Evaluation of Linked, Open Data Sources for Mining Adverse Drug Reaction Signals
暂无分享,去创建一个
Vassilis Koutkias | Nicos Maglaveras | Pantelis Natsiavas | N. Maglaveras | V. Koutkias | P. Natsiavas
[1] Yiannis Kompatsiaris,et al. GalenOWL: Ontology-based drug recommendations discovery , 2012, J. Biomed. Semant..
[2] Oktie Hassanzadeh,et al. Extending the “Web of Drug Identity” with Knowledge Extracted from United States Product Labels , 2013, AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science.
[3] Hyeon-Eui Kim,et al. Deep mining heterogeneous networks of biomedical linked data to predict novel drug‐target associations , 2017, Bioinform..
[4] Vassilis Koutkias,et al. A Public Health Surveillance Platform Exploiting Free-Text Sources via Natural Language Processing and Linked Data: Application in Adverse Drug Reaction Signal Detection Using PubMed and Twitter , 2016, KR4HC/ProHealth@HEC.
[5] R. Altman,et al. Pharmacogenomics Knowledge for Personalized Medicine , 2012, Clinical pharmacology and therapeutics.
[6] Carole A. Goble,et al. API-centric Linked Data integration: The Open PHACTS Discovery Platform case study , 2014, J. Web Semant..
[7] M. Schuemie,et al. Defining a Reference Set to Support Methodological Research in Drug Safety , 2013, Drug Safety.
[8] Christophe G. Lambert,et al. Bridging Islands of Information to Establish an Integrated Knowledge Base of Drugs and Health Outcomes of Interest , 2014, Drug Safety.
[9] Damian Szklarczyk,et al. STITCH 5: augmenting protein–chemical interaction networks with tissue and affinity data , 2015, Nucleic Acids Res..
[10] Yen S. Low,et al. Text Mining for Adverse Drug Events: the Promise, Challenges, and State of the Art , 2014, Drug Safety.
[11] Milos Jovanovik,et al. Consolidating drug data on a global scale using Linked Data , 2017, J. Biomed. Semant..
[12] Tom Heath,et al. Linked Data: Evolving the Web into a Global Data Space , 2011, Linked Data.
[13] Michel Dumontier,et al. Bio2RDF Release 2: Improved Coverage, Interoperability and Provenance of Life Science Linked Data , 2013, ESWC.
[14] Paloma Martínez,et al. DINTO: Using OWL Ontologies and SWRL Rules to Infer Drug-Drug Interactions and Their Mechanisms , 2015, J. Chem. Inf. Model..
[15] Vassilis Koutkias,et al. Large-scale adverse effects related to treatment evidence standardization (LAERTES): an open scalable system for linking pharmacovigilance evidence sources with clinical data , 2017, J. Biomed. Semant..
[16] Olivier Bodenreider,et al. A time-indexed reference standard of adverse drug reactions , 2014, Scientific Data.
[17] Peer Bork,et al. The SIDER database of drugs and side effects , 2015, Nucleic Acids Res..
[18] Z. Bankowski,et al. Council for International Organizations of Medical Sciences , 1991 .
[19] Bin Chen,et al. Assessing Drug Target Association Using Semantic Linked Data , 2012, PLoS Comput. Biol..
[20] Jens Lehmann,et al. Quality assessment for Linked Data: A Survey , 2015, Semantic Web.
[21] Cui Tao,et al. Exploring the Pharmacogenomics Knowledge Base (PharmGKB) for Repositioning Breast Cancer Drugs by Leveraging Web Ontology Language (OWL) and Cheminformatics Approaches , 2013, Pacific Symposium on Biocomputing.
[22] Takahiro Kawamura,et al. IMAGE-BASED LITERAL NODE MATCHING FOR LINKED DATA INTEGRATION , 2014 .
[23] Martijn J. Schuemie,et al. A Reference Standard for Evaluation of Methods for Drug Safety Signal Detection Using Electronic Healthcare Record Databases , 2012, Drug Safety.
[24] David S. Wishart,et al. DrugBank 4.0: shedding new light on drug metabolism , 2013, Nucleic Acids Res..
[25] Peter J. Denning. The locality principle , 2005, Commun. ACM.
[26] J. Bajorath,et al. Learning from 'big data': compounds and targets. , 2014, Drug discovery today.
[27] James A. Hendler,et al. The Semantic Web" in Scientific American , 2001 .
[28] Asunción Gómez-Pérez,et al. The NeOn Methodology for Ontology Engineering , 2012, Ontology Engineering in a Networked World.
[29] Yiannis Kompatsiaris,et al. Panacea, a semantic-enabled drug recommendations discovery framework , 2014, VDOS+DO@ICBO.
[30] Chris T. A. Evelo,et al. Applying linked data approaches to pharmacology: Architectural decisions and implementation , 2014, Semantic Web.
[31] Adrien Coulet,et al. Learning from biomedical linked data to suggest valid pharmacogenes , 2017, Journal of Biomedical Semantics.
[32] Benjamin M. Good,et al. WikiGenomes: an open web application for community consumption and curation of gene annotation data in Wikidata , 2017, bioRxiv.
[33] José Leomar Todesco,et al. Knowledge Engineering: Survey of Methodologies, Techniques and Tools , 2014 .
[34] Vít Novácek,et al. Using Drug Similarities for Discovery of Possible Adverse Reactions , 2016, AMIA.
[35] Sirarat Sarntivijai,et al. Use of Biomedical Ontologies for Integration of Biological Knowledge for Learning and Prediction of Adverse Drug Reactions , 2017, Gene regulation and systems biology.
[36] Olivier Bodenreider,et al. The Unified Medical Language System (UMLS): integrating biomedical terminology , 2004, Nucleic Acids Res..
[37] R. Doyle. The American terrorist. , 2001, Scientific American.
[38] Janet Sultana,et al. Clinical and economic burden of adverse drug reactions , 2013, Journal of pharmacology & pharmacotherapeutics.
[39] Egon L. Willighagen,et al. Linked open drug data for pharmaceutical research and development , 2011, J. Cheminformatics.
[40] Martin Necaský,et al. Drug Encyclopedia - Linked Data Application for Physicians , 2015, International Semantic Web Conference.
[41] Mark A. Musen,et al. BioPortal as a dataset of linked biomedical ontologies and terminologies in RDF , 2013, Semantic Web.
[42] Benjamin M. Good,et al. Wikidata: A platform for data integration and dissemination for the life sciences and beyond , 2015, bioRxiv.