Fluctuations in extended mass-action-law dynamics

Abstract Dynamics of chemical reactions, called mass-action-law dynamics, serves in this paper as a motivating example for investigating geometry of nonlinear non-equilibrium thermodynamics and for studying the ways to extend a mesoscopic dynamics to more microscopic levels. The geometry in which the physics involved is naturally expressed appears to be the contact geometry. Two extensions are discussed in detail. In one, the reaction fluxes or forces are adopted as independent state variables, the other takes into account fluctuations. All the time evolution equations arising in the paper are proven to be compatible among themselves and with equilibrium thermodynamics. A quantity closely related to the entropy production plays in the extended dynamics with fluxes and forces as well as in the corresponding fluctuating dynamics the same role that entropy plays in the original mass-action-law dynamics.

[1]  Stanislaw Sieniutycz,et al.  From a least action principle to mass action law and extended affinity , 1987 .

[2]  Kingshuk Ghosh,et al.  Measuring flux distributions for diffusion in the small-numbers limit. , 2007, The journal of physical chemistry. B.

[3]  Jan V. Sengers,et al.  Hydrodynamic Fluctuations in Fluids and Fluid Mixtures , 2006 .

[4]  I. Dzyaloshinskiǐ,et al.  Poisson brackets in condensed matter physics , 1980 .

[5]  M. Grmela Bracket formulation of diffusion-convection equations , 1986 .

[6]  P. Mazur Mesoscopic nonequilibrium thermodynamics; irreversible processes and fluctuations , 1999 .

[7]  P. Mazur,et al.  Non-equilibrium thermodynamics, , 1963 .

[8]  I. Muller,et al.  Zum Paradoxon der Warmeleitungstheorie , 1967 .

[9]  Kingshuk Ghosh,et al.  Teaching the principles of statistical dynamics. , 2006, American journal of physics.

[10]  Allan N. Kaufman,et al.  DISSIPATIVE HAMILTONIAN SYSTEMS: A UNIFYING PRINCIPLE , 1984 .

[11]  D. Jou,et al.  Temperature in non-equilibrium states: a review of open problems and current proposals , 2003 .

[12]  G. Lebon,et al.  Extended Irreversible Thermodynamics , 2010 .

[13]  Miroslav Grmela,et al.  Dynamics and thermodynamics of complex fluids. II. Illustrations of a general formalism , 1997 .

[14]  D. Gillespie The Chemical Langevin and Fokker−Planck Equations for the Reversible Isomerization Reaction† , 2002 .

[15]  Philip J. Morrison,et al.  Bracket formulation for irreversible classical fields , 1984 .

[16]  P. Rysselberghe,et al.  Thermodynamic theory of affinity : a book of principles , 1937 .

[17]  V. Arnold Mathematical Methods of Classical Mechanics , 1974 .

[18]  D. Jou,et al.  Non-equilibrium thermodynamic potential and flux fluctuation theorem , 2009 .

[19]  Miroslav Grmela,et al.  Dynamics and thermodynamics of complex fluids. I. Development of a general formalism , 1997 .

[20]  Miroslav Grmela,et al.  Multiscale Equilibrium and Nonequilibrium Thermodynamics in Chemical Engineering , 2010 .

[21]  I. Müller,et al.  Rational Extended Thermodynamics , 1993 .

[22]  Martin Feinberg,et al.  On chemical kinetics of a certain class , 1972 .

[23]  D. Bedeaux,et al.  Non-equilibrium Thermodynamics of Heterogeneous Systems , 2008, Series on Advances in Statistical Mechanics.

[24]  J. M. Rubi,et al.  Nonequilibrium thermodynamics and hydrodynamic fluctuations , 1999 .

[25]  Grmela Thermodynamics of driven systems. , 1993, Physical review. E, Statistical physics, plasmas, fluids, and related interdisciplinary topics.