Apparent diffusion coefficients from high angular resolution diffusion imaging: Estimation and applications

High angular resolution diffusion imaging has recently been of great interest in characterizing non‐Gaussian diffusion processes. One important goal is to obtain more accurate fits of the apparent diffusion processes in these non‐Gaussian regions, thus overcoming the limitations of classical diffusion tensor imaging. This paper presents an extensive study of high‐order models for apparent diffusion coefficient estimation and illustrates some of their applications. Using a meaningful modified spherical harmonics basis to capture the physical constraints of the problem, a new regularization algorithm is proposed. The new smoothing term is based on the Laplace–Beltrami operator and its closed form implementation is used in the fitting procedure. Next, the linear transformation between the coefficients of a spherical harmonic series of order ℓ and independent elements of a rank‐ℓ high‐order diffusion tensor is explicitly derived. This relation allows comparison of the state‐of‐the‐art anisotropy measures computed from spherical harmonics and tensor coefficients. Published results are reproduced accurately and it is also possible to recover voxels with isotropic, single fiber anisotropic, and multiple fiber anisotropic diffusion. Validation is performed on apparent diffusion coefficients from synthetic data, from a biological phantom, and from a human brain dataset. Magn Reson Med, 2006. © 2006 Wiley‐Liss, Inc.

[1]  J. E. Tanner,et al.  Spin diffusion measurements : spin echoes in the presence of a time-dependent field gradient , 1965 .

[2]  P. Grenier,et al.  MR imaging of intravoxel incoherent motions: application to diffusion and perfusion in neurologic disorders. , 1986, Radiology.

[3]  Simon J. Doran,et al.  NMR imaging of fluids in porous solids , 1990, Philosophical Transactions of the Royal Society of London. Series A: Physical and Engineering Sciences.

[4]  J. Tsuruda,et al.  Diffusion-weighted MR imaging of anisotropic water diffusion in cat central nervous system. , 1990, Radiology.

[5]  P. Basser,et al.  Estimation of the effective self-diffusion tensor from the NMR spin echo. , 1994, Journal of magnetic resonance. Series B.

[6]  P. Basser,et al.  MR diffusion tensor spectroscopy and imaging. , 1994, Biophysical journal.

[7]  Guido Gerig,et al.  Parametrization of Closed Surfaces for 3-D Shape Description , 1995, Comput. Vis. Image Underst..

[8]  Bengt Jönsson,et al.  Restricted Diffusion in Cylindrical Geometry , 1995 .

[9]  P. Basser,et al.  Microstructural and physiological features of tissues elucidated by quantitative-diffusion-tensor MRI. , 1996, Journal of magnetic resonance. Series B.

[10]  J Sijbers,et al.  Estimation of the noise in magnitude MR images. , 1998, Magnetic resonance imaging.

[11]  J. Sijbers,et al.  Signal and noise estimation from magnetic resonance images , 1998 .

[12]  C. Poupon Detection des faisceaux de fibres de la substance blanche pour l'etude de la connectivite anatomique cerebrale , 1999 .

[13]  ProblemsPer Christian HansenDepartment The L-curve and its use in the numerical treatment of inverse problems , 2000 .

[14]  V. Wedeen,et al.  Mapping fiber orientation spectra in cerebral white matter with Fourier-transform diffusion MRI , 2000 .

[15]  Rachid Deriche,et al.  Diffusion tensor regularization with constraints preservation , 2001, Proceedings of the 2001 IEEE Computer Society Conference on Computer Vision and Pattern Recognition. CVPR 2001.

[16]  N. Makris,et al.  High angular resolution diffusion imaging reveals intravoxel white matter fiber heterogeneity , 2002, Magnetic resonance in medicine.

[17]  S. Arridge,et al.  Detection and modeling of non‐Gaussian apparent diffusion coefficient profiles in human brain data , 2002, Magnetic resonance in medicine.

[18]  D. Tuch Diffusion MRI of complex tissue structure , 2002 .

[19]  Carl-Fredrik Westin,et al.  Processing and visualization for diffusion tensor MRI , 2002, Medical Image Anal..

[20]  L. Frank Characterization of anisotropy in high angular resolution diffusion‐weighted MRI , 2002, Magnetic resonance in medicine.

[21]  R Mark Henkelman,et al.  Orientational diffusion reflects fiber structure within a voxel , 2002, Magnetic resonance in medicine.

[22]  T. Mareci,et al.  Generalized diffusion tensor imaging and analytical relationships between diffusion tensor imaging and high angular resolution diffusion imaging , 2003, Magnetic resonance in medicine.

[23]  Rachid Deriche,et al.  Variational Beltrami flows over manifolds , 2003, Proceedings 2003 International Conference on Image Processing (Cat. No.03CH37429).

[24]  Kalvis M. Jansons,et al.  Persistent angular structure: new insights from diffusion magnetic resonance imaging data , 2003 .

[25]  Zhizhou Wang,et al.  Simultaneous smoothing and estimation of the tensor field from diffusion tensor MRI , 2003, 2003 IEEE Computer Society Conference on Computer Vision and Pattern Recognition, 2003. Proceedings..

[26]  Rachid Deriche,et al.  The Beltrami flow over implicit manifolds , 2003, Proceedings Ninth IEEE International Conference on Computer Vision.

[27]  Rachid Deriche,et al.  Variational frameworks for DT-MRI estimation, regularization and visualization , 2003, Proceedings Ninth IEEE International Conference on Computer Vision.

[28]  Rachid Deriche,et al.  Segmentation of 3D Probability Density Fields by Surface Evolution: Application to Diffusion MRI , 2004, MICCAI.

[29]  Rachid Deriche,et al.  Regularizing Flows for Constrained Matrix-Valued Images , 2004 .

[30]  Alan Connelly,et al.  Direct estimation of the fiber orientation density function from diffusion-weighted MRI data using spherical deconvolution , 2004, NeuroImage.

[31]  Baba C. Vemuri,et al.  Fiber orientation mapping using generalized diffusion tensor imaging , 2004, 2004 2nd IEEE International Symposium on Biomedical Imaging: Nano to Macro (IEEE Cat No. 04EX821).

[32]  L. Gia,et al.  Approximation of linear partial differential equations on spheres , 2004 .

[33]  B. Vemuri,et al.  Estimation, smoothing, and characterization of apparent diffusion coefficient profiles from High Angular Resolution DWI , 2004, Proceedings of the 2004 IEEE Computer Society Conference on Computer Vision and Pattern Recognition, 2004. CVPR 2004..

[34]  Rachid Deriche,et al.  Regularizing Flows for Constrained Matrix-Valued Images , 2004, Journal of Mathematical Imaging and Vision.

[35]  Rachid Deriche,et al.  A linear and regularized ODF estimation algorithm to recover multiple fibers in Q-Ball imaging , 2004 .

[36]  Rachid Deriche,et al.  Inferring White Matter Geometry from Di.usion Tensor MRI: Application to Connectivity Mapping , 2004, ECCV.

[37]  Yunmei Chen,et al.  Cumulative residual entropy: a new measure of information , 2004, IEEE Transactions on Information Theory.

[38]  Baba C. Vemuri,et al.  Estimation, smoothing, and characterization of apparent diffusion coefficient profiles from High Angular Resolution DWI , 2004, CVPR 2004.

[39]  D. Tuch Q‐ball imaging , 2004, Magnetic resonance in medicine.

[40]  Thomas L Chenevert,et al.  Clinical applications of diffusion tensor imaging , 2004, Journal of magnetic resonance imaging : JMRI.

[41]  Peter Savadjiev,et al.  3D Curve Inference for Diffusion MRI Regularization , 2005, MICCAI.

[42]  B. Vemuri,et al.  Generalized scalar measures for diffusion MRI using trace, variance, and entropy , 2005, Magnetic resonance in medicine.

[43]  Yijun Liu,et al.  Apparent Diffusion Coefficient Approximation and Diffusion Anisotropy Characterization in DWI , 2005, IPMI.

[44]  Gareth J. Barker,et al.  Optimal imaging parameters for fiber-orientation estimation in diffusion MRI , 2005, NeuroImage.

[45]  Abbas F. Sadikot,et al.  Flow-based fiber tracking with diffusion tensor and q-ball data: Validation and comparison to principal diffusion direction techniques , 2005, NeuroImage.

[46]  Milan Sonka,et al.  Information Processing in Medical Imaging, 19th International Conference, IPMI 2005, Glenwood Springs, CO, USA, July 10-15, 2005, Proceedings , 2005, IPMI.

[47]  Rachid Deriche,et al.  A Riemannian Approach to Diffusion Tensor Images Segmentation , 2005, IPMI.

[48]  Rachid Deriche,et al.  Statistics on the Manifold of Multivariate Normal Distributions: Theory and Application to Diffusion Tensor MRI Processing , 2006, Journal of Mathematical Imaging and Vision.

[49]  David H. Laidlaw,et al.  Visualization and image processing of tensor fields , 2006 .