A Look-Ahead Simulation Algorithm for DBN Models of Biochemical Pathways
暂无分享,去创建一个
Matthieu Pichené | Eric Fabre | Blaise Genest | Grégory Batt | Sucheendra K. Palaniappan | É. Fabre | B. Genest | M. Pichené | S. K. Palaniappan | Grégory Batt
[1] Jacky L. Snoep,et al. BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems , 2005, Nucleic Acids Res..
[2] Thomas A. Henzinger,et al. Approximation of event probabilities in noisy cellular processes , 2011, Theor. Comput. Sci..
[3] P. S. Thiagarajan,et al. A Hybrid Factored Frontier Algorithm for Dynamic Bayesian Networks with a Biopathways Application , 2012, IEEE/ACM Transactions on Computational Biology and Bioinformatics.
[4] Michael Hucka,et al. A Correction to the Review Titled "Rules for Modeling Signal-Transduction Systems" by W. S. Hlavacek et al. , 2006, Science's STKE.
[5] K. H. Lee,et al. The statistical mechanics of complex signaling networks: nerve growth factor signaling , 2004, Physical biology.
[6] Radu Grosu,et al. Monte Carlo Model Checking , 2005, TACAS.
[7] Xavier Boyen,et al. Tractable Inference for Complex Stochastic Processes , 1998, UAI.
[8] Nir Friedman,et al. Probabilistic Graphical Models - Principles and Techniques , 2009 .
[9] Kevin P. Murphy,et al. The Factored Frontier Algorithm for Approximate Inference in DBNs , 2001, UAI.
[10] David Hsu,et al. A Computational and Experimental Study of the Regulatory Mechanisms of the Complement System , 2011, PLoS Comput. Biol..
[11] David Hsu,et al. Probabilistic approximations of ODEs based bio-pathway dynamics , 2011, Theor. Comput. Sci..
[12] Axel Legay,et al. A Bayesian Approach to Model Checking Biological Systems , 2009, CMSB.
[13] Thomas A. Henzinger,et al. Sliding Window Abstraction for Infinite Markov Chains , 2009, CAV.
[14] Dirk Drasdo,et al. Modeling Dynamics of Cell-to-Cell Variability in TRAIL-Induced Apoptosis Explains Fractional Killing and Predicts Reversible Resistance , 2014, PLoS Comput. Biol..
[15] David Hsu,et al. Probabilistic Approximations of Signaling Pathway Dynamics , 2009, CMSB.
[16] Marta Kwiatkowska,et al. Probabilistic model checking for systems biology , 2011 .
[17] François Fages,et al. On the Analysis of Numerical Data Time Series in Temporal Logic , 2007, CMSB.
[18] David R. Gilbert,et al. A Model Checking Approach to the Parameter Estimation of Biochemical Pathways , 2008, CMSB.
[19] David R. Gilbert,et al. Analysis of Signalling Pathways Using Continuous Time Markov Chains , 2006, Trans. Comp. Sys. Biology.
[20] Marta Z. Kwiatkowska,et al. PRISM: Probabilistic Symbolic Model Checker , 2002, Computer Performance Evaluation / TOOLS.
[21] Vincent Danos,et al. Rule-Based Modelling of Cellular Signalling , 2007, CONCUR.
[22] P. S. Thiagarajan,et al. Approximate probabilistic analysis of biopathway dynamics , 2012, Bioinform..