Translation rate modification by preferential codon usage: intragenic position effects.

[1]  P. Reeves,et al.  Intermediates in the synthesis of TolC protein include an incomplete peptide stalled at a rare Arg codon. , 1985, European journal of biochemistry.

[2]  F. Sherman,et al.  A mutation allowing an mRNA secondary structure diminishes translation of Saccharomyces cerevisiae iso-1-cytochrome c , 1985, Molecular and cellular biology.

[3]  K. Jensen,et al.  Codon-defined ribosomal pausing in Escherichia coli detected by using the pyrE attenuator to probe the coupling between transcription and translation. , 1985, Nucleic acids research.

[4]  M Yarus,et al.  Sense codons are found in specific contexts. , 1985, Journal of molecular biology.

[5]  C. Yanofsky,et al.  Analysis of the requirements for transcription pausing in the tryptophan operon. , 1985, Journal of molecular biology.

[6]  E. G. Shpaer.  The secondary structure of mRNAs from Escherichia coli: its possible role in increasing the accuracy of translation , 1985, Nucleic Acids Res..

[7]  R. Lloubès,et al.  Translation is a non-uniform process. Effect of tRNA availability on the rate of elongation of nascent polypeptide chains. , 1984, Journal of molecular biology.

[8]  S. Pedersen.  Escherichia coli ribosomes translate in vivo with variable rate. , 1984, The EMBO journal.

[9]  R. Blake,et al.  Analysis of the codon bias in E. coli sequences. , 1984, Journal of biomolecular structure & dynamics.

[10]  M. Bibb,et al.  The relationship between base composition and codon usage in bacterial genes and its use for the simple and reliable identification of protein-coding sequences. , 1984, Gene.

[11]  G Humphreys,et al.  Codon usage can affect efficiency of translation of genes in Escherichia coli. , 1984, Nucleic acids research.

[12]  P. Perrin,et al.  Coding strategy differences between constant and variable segments of immunoglobulin genes , 1984, Nucleic Acids Res..

[13]  D J Lipman,et al.  Contextual constraints on synonymous codon choice. , 1983, Journal of molecular biology.

[14]  M. Gouy,et al.  Codon usage in bacteria: correlation with gene expressivity. , 1982, Nucleic acids research.

[15]  W. Fiers,et al.  Preferential codon usage in prokaryotic genes: the optimal codon-anticodon interaction energy and the selective codon usage in efficiently expressed genes. , 1982, Gene.

[16]  T. Ikemura.  Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: a proposal for a synonymous codon choice that is optimal for the E. coli translational system. , 1981, Journal of molecular biology.

[17]  T. Ikemura.  Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes. , 1981, Journal of molecular biology.

[18]  Manolo Gouy,et al.  Codon catalog usage is a genome strategy modulated for gene expressivity , 1981, Nucleic Acids Res..

[19]  M. Gouy,et al.  Polypeptide elongation and tRNA cycling in Escherichia coli: A dynamic approach , 1980, FEBS letters.

[20]  D. Vapnek,et al.  Nucleotide sequence analysis of the chloramphenicol resistance transposon Tn9 , 1979, Nature.

[21]  H. Lodish,et al.  A kinetic model of protein synthesis. Application to hemoglobin synthesis and translational control. , 1979, The Journal of biological chemistry.

[22]  G von Heijne,et al.  The concentration dependence of the error frequencies and some related quantities in protein synthesis. , 1979, Journal of theoretical biology.

[23]  W. Fiers,et al.  On codon usage , 1979, Nature.

[24]  R. Gordon,et al.  Polyribosome dynamics at steady state. , 1969, Journal of theoretical biology.

[25]  A. Pipkin,et al.  Kinetics of biopolymerization on nucleic acid templates , 1968, Biopolymers.

[26]  M. Ehrenberg,et al.  Optimization of translation accuracy. , 1984, Progress in nucleic acid research and molecular biology.

[27]  F. Neidhardt,et al.  Growth of the bacterial cell , 1983 .

[28]  J. Garel,et al.  Functional adaptation of tRNA population. , 1974, Journal of theoretical biology.