale for spike-time reliability: theory, simulations, and experiments. , 2008, Journal of neurophysiology.

[53]  Van den Broeck C,et al.  Noise-induced nonequilibrium phase transition. , 1994, Physical review letters.

[54]  Richard W. Aldrich,et al.  Two types of inactivation in Shaker K+ channels: Effects of alterations in the carboxy-terminal region , 1991, Neuron.

[55]  任维,et al.  Interpreting a period-adding bifurcation scenario in neural bursting patterns using border-collision bifurcation in a discontinuous map of a slow control variable , 2010 .

[56]  J. Schiller,et al.  Dynamics of Excitability over Extended Timescales in Cultured Cortical Neurons , 2010, The Journal of Neuroscience.

[57]  S. Wiggins Introduction to Applied Nonlinear Dynamical Systems and Chaos , 1989 .

[58]  Bard Ermentrout,et al.  Linearization of F-I Curves by Adaptation , 1998, Neural Computation.

[59]  Gregoire Nicolis,et al.  Stochastic resonance , 2007, Scholarpedia.

[60]  Benjamin Lindner,et al.  How Noisy Adaptation of Neurons Shapes Interspike Interval Histograms and Correlations , 2010, PLoS Comput. Biol..

[61]  Laura Gardini,et al.  Endogenous cycles in discontinuous growth models , 2011, Math. Comput. Simul..

[62]  Alan F. Murray,et al.  Synaptic weight noise during multilayer perceptron training: fault tolerance and training improvements , 1993, IEEE Trans. Neural Networks.

[63]  Georgi S. Medvedev,et al.  Reduction of a model of an excitable cell to a one-dimensional map , 2005 .

[64]  David Terman,et al.  Mathematical foundations of neuroscience , 2010 .

[65]  J T Rubinstein,et al.  Threshold fluctuations in an N sodium channel model of the node of Ranvier. , 1995, Biophysical journal.

[66]  T. Sejnowski,et al.  Reliability of spike timing in neocortical neurons. , 1995, Science.

[67]  C. Koch,et al.  Methods in Neuronal Modeling: From Ions to Networks , 1998 .

[68]  Henry Markram,et al.  Minimal Hodgkin–Huxley type models for different classes of cortical and thalamic neurons , 2008, Biological Cybernetics.

[69]  Avner Wallach,et al.  Neuronal Response Clamp , 2010, Front. Neuroeng..

[70]  Carson C. Chow,et al.  Spontaneous action potentials due to channel fluctuations. , 1996, Biophysical journal.

[71]  Christof Koch,et al.  Subthreshold Voltage Noise Due to Channel Fluctuations in Active Neuronal Membranes , 2000, Journal of Computational Neuroscience.

[72]  William R. Softky,et al.  The highly irregular firing of cortical cells is inconsistent with temporal integration of random EPSPs , 1993, The Journal of neuroscience : the official journal of the Society for Neuroscience.

[73]  C. Budd,et al.  Review of ”Piecewise-Smooth Dynamical Systems: Theory and Applications by M. di Bernardo, C. Budd, A. Champneys and P. 2008” , 2020 .

[74]  Vivien A. Casagrande,et al.  Biophysics of Computation: Information Processing in Single Neurons , 1999 .

[75]  C. Morris,et al.  Voltage oscillations in the barnacle giant muscle fiber. , 1981, Biophysical journal.

[76]  J. Ruppersberg Ion Channels in Excitable Membranes , 1996 .

[77]  M. Sanjuán,et al.  Map-based models in neuronal dynamics , 2011 .

[78]  Bruno A Olshausen,et al.  Sparse coding of sensory inputs , 2004, Current Opinion in Neurobiology.

[79]  Mark Pernarowski,et al.  Return Map Characterizations for a Model of Bursting with Two Slow Variables , 2006, SIAM J. Appl. Math..

[80]  Cian O'Donnell,et al.  Stochastic Ion Channel Gating in Dendritic Neurons: Morphology Dependence and Probabilistic Synaptic Activation of Dendritic Spikes , 2010, PLoS Comput. Biol..

[81]  Bard Ermentrout,et al.  Type I Membranes, Phase Resetting Curves, and Synchrony , 1996, Neural Computation.

[82]  A. Thomson Facilitation, augmentation and potentiation at central synapses , 2000, Trends in Neurosciences.

[83]  John Guckenheimer,et al.  Chaos in the Hodgkin-Huxley Model , 2002, SIAM J. Appl. Dyn. Syst..

[84]  Alan F. Murray,et al.  Enhanced MLP performance and fault tolerance resulting from synaptic weight noise during training , 1994, IEEE Trans. Neural Networks.

[85]  B. Bean The action potential in mammalian central neurons , 2007, Nature Reviews Neuroscience.

[86]  Pedro V. Carelli,et al.  Whole cell stochastic model reproduces the irregularities found in the membrane potential of bursting neurons. , 2005, Journal of neurophysiology.

[87]  A. Aldo Faisal,et al.  Stochastic Simulation of Neurons, Axons, and Action Potentials , 2009 .

[88]  Russ Bubley,et al.  Randomized algorithms , 1995, CSUR.

[89]  Ila R Fiete,et al.  Gradient learning in spiking neural networks by dynamic perturbation of conductances. , 2006, Physical review letters.

[90]  Multiplying two numbers together in your head is a difficult task if you did not learn multiplication tables as a child. On the face of it, this is somewhat surprising given the remarkable power of the brain to perform , 2010 .

[91]  C. Lee Giles,et al.  An analysis of noise in recurrent neural networks: convergence and generalization , 1996, IEEE Trans. Neural Networks.