Evidence of link between quorum sensing and sugar metabolism in Escherichia coli revealed via cocrystal structures of LsrK and HPr
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Kristina T. Stephens | W. Bentley | Xiaochu Ma | H. Sintim | K. Ryu | Kun Cho | J. Suh | Y. Eo | J. Ha | P. Hauk | S. Cha | Migyeong Jeong
[1] V. Sourjik,et al. Autoinducer 2-Dependent Escherichia coli Biofilm Formation Is Enhanced in a Dual-Species Coculture , 2017, Applied and Environmental Microbiology.
[2] K. Ryu,et al. Increasing the soluble expression and crystallization of the Escherichia coli quorum-sensing protein LsrK. , 2017, Acta crystallographica. Section F, Structural biology communications.
[3] William E Bentley,et al. Engineered probiotic Escherichia coli can eliminate and prevent Pseudomonas aeruginosa gut infection in animal models , 2017, Nature Communications.
[4] William E. Bentley,et al. Mathematical model of LsrR-binding and derepression in Escherichia coli K12 , 2017, J. Bioinform. Comput. Biol..
[5] K. Gerdes,et al. Mechanisms of bacterial persistence during stress and antibiotic exposure , 2016, Science.
[6] V. Sourjik,et al. Chemotaxis towards autoinducer 2 mediates autoaggregation in Escherichia coli , 2016, Nature Communications.
[7] M. Omar Din,et al. Synchronized cycles of bacterial lysis for in vivo delivery , 2016, Nature.
[8] Liisa Holm,et al. Dali server update , 2016, Nucleic Acids Res..
[9] Tyler J. Ford,et al. Synthetic biology expands chemical control of microorganisms. , 2015, Current opinion in chemical biology.
[10] Roger G. Linington,et al. Living in the matrix: assembly and control of Vibrio cholerae biofilms , 2015, Nature Reviews Microbiology.
[11] J. Eshleman,et al. Advancements in the Development of HIF-1α-Activated Protein Switches for Use in Enzyme Prodrug Therapy , 2014, PloS one.
[12] J. Deutscher,et al. The Bacterial Phosphoenolpyruvate:Carbohydrate Phosphotransferase System: Regulation by Protein Phosphorylation and Phosphorylation-Dependent Protein-Protein Interactions , 2014, Microbiology and Molecular Reviews.
[13] Xavier Robert,et al. Deciphering key features in protein structures with the new ENDscript server , 2014, Nucleic Acids Res..
[14] Y. Seok,et al. HPr antagonizes the anti-σ70 activity of Rsd in Escherichia coli , 2013, Proceedings of the National Academy of Sciences.
[15] Kyoung-Seok Ryu,et al. Crystal structures of the LsrR proteins complexed with phospho-AI-2 and two signal-interrupting analogues reveal distinct mechanisms for ligand recognition. , 2013, Journal of the American Chemical Society.
[16] Kim D Janda,et al. Mechanistic insights into the LsrK kinase required for autoinducer-2 quorum sensing activation. , 2013, Journal of the American Chemical Society.
[17] E. Baker,et al. Structure and Function of Human Xylulokinase, an Enzyme with Important Roles in Carbohydrate Metabolism* , 2012, The Journal of Biological Chemistry.
[18] Paulo B. Correia,et al. Phosphoenolpyruvate phosphotransferase system regulates detection and processing of the quorum sensing signal autoinducer‐2 , 2012, Molecular microbiology.
[19] P. Zwart,et al. Towards automated crystallographic structure refinement with phenix.refine , 2012, Acta crystallographica. Section D, Biological crystallography.
[20] Randy J. Read,et al. Overview of the CCP4 suite and current developments , 2011, Acta crystallographica. Section D, Biological crystallography.
[21] G. Clore,et al. Solution structure of the 128 kDa enzyme I dimer from Escherichia coli and its 146 kDa complex with HPr using residual dipolar couplings and small- and wide-angle X-ray scattering. , 2010, Journal of the American Chemical Society.
[22] W. Bentley,et al. Synthetic analogs tailor native AI-2 signaling across bacterial species. , 2010, Journal of the American Chemical Society.
[23] Ahmad S. Khalil,et al. Synthetic biology: applications come of age , 2010, Nature Reviews Genetics.
[24] Sara Hooshangi,et al. Autonomous induction of recombinant proteins by minimally rewiring native quorum sensing regulon of E. coli. , 2010, Metabolic engineering.
[25] Vincent B. Chen,et al. PHENIX: a comprehensive Python-based system for macromolecular structure solution , 2010, Acta crystallographica. Section D, Biological crystallography.
[26] Liping Zhao,et al. LsrR-binding site recognition and regulatory characteristics in Escherichia coli AI-2 quorum sensing , 2009, Cell Research.
[27] J. Kaplan,et al. Screen for Leukotoxin Mutants in Aggregatibacter actinomycetemcomitans: Genes of the Phosphotransferase System Are Required for Leukotoxin Biosynthesis , 2008, Infection and Immunity.
[28] Jeong Hwan Kim,et al. Phosphorylation and processing of the quorum-sensing molecule autoinducer-2 in enteric bacteria. , 2007, ACS chemical biology.
[29] H. Stahlberg,et al. Structural and kinetic studies of induced fit in xylulose kinase from Escherichia coli. , 2007, Journal of molecular biology.
[30] Klaus Winzer,et al. Making 'sense' of metabolism: autoinducer-2, LUXS and pathogenic bacteria , 2005, Nature Reviews Microbiology.
[31] William E Bentley,et al. Cyclic AMP (cAMP) and cAMP Receptor Protein Influence both Synthesis and Uptake of Extracellular Autoinducer 2 in Escherichia coli , 2005, Journal of bacteriology.
[32] B. Bassler,et al. Regulation of Uptake and Processing of the Quorum-Sensing Autoinducer AI-2 in Escherichia coli , 2005, Journal of bacteriology.
[33] Conrad C. Huang,et al. UCSF Chimera—A visualization system for exploratory research and analysis , 2004, J. Comput. Chem..
[34] Moriz Mayer,et al. Group epitope mapping by saturation transfer difference NMR to identify segments of a ligand in direct contact with a protein receptor. , 2001, Journal of the American Chemical Society.
[35] H. Westerhoff,et al. Understanding Glucose Transport by the Bacterial Phosphoenolpyruvate:Glycose Phosphotransferase System on the Basis of Kinetic Measurements in Vitro * , 2000, The Journal of Biological Chemistry.
[36] B. Wanner,et al. One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[37] S J Remington,et al. Glycerol kinase from Escherichia coli and an Ala65-->Thr mutant: the crystal structures reveal conformational changes with implications for allosteric regulation. , 1998, Structure.
[38] R J Read,et al. Crystallography & NMR system: A new software suite for macromolecular structure determination. , 1998, Acta crystallographica. Section D, Biological crystallography.
[39] Marc S. Lewis,et al. High Affinity Binding and Allosteric Regulation ofEscherichia coli Glycogen Phosphorylase by the Histidine Phosphocarrier Protein, HPr* , 1997, The Journal of Biological Chemistry.
[40] E. Greenberg,et al. Cross-species induction of luminescence in the quorum-sensing bacterium Vibrio harveyi , 1997, Journal of bacteriology.
[41] M H Saier,et al. Cyclic AMP-independent catabolite repression in bacteria. , 1996, FEMS microbiology letters.
[42] G. Robillard,et al. High-resolution structure of the phosphorylated form of the histidine-containing phosphocarrier protein HPr from Escherichia coli determined by restrained molecular dynamics from NMR-NOE data. , 1995, Journal of molecular biology.
[43] S J Remington,et al. Structure of the regulatory complex of Escherichia coli IIIGlc with glycerol kinase , 1993, Science.
[44] R. Kolter,et al. An E. coli promoter induced by the cessation of growth , 1987, Molecular microbiology.
[45] J. Hurley. The sugar kinase/heat shock protein 70/actin superfamily: implications of conserved structure for mechanism. , 1996, Annual review of biophysics and biomolecular structure.
[46] T. Steeves,et al. Enzyme I of the phosphoenolpyruvate: sugar phosphotransferase system of Escherichia coli. Purification to homogeneity and some properties. , 1980, Canadian journal of biochemistry.
[47] Jeffrey H. Miller. Experiments in molecular genetics , 1972 .
[48] M. Chang,et al. Molecular Systems Biology Peer Review Process File Engineering Microbes to Sense and Eradicate Pseudomonas Aeruginosa, a Human Pathogen Transaction Report , 2022 .