STAT5BN642H is a driver mutation for T cell neoplasia

STAT5B is often mutated in hematopoietic malignancies. The most frequent STAT5B mutation, Asp642His (N642H), has been found in over 90 leukemia and lymphoma patients. Here, we used the Vav1 promoter to generate transgenic mouse models that expressed either human STAT5B or STAT5BN642H in the hematopoietic compartment. While STAT5B-expressing mice lacked a hematopoietic phenotype, the STAT5BN642H-expressing mice rapidly developed T cell neoplasms. Neoplasia manifested as transplantable CD8+ lymphoma or leukemia, indicating that the STAT5BN642H mutation drives cancer development. Persistent and enhanced levels of STAT5BN642H tyrosine phosphorylation in transformed CD8+ T cells led to profound changes in gene expression that were accompanied by alterations in DNA methylation at potential histone methyltransferase EZH2-binding sites. Aurora kinase genes were enriched in STAT5BN642H-expressing CD8+ T cells, which were exquisitely sensitive to JAK and Aurora kinase inhibitors. Together, our data suggest that JAK and Aurora kinase inhibitors should be further explored as potential therapeutics for lymphoma and leukemia patients with the STAT5BN642H mutation who respond poorly to conventional chemotherapy.

[1]  Jun Liu,et al.  CSF3R T618I, ASXL1 G942 fs and STAT5B N642H trimutation co‐contribute to a rare chronic neutrophilic leukaemia manifested by rapidly progressive leucocytosis, severe infections, persistent fever and deep venous thrombosis , 2018, British journal of haematology.

[2]  Lisa Borghesi Faculty Opinions recommendation of Antagonism of B cell enhancer networks by STAT5 drives leukemia and poor patient survival. , 2017 .

[3]  S. Bortoluzzi,et al.  Genomic landscape characterization of large granular lymphocyte leukemia with a systems genetics approach , 2017, Leukemia.

[4]  S. Bortoluzzi,et al.  High incidence of activating STAT5B mutations in CD4-positive T-cell large granular lymphocyte leukemia. , 2016, Blood.

[5]  G. Boucher,et al.  Chemo-genomic interrogation of CEBPA mutated AML reveals recurrent CSF3R mutations and subgroup sensitivity to JAK inhibitors. , 2016, Blood.

[6]  T. Karantanos,et al.  Regulation of T Cell Differentiation and Function by EZH2 , 2016, Frontiers in immunology.

[7]  S. Armstrong,et al.  Exploiting the Epigenome to Control Cancer-Promoting Gene-Expression Programs. , 2016, Cancer cell.

[8]  L. Hennighausen,et al.  Signal transducer and activator of transcription 5 (STAT5) paralog dose governs T cell effector and regulatory functions , 2016, eLife.

[9]  R. Siebert,et al.  Genes encoding members of the JAK‐STAT pathway or epigenetic regulators are recurrently mutated in T‐cell prolymphocytic leukaemia , 2016, British journal of haematology.

[10]  Dachuan Huang,et al.  JAK-STAT and G-protein-coupled receptor signaling pathways are frequently altered in epitheliotropic intestinal T-cell lymphoma , 2016, Leukemia.

[11]  L. Cimmino,et al.  The Impact of DNA Methylation in Hematopoietic Malignancies. , 2016, Trends in cancer.

[12]  Nathan C. Sheffield,et al.  LOLA: enrichment analysis for genomic region sets and regulatory elements in R and Bioconductor , 2015, Bioinform..

[13]  T. Karantanos,et al.  Regulation of T Cell Differentiation and Function by EZH2 , 2016, Front. Immunol..

[14]  Naomi A. Sengamalay,et al.  Concurrent Mutations in ATM and Genes Associated with Common γ Chain Signaling in Peripheral T Cell Lymphoma , 2015, PloS one.

[15]  L. Hennighausen,et al.  Loss of EZH2 results in precocious mammary gland development and activation of STAT5-dependent genes , 2015, Nucleic acids research.

[16]  E. Zandi,et al.  Hydrogen Sulfide Promotes Tet1- and Tet2-Mediated Foxp3 Demethylation to Drive Regulatory T Cell Differentiation and Maintain Immune Homeostasis. , 2015, Immunity.

[17]  M. Nakao,et al.  STAT5 Orchestrates Local Epigenetic Changes for Chromatin Accessibility and Rearrangements by Direct Binding to the TCRγ Locus , 2015, The Journal of Immunology.

[18]  T. Ikezoe,et al.  STAT5A regulates DNMT3A in CD34(+)/CD38(-) AML cells. , 2015, Leukemia research.

[19]  J. Biegel,et al.  Emergence of clonal hematopoiesis in the majority of patients with acquired aplastic anemia. , 2015, Cancer genetics.

[20]  Nathan C. Sheffield,et al.  Epigenome Mapping Reveals Distinct Modes of Gene Regulation and Widespread Enhancer Reprogramming by the Oncogenic Fusion Protein EWS-FLI1 , 2015, Cell reports.

[21]  Surasak Leelaudomlipi,et al.  TOP2A Amplification and Overexpression in Hepatocellular Carcinoma Tissues , 2015, BioMed research international.

[22]  Can Alkan,et al.  Activating mutations of STAT5B and STAT3 in lymphomas derived from γδ-T or NK cells , 2015, Nature Communications.

[23]  L. Kenner,et al.  Stat5 gene dosage in T cells modulates CD8+ T‐cell homeostasis and attenuates contact hypersensitivity response in mice , 2015, Allergy.

[24]  F. Speleman,et al.  Epigenetics in T‐cell acute lymphoblastic leukemia , 2015, Immunological reviews.

[25]  Q. Hu,et al.  Top2a identifies and provides epigenetic rationale for novel combination therapeutic strategies for aggressive prostate cancer , 2014, Oncotarget.

[26]  W. Xue,et al.  Exome sequencing identifies somatic mutations of DDX3X in natural killer/T-cell lymphoma , 2014, Nature Genetics.

[27]  Patrick Lombard,et al.  CODEX: a next-generation sequencing experiment database for the haematopoietic and embryonic stem cell communities , 2014, Nucleic Acids Res..

[28]  Suning Chen,et al.  Rare occurrence of a STAT5B N642H mutation in adult T-cell acute lymphoblastic leukemia. , 2015, Cancer genetics.

[29]  C. Alkan,et al.  Activating mutations of STAT 5 B and STAT 3 in lymphomas derived from gdT or NK cells , 2015 .

[30]  D. Sasseville,et al.  Deregulation in STAT signaling is important for cutaneous T-cell lymphoma (CTCL) pathogenesis and cancer progression , 2014, Cell cycle.

[31]  T. Rausch,et al.  The activating STAT5B N642H mutation is a common abnormality in pediatric T-cell acute lymphoblastic leukemia and confers a higher risk of relapse , 2014, Haematologica.

[32]  Thomas Lengauer,et al.  Comprehensive Analysis of DNA Methylation Data with RnBeads , 2014, Nature Methods.

[33]  K. Elenitoba-Johnson,et al.  Integrated genomic sequencing reveals mutational landscape of T-cell prolymphocytic leukemia. , 2014, Blood.

[34]  T. Waldmann,et al.  Frequent STAT5B mutations in γδ hepatosplenic T-cell lymphomas , 2014, Leukemia.

[35]  Heather L. Mulder,et al.  The landscape of somatic mutations in epigenetic regulators across 1,000 paediatric cancer genomes , 2014, Nature Communications.

[36]  Björn Usadel,et al.  Trimmomatic: a flexible trimmer for Illumina sequence data , 2014, Bioinform..

[37]  O. Lohi,et al.  Novel activating STAT5B mutations as putative drivers of T-cell acute lymphoblastic leukemia , 2014, Leukemia.

[38]  Michael P. Snyder,et al.  Identification of STAT5A and STAT5B Target Genes in Human T Cells , 2014, PloS one.

[39]  S. Orkin,et al.  Polycomb repressive complex 2 regulates normal hematopoietic stem cell function in a developmental-stage-specific manner. , 2014, Cell stem cell.

[40]  L. Staudt,et al.  Gene expression signatures delineate biological and prognostic subgroups in peripheral T-cell lymphoma. , 2012, Blood.

[41]  G. Crispatzu,et al.  Models for mature T-cell lymphomas--a critical appraisal of experimental systems and their contribution to current T-cell tumorigenic concepts. , 2013, Critical reviews in oncology/hematology.

[42]  S. Spicuglia,et al.  Active STAT5 Regulates T-bet and Eomesodermin Expression in CD8 T Cells and Imprints a T-bet–Dependent Tc1 Program with Repressed IL-6/TGF-β1 Signaling , 2013, The Journal of Immunology.

[43]  S. Mustjoki,et al.  Discovery of somatic STAT5b mutations in large granular lymphocytic leukemia. , 2013, Blood.

[44]  Mingliang Xu,et al.  The genetic and molecular basis of plant resistance to pathogens. , 2013, Journal of genetics and genomics = Yi chuan xue bao.

[45]  Keunsoo Kang,et al.  Comprehensive meta-analysis of Signal Transducers and Activators of Transcription (STAT) genomic binding patterns discerns cell-specific cis-regulatory modules , 2012, BMC Genomics.

[46]  Yuka Kanno,et al.  STATs Shape the Active Enhancer Landscape of T Cell Populations , 2012, Cell.

[47]  Stein Aerts,et al.  High Accuracy Mutation Detection in Leukemia on a Selected Panel of Cancer Genes , 2012, PloS one.

[48]  Shan-qi Guo,et al.  Histone Deacetylase Inhibition: An Important Mechanism in the Treatment of Lymphoma , 2012, Cancer biology & medicine.

[49]  Peter A. Jones Functions of DNA methylation: islands, start sites, gene bodies and beyond , 2012, Nature Reviews Genetics.

[50]  Kairong Cui,et al.  Critical Role of STAT5 transcription factor tetramerization for cytokine responses and normal immune function. , 2012, Immunity.

[51]  J. Darnell,et al.  The JAK-STAT pathway at twenty. , 2012, Immunity.

[52]  M. Farrar,et al.  The role of STAT5 in lymphocyte development and transformation. , 2012, Current opinion in immunology.

[53]  G. Superti-Furga,et al.  BCR-ABL uncouples canonical JAK2-STAT5 signaling in chronic myeloid leukemia. , 2012, Nature chemical biology.

[54]  Christoph Bock,et al.  RRBSMAP: a fast, accurate and user-friendly alignment tool for reduced representation bisulfite sequencing , 2012, Bioinform..

[55]  M. Minden,et al.  Small molecule STAT5-SH2 domain inhibitors exhibit potent antileukemia activity. , 2012, Journal of medicinal chemistry.

[56]  R. Moriggl,et al.  Stat5 as a Hematopoietic Master Regulator for Differentiation and Neoplasia Development , 2012 .

[57]  S. Daignault,et al.  TET2 and DNMT3A Mutations in Human T-Cell Lymphoma , 2012 .

[58]  A. Dinner,et al.  Epigenetic repression of the Igk locus by STAT5-mediated recruitment of the histone methyltransferase Ezh2 , 2011, Nature Immunology.

[59]  N. Nakagata Cryopreservation of mouse spermatozoa and in vitro fertilization. , 2011, Methods in molecular biology.

[60]  N. Friedman,et al.  Densely Interconnected Transcriptional Circuits Control Cell States in Human Hematopoiesis , 2011, Cell.

[61]  N. Luscombe,et al.  Sensitized phenotypic screening identifies gene dosage sensitive region on chromosome 11 that predisposes to disease in mice , 2011, EMBO molecular medicine.

[62]  G. Ferbeyre,et al.  The role of Stat5 transcription factors as tumor suppressors or oncogenes. , 2011, Biochimica et biophysica acta.

[63]  C. Scrideli,et al.  research paper: Differential expression of HDAC3, HDAC7 and HDAC9 is associated with prognosis and survival in childhood acute lymphoblastic leukaemia , 2010, British journal of haematology.

[64]  F. Finkelman,et al.  STAT5 Is Critical To Maintain Effector CD8+ T Cell Responses , 2010, The Journal of Immunology.

[65]  W. Chan,et al.  Molecular signatures to improve diagnosis in peripheral T-cell lymphoma and prognostication in angioimmunoblastic T-cell lymphoma. , 2010, Blood.

[66]  T. Fioretos,et al.  Gene expression signatures in childhood acute leukemias are largely unique and distinct from those of normal tissues and other malignancies , 2010, BMC Medical Genomics.

[67]  Miyuki Abe,et al.  STAT5 Activation Is Critical for the Transformation Mediated by Myeloproliferative Disorder-associated JAK2 V617F Mutant* , 2009, The Journal of Biological Chemistry.

[68]  Wei Li,et al.  BSMAP: whole genome bisulfite sequence MAPping program , 2009, BMC Bioinformatics.

[69]  L. Hood,et al.  Dysregulated gene expression networks in human acute myelogenous leukemia stem cells , 2009, Proceedings of the National Academy of Sciences.

[70]  P. Lio’,et al.  Hematopoietic Stem Cells Reversibly Switch from Dormancy to Self-Renewal during Homeostasis and Repair , 2008, Cell.

[71]  Jiahuai Han,et al.  Integrated regulation of Toll-like receptor responses by Notch and interferon-gamma pathways. , 2008, Immunity.

[72]  K. D. Bunting,et al.  STAT5 signaling in normal and pathologic hematopoiesis. , 2007, Frontiers in bioscience : a journal and virtual library.

[73]  Chunaram Choudhary,et al.  Activation mechanisms of STAT5 by oncogenic Flt3-ITD. , 2006, Blood.

[74]  L. Bystrykh,et al.  The Polycomb group gene Ezh2 prevents hematopoietic stem cell exhaustion. , 2006, Blood.

[75]  A. Gnirke,et al.  Reduced representation bisulfite sequencing for comparative high-resolution DNA methylation analysis , 2005, Nucleic acids research.

[76]  M. Stratton,et al.  The COSMIC (Catalogue of Somatic Mutations in Cancer) database and website , 2004, British Journal of Cancer.

[77]  T. Rülicke Pronuclear microinjection of mouse zygotes. , 2004, Methods in molecular biology.

[78]  D. Baltimore,et al.  Essential Role for STAT5 Signaling in CD25+CD4+ Regulatory T Cell Homeostasis and the Maintenance of Self-Tolerance1 , 2003, The Journal of Immunology.

[79]  W. Leonard,et al.  Stat5 Synergizes with T Cell Receptor/Antigen Stimulation in the Development of Lymphoblastic Lymphoma , 2003, The Journal of experimental medicine.

[80]  L. Nie,et al.  STAT5‐induced Id‐1 transcription involves recruitment of HDAC1 and deacetylation of C/EBPβ , 2003, The EMBO journal.

[81]  W. Leonard,et al.  A Role for Stat5 in CD8+ T Cell Homeostasis , 2003, The Journal of Immunology.

[82]  Daniel A Starr,et al.  Human Zw10 and ROD are mitotic checkpoint proteins that bind to kinetochores , 2000, Nature Cell Biology.

[83]  Jianzhu Chen,et al.  Homeostasis-Stimulated Proliferation Drives Naive T Cells to Differentiate Directly into Memory T Cells , 2000, The Journal of experimental medicine.

[84]  W. Leonard,et al.  The role of Stat5a and Stat5b in signaling by IL-2 family cytokines , 2000, Oncogene.

[85]  Lukas Wagner,et al.  A Greedy Algorithm for Aligning DNA Sequences , 2000, J. Comput. Biol..

[86]  S. Jameson,et al.  Homeostatic expansion and phenotypic conversion of naïve T cells in response to self peptide/MHC ligands. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[87]  K. Brduscha-Riem,et al.  Naïve cytotoxic T lymphocytes spontaneously acquire effector function in lymphocytopenic recipients: A pitfall for T cell memory studies? , 1999, European journal of immunology.

[88]  A. W. Harris,et al.  Promoter elements of vav drive transgene expression in vivo throughout the hematopoietic compartment. , 1999, Blood.

[89]  W. Leonard,et al.  Stat5b Is Essential for Natural Killer Cell–mediated Proliferation and Cytolytic Activity , 1998, The Journal of experimental medicine.

[90]  I. Hickson,et al.  Structure and function of type II DNA topoisomerases. , 1994, The Biochemical journal.

[91]  Michael McClelland,et al.  Use of DNA methyltransferase/endonuclease enzyme combinations for megabase mapping of chromosomes. , 1992, Methods in enzymology.

[92]  S. Ho,et al.  Site-directed mutagenesis by overlap extension using the polymerase chain reaction. , 1989, Gene.