Gene expression profiling of oxidative stress response of C. elegans aging defective AMPK mutants using massively parallel transcriptome sequencing

[1]  Kaveh Ashrafi,et al.  C. elegans fat storage and metabolic regulation. , 2009, Biochimica et biophysica acta.

[2]  Kenneth L. Jones,et al.  Caenorhabditis elegans Genomic Response to Soil Bacteria Predicts Environment-Specific Genetic Effects on Life History Traits , 2009, PLoS genetics.

[3]  P. Green,et al.  Massively parallel sequencing of the polyadenylated transcriptome of C. elegans. , 2009, Genome research.

[4]  J. Watts.  Fat synthesis and adiposity regulation in Caenorhabditis elegans , 2009, Trends in Endocrinology & Metabolism.

[5]  R. Roy,et al.  Caenorhabditis elegans dauers need LKB1/AMPK to ration lipid reserves and ensure long-term survival , 2009, Nature.

[6]  G. Ruvkun,et al.  Fat Metabolism Links Germline Stem Cells and Longevity in C. elegans , 2008, Science.

[7]  M. Stephens,et al.  RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays. , 2008, Genome research.

[8]  Lucinda K. Southworth,et al.  An elt-3/elt-5/elt-6 GATA Transcription Circuit Guides Aging in C. elegans , 2008, Cell.

[9]  A. Gartner,et al.  The Caenorhabditis elegans AMP-activated Protein Kinase AAK-2 Is Phosphorylated by LKB1 and Is Required for Resistance to Oxidative Stress and for Normal Motility and Foraging Behavior* , 2008, Journal of Biological Chemistry.

[10]  S. Gygi,et al.  An AMPK-FOXO Pathway Mediates Longevity Induced by a Novel Method of Dietary Restriction in C. elegans , 2007, Current Biology.

[11]  Nektarios Tavernarakis,et al.  Genome-wide investigation reveals pathogen-specific and shared signatures in the response of Caenorhabditis elegans to infection , 2007, Genome Biology.

[12]  Hong Sun,et al.  Functional genomic approach to identify novel genes involved in the regulation of oxidative stress resistance and animal lifespan , 2007, Aging cell.

[13]  Jun Hee Lee,et al.  Energy-dependent regulation of cell structure by AMP-activated protein kinase , 2007, Nature.

[14]  D. Schwartz,et al.  Specificity and Complexity of the Caenorhabditis elegans Innate Immune Response , 2007, Molecular and Cellular Biology.

[15]  S. Hayward,et al.  An explicit test of the phospholipid saturation hypothesis of acquired cold tolerance in Caenorhabditis elegans , 2007, Proceedings of the National Academy of Sciences.

[16]  P. Sanz,et al.  TRIP6 transcriptional co-activator is a novel substrate of AMP-activated protein kinase. , 2006, Cellular signalling.

[17]  M. Hertweck,et al.  Recent aging research in Caenorhabditis elegans , 2006, Experimental Gerontology.

[18]  P. Distefano,et al.  Aging networks in Caenorhabditis elegans: AMP‐activated protein kinase (aak‐2) links multiple aging and metabolism pathways , 2006, Aging cell.

[19]  R. Roy,et al.  Inhibition of germline proliferation during C. elegans dauer development requires PTEN, LKB1 and AMPK signalling , 2006, Development.

[20]  Thomas R Bürglin,et al.  Homologs of the Hh signalling network in C. elegans. , 2006, WormBook : the online review of C. elegans biology.

[21]  R. DePinho,et al.  The Kinase LKB1 Mediates Glucose Homeostasis in Liver and Therapeutic Effects of Metformin , 2005, Science.

[22]  J. Rajan,et al.  The function and expansion of the Patched- and Hedgehog-related homologs in C. elegans. , 2005, Genome research.

[23]  K. Yamamoto,et al.  A Caenorhabditis elegans nutrient response system partially dependent on nuclear receptor NHR-49. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[24]  Donald L Riddle,et al.  Analysis of long-lived C. elegans daf-2 mutants using serial analysis of gene expression. , 2005, Genome research.

[25]  J. Apfeld,et al.  The AMP-activated protein kinase AAK-2 links energy levels and insulin-like signals to lifespan in C. elegans. , 2004, Genes & development.

[26]  D. Hardie.  The AMP-activated protein kinase pathway – new players upstream and downstream , 2004, Journal of Cell Science.

[27]  T. Speed,et al.  GOstat: find statistically overrepresented Gene Ontologies within a group of genes. , 2004, Bioinformatics.

[28]  D. Hall,et al.  Autophagy Genes Are Essential for Dauer Development and Life-Span Extension in C. elegans , 2003, Science.

[29]  Cori Bargmann,et al.  Genes that act downstream of DAF-16 to influence the lifespan of Caenorhabditis elegans , 2003, Nature.

[30]  Jeroen Krijgsveld,et al.  Metabolic labeling of C. elegans and D. melanogaster for quantitative proteomics , 2003, Nature Biotechnology.

[31]  D. Hardie,et al.  Management of cellular energy by the AMP‐activated protein kinase system , 2003, FEBS letters.

[32]  J. McElwee,et al.  Transcriptional outputs of the Caenorhabditis elegans forkhead protein DAF‐16 , 2003, Aging cell.

[33]  S. Hanks,et al.  An Eph receptor sperm-sensing control mechanism for oocyte meiotic maturation in Caenorhabditis elegans. , 2003, Genes & development.

[34]  P. Kuwabara.  The multifaceted C. elegans major sperm protein: an ephrin signaling antagonist in oocyte maturation. , 2003, Genes & development.

[35]  P. Damián-Matsumura,et al.  Cadmium induces α1collagen (I) and metallothionein II gene and alters the antioxidant system in rat hepatic stellate cells , 2002 .

[36]  P. L. Larsen,et al.  DAF-16-dependent and independent expression targets of DAF-2 insulin receptor-like pathway in Caenorhabditis elegans include FKBPs. , 2001, Journal of molecular biology.

[37]  J. Cypser,et al.  Relationship between increased longevity and stress resistance as assessed through gerontogene mutations in Caenorhabditis elegans , 2001, Experimental Gerontology.

[38]  T. Johnson,et al.  The OLD-1 positive regulator of longevity and stress resistance is under DAF-16 regulation in Caenorhabditis elegans , 2001, Current Biology.

[39]  M. Kaminishi,et al.  Cell cycle regulation via p53 phosphorylation by a 5'-AMP activated protein kinase activator, 5-aminoimidazole- 4-carboxamide-1-beta-D-ribofuranoside, in a human hepatocellular carcinoma cell line. , 2001, Biochemical and biophysical research communications.

[40]  V. Matyash,et al.  Distribution and transport of cholesterol in Caenorhabditis elegans. , 2001, Molecular biology of the cell.

[41]  R. Caprioli,et al.  A Sperm Cytoskeletal Protein That Signals Oocyte Meiotic Maturation and Ovulation , 2001, Science.

[42]  G. Jefferis,et al.  A C. elegans patched gene, ptc-1, functions in germ-line cytokinesis. , 2000, Genes & development.

[43]  R. G. Allen,et al.  Oxidative stress and gene regulation. , 2000, Free radical biology & medicine.

[44]  J. Claverie,et al.  The significance of digital gene expression profiles. , 1997, Genome research.

[45]  J. McCarter,et al.  emo-1, a Caenorhabditis elegans Sec61p gamma homologue, is required for oocyte development and ovulation , 1996, The Journal of cell biology.

[46]  C. Kenyon,et al.  A C. elegans mutant that lives twice as long as wild type , 1993, Nature.

[47]  J. Barry,et al.  Molecular analysis of mutations in the Caenorhabditis elegans collagen gene dpy‐7. , 1992, The EMBO journal.

[48]  J. Kramer,et al.  The sqt-1 gene of C. elegans encodes a collagen critical for organismal morphogenesis , 1988, Cell.

[49]  D. Riddle,et al.  dpy-13: A nematode collagen gene that affects body shape , 1988, Cell.

[50]  G. Stein,et al.  Regulation of human histone gene expression: transcriptional and posttranscriptional control in the coupling of histone messenger RNA stability with DNA replication. , 1987, Biochemistry.

[51]  D. Hirsh,et al.  Stage-specific patterns of collagen gene expression during development of Caenorhabditis elegans , 1985, Molecular and cellular biology.

[52]  M. Klass,et al.  Non-ageing developmental variant of Caenorhabditis elegans , 1976, Nature.

[53]  鲁晶晶（编译）,et al.  BMC Research Notes将免费提供更多黑色数据 , 2010 .

[54]  Stefano Geuna,et al.  Oxidative stress triggers cardiac fibrosis in the heart of diabetic rats. , 2008, Endocrinology.

[55]  D. Hardie,et al.  AMP-activated protein kinase: ancient energy gauge provides clues to modern understanding of metabolism. , 2005, Cell metabolism.

[56]  S. Bennett.  Solexa Ltd. , 2004, Pharmacogenomics.

[57]  D. Riddle,et al.  Positive selection of Caenorhabditis elegans mutants with increased stress resistance and longevity. , 2003, Genetics.

[58]  P. Damián-Matsumura,et al.  Cadmium induces alpha(1)collagen (I) and metallothionein II gene and alters the antioxidant system in rat hepatic stellate cells. , 2002, Toxicology.

[59]  J. McCarter,et al.  On the control of oocyte meiotic maturation and ovulation in Caenorhabditis elegans. , 1999, Developmental biology.