Mitochondrial energetics in the kidney

The kidney requires a large number of mitochondria to remove waste from the blood and regulate fluid and electrolyte balance. Mitochondria provide the energy to drive these important functions and can adapt to different metabolic conditions through a number of signalling pathways (for example, mechanistic target of rapamycin (mTOR) and AMP-activated protein kinase (AMPK) pathways) that activate the transcriptional co-activator peroxisome proliferator-activated receptor-γ co-activator 1α (PGC1α), and by balancing mitochondrial dynamics and energetics to maintain mitochondrial homeostasis. Mitochondrial dysfunction leads to a decrease in ATP production, alterations in cellular functions and structure, and the loss of renal function. Persistent mitochondrial dysfunction has a role in the early stages and progression of renal diseases, such as acute kidney injury (AKI) and diabetic nephropathy, as it disrupts mitochondrial homeostasis and thus normal kidney function. Improving mitochondrial homeostasis and function has the potential to restore renal function, and administering compounds that stimulate mitochondrial biogenesis can restore mitochondrial and renal function in mouse models of AKI and diabetes mellitus. Furthermore, inhibiting the fission protein dynamin 1-like protein (DRP1) might ameliorate ischaemic renal injury by blocking mitochondrial fission.

[1]  P. Overbeek,et al.  Mitochondrial fission triggered by hyperglycemia is mediated by ROCK1 activation in podocytes and endothelial cells. , 2012, Cell metabolism.

[2]  Z. Dong,et al.  Regulation of mitochondrial dynamics in acute kidney injury in cell culture and rodent models. , 2009, The Journal of clinical investigation.

[3]  O. Shirihai,et al.  Mitochondrial fusion, fission and autophagy as a quality control axis: the bioenergetic view. , 2008, Biochimica et biophysica acta.

[4]  Y. Saeki,et al.  Phosphorylated ubiquitin chain is the genuine Parkin receptor , 2015, The Journal of cell biology.

[5]  E. Bottinger,et al.  Mitochondrial Pathology and Glycolytic Shift during Proximal Tubule Atrophy after Ischemic AKI. , 2016, Journal of the American Society of Nephrology : JASN.

[6]  Rick B. Vega,et al.  Transcriptional integration of mitochondrial biogenesis , 2012, Trends in Endocrinology & Metabolism.

[7]  H. Szeto,et al.  Serendipity and the Discovery of Novel Compounds That Restore Mitochondrial Plasticity , 2014, Clinical pharmacology and therapeutics.

[8]  K. Mihara,et al.  New insights into the function and regulation of mitochondrial fission. , 2013, Biochimica et biophysica acta.

[9]  D. Fagundes,et al.  Expression of oxidative stress and antioxidant defense genes in the kidney of inbred mice after intestinal ischemia and reperfusion. , 2013, Acta cirurgica brasileira.

[10]  T. Jiang,et al.  Regulation of Renal Fatty Acid and Cholesterol Metabolism, Inflammation, and Fibrosis in Akita and OVE26 Mice With Type 1 Diabetes , 2006, Diabetes.

[11]  R. Scarpulla,et al.  Activation of the human mitochondrial transcription factor A gene by nuclear respiratory factors: a potential regulatory link between nuclear and mitochondrial gene expression in organelle biogenesis. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[12]  V. Vaidya,et al.  Ischemic kidney injury and mechanisms of tissue repair , 2011, Wiley interdisciplinary reviews. Systems biology and medicine.

[13]  Yau-Huei Wei,et al.  Mitochondrial biogenesis and mitochondrial DNA maintenance of mammalian cells under oxidative stress. , 2005, The international journal of biochemistry & cell biology.

[14]  J. Gerich Role of the kidney in normal glucose homeostasis and in the hyperglycaemia of diabetes mellitus: therapeutic implications , 2010, Diabetic medicine : a journal of the British Diabetic Association.

[15]  Weng-Lang Yang,et al.  Stimulation of carnitine palmitoyltransferase 1 improves renal function and attenuates tissue damage after ischemia/reperfusion. , 2012, The Journal of surgical research.

[16]  R. Youle,et al.  Proteasome and p97 mediate mitophagy and degradation of mitofusins induced by Parkin , 2010, The Journal of cell biology.

[17]  Z. Dong,et al.  Mitophagy: Basic Mechanism and Potential Role in Kidney Diseases , 2015, Kidney Diseases.

[18]  J. Forbes,et al.  Tapping into Mitochondria to Find Novel Targets for Diabetes Complications. , 2016, Current drug targets.

[19]  J. Kellum,et al.  Acute kidney injury: what's the prognosis? , 2011, Nature Reviews Nephrology.

[20]  V. Haase Hypoxia-inducible factors in the kidney. , 2006, American journal of physiology. Renal physiology.

[21]  A. Singh,et al.  Explicit role of peroxisome proliferator-activated receptor gamma in gallic acid-mediated protection against ischemia-reperfusion-induced acute kidney injury in rats. , 2014, The Journal of surgical research.

[22]  C. Handschin,et al.  Loss of Renal Tubular PGC-1α Exacerbates Diet-Induced Renal Steatosis and Age-Related Urinary Sodium Excretion in Mice , 2016, PloS one.

[23]  J. Grosgeorge,et al.  Nuclear gene OPA1, encoding a mitochondrial dynamin-related protein, is mutated in dominant optic atrophy , 2000, Nature Genetics.

[24]  G. Lenaers,et al.  OPA1 (Kjer type) dominant optic atrophy: a novel mitochondrial disease. , 2002, Molecular genetics and metabolism.

[25]  Song-min Huang,et al.  Early protective effect of mitofusion 2 overexpression in STZ-induced diabetic rat kidney , 2012, Endocrine.

[26]  J. Fernandez-Checa,et al.  Glutathione and mitochondria , 2014, Front. Pharmacol..

[27]  N. Hattori,et al.  PINK1 stabilized by mitochondrial depolarization recruits Parkin to damaged mitochondria and activates latent Parkin for mitophagy , 2010, The Journal of cell biology.

[28]  P. Xue,et al.  Mitochondrial outer-membrane protein FUNDC1 mediates hypoxia-induced mitophagy in mammalian cells , 2012, Nature Cell Biology.

[29]  R. Touyz,et al.  NADPH oxidases, reactive oxygen species, and the kidney: friend and foe. , 2013, Journal of the American Society of Nephrology : JASN.

[30]  R. Schnellmann,et al.  Agonism of the 5-Hydroxytryptamine 1F Receptor Promotes Mitochondrial Biogenesis and Recovery from Acute Kidney Injury , 2014, The Journal of Pharmacology and Experimental Therapeutics.

[31]  Rick B. Vega,et al.  The Coactivator PGC-1 Cooperates with Peroxisome Proliferator-Activated Receptor α in Transcriptional Control of Nuclear Genes Encoding Mitochondrial Fatty Acid Oxidation Enzymes , 2000, Molecular and Cellular Biology.

[32]  D. Kelly,et al.  PGC-1 coactivators: inducible regulators of energy metabolism in health and disease. , 2006, The Journal of clinical investigation.

[33]  A. Layton,et al.  Modeling glucose metabolism and lactate production in the kidney. , 2017, Mathematical biosciences.

[34]  M. Rewers,et al.  Editorial: Mortality and renal disease in type 1 diabetes mellitus--progress made, more to be done. , 2006, The Journal of clinical endocrinology and metabolism.

[35]  Z. Elazar,et al.  Regulation of autophagy by ROS: physiology and pathology. , 2011, Trends in biochemical sciences.

[36]  R. Scarpulla Transcriptional paradigms in mammalian mitochondrial biogenesis and function. , 2008, Physiological reviews.

[37]  D. Chan,et al.  The mitochondrial fission receptor MiD51 requires ADP as a cofactor. , 2014, Structure.

[38]  A K Mortagy,et al.  Risk factors and outcome of hospital-acquired acute renal failure (clinical epidemiologic study). , 1988, The Journal of the Egyptian Public Health Association.

[39]  Atsushi Tanaka,et al.  PINK1 Is Selectively Stabilized on Impaired Mitochondria to Activate Parkin , 2010, PLoS biology.

[40]  J. Nunnari,et al.  Determinants and functions of mitochondrial behavior. , 2014, Annual review of cell and developmental biology.

[41]  M. Bhasin,et al.  PGC-1α promotes recovery after acute kidney injury during systemic inflammation in mice. , 2011, The Journal of clinical investigation.

[42]  B. Molitoris,et al.  Acute renal failure in the new millennium: time to consider combination therapy. , 2000, Seminars in nephrology.

[43]  S. Thomas Inner medullary lactate production and accumulation: a vasa recta model. , 2000, American journal of physiology. Renal physiology.

[44]  A. Hertig,et al.  Alteration of Fatty Acid Oxidation in Tubular Epithelial Cells: From Acute Kidney Injury to Renal Fibrogenesis , 2015, Front. Med..

[45]  Neil J Kelly,et al.  Glutathione Peroxidase-1 Regulates Mitochondrial Function to Modulate Redox-dependent Cellular Responses* , 2009, Journal of Biological Chemistry.

[46]  O. H. Lowry,et al.  Metabolic effects of large fructose loads in different parts of the rat nephron. , 1980, The Journal of biological chemistry.

[47]  R. Scarpulla,et al.  Metabolic control of mitochondrial biogenesis through the PGC-1 family regulatory network. , 2011, Biochimica et biophysica acta.

[48]  Quan Chen,et al.  A regulatory signaling loop comprising the PGAM5 phosphatase and CK2 controls receptor-mediated mitophagy. , 2014, Molecular cell.

[49]  N. Patel,et al.  Agonists of Peroxisome-Proliferator Activated Receptor-Gamma Reduce Renal Ischemia/Reperfusion Injury , 2003, American Journal of Nephrology.

[50]  Sonja Hess,et al.  Broad activation of the ubiquitin–proteasome system by Parkin is critical for mitophagy , 2011, Human molecular genetics.

[51]  S. Bhattacharya,et al.  OPA1, encoding a dynamin-related GTPase, is mutated in autosomal dominant optic atrophy linked to chromosome 3q28 , 2000, Nature Genetics.

[52]  Huabing Zhang,et al.  Sirtuin 3, a New Target of PGC-1α, Plays an Important Role in the Suppression of ROS and Mitochondrial Biogenesis , 2010, PloS one.

[53]  G. Filippatos,et al.  Heart failure and kidney dysfunction: epidemiology, mechanisms and management , 2016, Nature Reviews Nephrology.

[54]  Z. Varghese,et al.  PPARα agonist fenofibrate improves diabetic nephropathy in db/db mice. Commentary , 2006 .

[55]  F. Zwartkruis,et al.  Rheb and mammalian target of rapamycin in mitochondrial homoeostasis , 2013, Open Biology.

[56]  N. Chandel,et al.  Mitochondrial reactive oxygen species trigger hypoxia-induced transcription. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[57]  C. Blackstone,et al.  Dynamic regulation of mitochondrial fission through modification of the dynamin‐related protein Drp1 , 2010, Annals of the New York Academy of Sciences.

[58]  J. Weinberg,et al.  Failed Tubule Recovery, AKI-CKD Transition, and Kidney Disease Progression. , 2015, Journal of the American Society of Nephrology : JASN.

[59]  Hala A. Attia,et al.  Fenofibrate attenuates diabetic nephropathy in experimental diabetic rat's model via suppression of augmented TGF-β1/Smad3 signaling pathway , 2016, Archives of physiology and biochemistry.

[60]  G. Remuzzi,et al.  Sirtuin 3-dependent mitochondrial dynamic improvements protect against acute kidney injury. , 2015, Journal of Clinical Investigation.

[61]  L. Dworkin,et al.  The glomerulus: the sphere of influence. , 2014, Clinical journal of the American Society of Nephrology : CJASN.

[62]  B. Viollet,et al.  AMPK dysregulation promotes diabetes-related reduction of superoxide and mitochondrial function. , 2013, The Journal of clinical investigation.

[63]  J. Weinberg,et al.  Anaerobic and aerobic pathways for salvage of proximal tubules from hypoxia-induced mitochondrial injury. , 2000, American journal of physiology. Renal physiology.

[64]  N. Chandel,et al.  Reactive Oxygen Species Generated at Mitochondrial Complex III Stabilize Hypoxia-inducible Factor-1α during Hypoxia , 2000, The Journal of Biological Chemistry.

[65]  K. Elgass,et al.  Structural and functional analysis of MiD51, a dynamin receptor required for mitochondrial fission , 2014, The Journal of cell biology.

[66]  Shuang Huang,et al.  Drp1 dephosphorylation in ATP depletion-induced mitochondrial injury and tubular cell apoptosis. , 2010, American journal of physiology. Renal physiology.

[67]  Emilio Clementi,et al.  Calorie Restriction Promotes Mitochondrial Biogenesis by Inducing the Expression of eNOS , 2005, Science.

[68]  C. Scott,et al.  Misconceptions about Aerobic and Anaerobic Energy Expenditure , 2005, Journal of the International Society of Sports Nutrition.

[69]  E. Rugarli,et al.  The i-AAA protease YME1L and OMA1 cleave OPA1 to balance mitochondrial fusion and fission , 2014, The Journal of cell biology.

[70]  M. Brand,et al.  Physiological functions of the mitochondrial uncoupling proteins UCP2 and UCP3. , 2005, Cell metabolism.

[71]  M. Bhasin,et al.  PGC1α-dependent NAD biosynthesis links oxidative metabolism to renal protection , 2016, Nature.

[72]  Jianjie Ma,et al.  Autophagy, Innate Immunity and Tissue Repair in Acute Kidney Injury , 2016, International journal of molecular sciences.

[73]  P. Ray,et al.  Reactive oxygen species (ROS) homeostasis and redox regulation in cellular signaling. , 2012, Cellular signalling.

[74]  I. Fridovich,et al.  Mitochondrial superoxide simutase. Site of synthesis and intramitochondrial localization. , 1973, The Journal of biological chemistry.

[75]  R. Shaw,et al.  The AMPK signalling pathway coordinates cell growth, autophagy and metabolism , 2011, Nature Cell Biology.

[76]  U. Ungerstedt,et al.  Interstitial lactate, inosine and hypoxanthine in rat kidney during normothermic ischaemia and recirculation. , 1991, Acta physiologica Scandinavica.

[77]  Vikas Chandra,et al.  Structural overview of the nuclear receptor superfamily: insights into physiology and therapeutics. , 2010, Annual review of physiology.

[78]  L. Scorrano,et al.  (De)constructing mitochondria: what for? , 2006, Physiology.

[79]  D. Chan,et al.  OPA1 processing controls mitochondrial fusion and is regulated by mRNA splicing, membrane potential, and Yme1L , 2007, The Journal of cell biology.

[80]  R. Schnellmann,et al.  PGC-1alpha over-expression promotes recovery from mitochondrial dysfunction and cell injury. , 2007, Biochemical and biophysical research communications.

[81]  R. Schnellmann,et al.  Mitochondrial Biogenesis as a Pharmacological Target: A New Approach to Acute and Chronic Diseases. , 2016, Annual review of pharmacology and toxicology.

[82]  F. Emma,et al.  Mitochondrial dysfunction in inherited renal disease and acute kidney injury , 2016, Nature Reviews Nephrology.

[83]  D. Selewski,et al.  Acute kidney injury. , 2014, Pediatrics in review.

[84]  David Carling,et al.  AMPK, insulin resistance, and the metabolic syndrome. , 2013, The Journal of clinical investigation.

[85]  S. Waikar,et al.  Diagnosis, epidemiology and outcomes of acute kidney injury. , 2008, Clinical journal of the American Society of Nephrology : CJASN.

[86]  Daniel P. Kelly,et al.  Peroxisome Proliferator-activated Receptor Coactivator-1α (PGC-1α) Coactivates the Cardiac-enriched Nuclear Receptors Estrogen-related Receptor-α and -γ , 2002, The Journal of Biological Chemistry.

[87]  J. Gutteridge,et al.  Free radicals in disease processes: a compilation of cause and consequence. , 1993, Free radical research communications.

[88]  J Auwerx,et al.  Mechanism of action of fibrates on lipid and lipoprotein metabolism. , 1998, Circulation.

[89]  Stefan Strack,et al.  A Calcineurin Docking Motif (LXVP) in Dynamin-related Protein 1 Contributes to Mitochondrial Fragmentation and Ischemic Neuronal Injury* , 2013, The Journal of Biological Chemistry.

[90]  Steven B Heymsfield,et al.  Specific metabolic rates of major organs and tissues across adulthood: evaluation by mechanistic model of resting energy expenditure. , 2010, The American journal of clinical nutrition.

[91]  E. Pletneva,et al.  Conformational properties of cardiolipin-bound cytochrome c , 2011, Proceedings of the National Academy of Sciences.

[92]  J. Orak,et al.  Fatty acid metabolism in renal ischemia , 1988, Lipids.

[93]  M. Velarde,et al.  Mitochondrial effectors of cellular senescence: beyond the free radical theory of aging , 2014, Aging cell.

[94]  G. Prusky,et al.  Protection of mitochondria prevents high-fat diet-induced glomerulopathy and proximal tubular injury. , 2016, Kidney international.

[95]  A. Benigni,et al.  Clinical Practice : Mini-Review , 2016 .

[96]  A. Stahl,et al.  Triglyceride accumulation in injured renal tubular cells: alterations in both synthetic and catabolic pathways. , 2005, Kidney international.

[97]  A. Keech We-S15:2 Effects of long-term fenofibrate therapy on cardiovascular events among 9795 people with type 2 diabetes mellitus: The field study, a randomised controlled trial , 2006 .

[98]  M. Holechek Glomerular filtration: an overview. , 2003, Nephrology nursing journal : journal of the American Nephrology Nurses' Association.

[99]  N. Vaziri,et al.  Targeting the Transcription Factor Nrf2 to Ameliorate Oxidative Stress and Inflammation in Chronic Kidney Disease , 2012, Kidney international.

[100]  T. Finkel,et al.  Cellular mechanisms and physiological consequences of redox-dependent signalling , 2014, Nature Reviews Molecular Cell Biology.

[101]  D. Bonthron,et al.  Endogenous fructose production and fructokinase activation mediate renal injury in diabetic nephropathy. , 2014, Journal of the American Society of Nephrology : JASN.

[102]  W. Fan,et al.  PPARs and ERRs: molecular mediators of mitochondrial metabolism. , 2015, Current opinion in cell biology.

[103]  Alexander S. Banks,et al.  Sirtuin 1 and sirtuin 3: physiological modulators of metabolism. , 2012, Physiological reviews.

[104]  J. Megyesi,et al.  Formoterol restores mitochondrial and renal function after ischemia-reperfusion injury. , 2014, Journal of the American Society of Nephrology : JASN.

[105]  P. Bernardi,et al.  Dephosphorylation by calcineurin regulates translocation of Drp1 to mitochondria , 2008, Proceedings of the National Academy of Sciences.

[106]  S. Hallan,et al.  The Role of Mitochondria in Diabetic Kidney Disease , 2016, Current Diabetes Reports.

[107]  B. Ross,et al.  Glucose metabolism in renal tubular function. , 1986, Kidney international.

[108]  F. Martin,et al.  IHG-1 promotes mitochondrial biogenesis by stabilizing PGC-1α. , 2011, Journal of the American Society of Nephrology : JASN.

[109]  T. Wai,et al.  Mitochondrial Dynamics and Metabolic Regulation , 2016, Trends in Endocrinology & Metabolism.

[110]  M. You,et al.  Bnip3 Mediates the Hypoxia-induced Inhibition on Mammalian Target of Rapamycin by Interacting with Rheb* , 2007, Journal of Biological Chemistry.

[111]  C. Kruger,et al.  Albumin-bound fatty acids but not albumin itself alter redox balance in tubular epithelial cells and induce a peroxide-mediated redox-sensitive apoptosis. , 2014, American journal of physiology. Renal physiology.

[112]  Steven P. Gygi,et al.  Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization , 2013, Nature.

[113]  D. Lacombe,et al.  High glucose repatterns human podocyte energy metabolism during differentiation and diabetic nephropathy , 2016, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[114]  R. Zager,et al.  Renal cortical pyruvate depletion during AKI. , 2014, Journal of the American Society of Nephrology : JASN.

[115]  V. Mootha,et al.  Mechanisms Controlling Mitochondrial Biogenesis and Respiration through the Thermogenic Coactivator PGC-1 , 1999, Cell.

[116]  Ji Zhang,et al.  Role of BNIP3 and NIX in cell death, autophagy, and mitophagy , 2009, Cell Death and Differentiation.

[117]  D. Basile,et al.  Pathophysiology of acute kidney injury. , 2012, Comprehensive Physiology.

[118]  L. Canani,et al.  Polymorphisms of the UCP2 Gene Are Associated with Glomerular Filtration Rate in Type 2 Diabetic Patients and with Decreased UCP2 Gene Expression in Human Kidney , 2015, PloS one.

[119]  P. O’Connor RENAL OXYGEN DELIVERY: MATCHING DELIVERY TO METABOLIC DEMAND , 2006, Clinical and experimental pharmacology & physiology.

[120]  T. Soga,et al.  Autophagy protects the proximal tubule from degeneration and acute ischemic injury. , 2011, Journal of the American Society of Nephrology : JASN.

[121]  Mustafa Arici,et al.  Stimulation of proximal tubular cell apoptosis by albumin-bound fatty acids mediated by peroxisome proliferator activated receptor-gamma. , 2003, Journal of the American Society of Nephrology : JASN.

[122]  J. Mears,et al.  Conformational changes in Dnm1 support a contractile mechanism for mitochondrial fission , 2010, Nature Structural &Molecular Biology.

[123]  R. Schnellmann,et al.  Renal cortical hexokinase and pentose phosphate pathway activation through the EGFR/Akt signaling pathway in endotoxin-induced acute kidney injury. , 2014, American journal of physiology. Renal physiology.

[124]  R. Inagi,et al.  Mitochondria: a therapeutic target in acute kidney injury. , 2016, Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association.

[125]  S. Soltoff,et al.  ATP and the regulation of renal cell function. , 1986, Annual review of physiology.

[126]  F. Polleux,et al.  AMP-activated protein kinase mediates mitochondrial fission in response to energy stress , 2016, Science.

[127]  Y. Bao,et al.  Protective Role of PGC-1α in Diabetic Nephropathy Is Associated with the Inhibition of ROS through Mitochondrial Dynamic Remodeling , 2015, PloS one.

[128]  M. Priault,et al.  Rheb regulates mitophagy induced by mitochondrial energetic status. , 2013, Cell metabolism.

[129]  B. Viollet,et al.  Phosphorylation of ULK1 (hATG1) by AMP-Activated Protein Kinase Connects Energy Sensing to Mitophagy , 2011, Science.

[130]  L. Landsberg Insulin resistance and the metabolic syndrome , 2005, Diabetologia.

[131]  R. Youle,et al.  Mechanisms of mitophagy , 2010, Nature Reviews Molecular Cell Biology.

[132]  Sara Cipolat,et al.  OPA1 Controls Apoptotic Cristae Remodeling Independently from Mitochondrial Fusion , 2006, Cell.

[133]  P. Lishko,et al.  Mechanism of Fatty-Acid-Dependent UCP1 Uncoupling in Brown Fat Mitochondria , 2012, Cell.

[134]  B. Strom,et al.  Risk factors and outcome of hospital-acquired acute renal failure. Clinical epidemiologic study. , 1987, The American journal of medicine.

[135]  B. Spiegelman,et al.  AMP-activated protein kinase (AMPK) action in skeletal muscle via direct phosphorylation of PGC-1α , 2007, Proceedings of the National Academy of Sciences.

[136]  Jiandie D. Lin,et al.  An autoregulatory loop controls peroxisome proliferator-activated receptor γ coactivator 1α expression in muscle , 2003, Proceedings of the National Academy of Sciences of the United States of America.

[137]  R. Cameron,et al.  Development of Therapeutics That Induce Mitochondrial Biogenesis for the Treatment of Acute and Chronic Degenerative Diseases. , 2016, Journal of medicinal chemistry.

[138]  V. Mootha,et al.  mTOR controls mitochondrial oxidative function through a YY1–PGC-1α transcriptional complex , 2007, Nature.

[139]  C. Blackstone,et al.  Cyclic AMP-dependent Protein Kinase Phosphorylation of Drp1 Regulates Its GTPase Activity and Mitochondrial Morphology* , 2007, Journal of Biological Chemistry.

[140]  N. Chandel,et al.  Mitochondrial complex III regulates hypoxic activation of HIF , 2008, Cell Death and Differentiation.

[141]  L. Forni,et al.  Acute kidney injury: short-term and long-term effects , 2016, Critical Care.

[142]  Rodrigue Rossignol,et al.  Energy Substrate Modulates Mitochondrial Structure and Oxidative Capacity in Cancer Cells , 2004, Cancer Research.

[143]  V. Lushchak,et al.  Glutathione Homeostasis and Functions: Potential Targets for Medical Interventions , 2012, Journal of amino acids.

[144]  M. Sandri,et al.  Mitochondrial Quality Control and Muscle Mass Maintenance , 2016, Front. Physiol..

[145]  Daniel P. Kelly,et al.  PGC-1α Coactivates the Cardiac-enriched Nuclear Receptors ERRα and γ via Novel Leucine-rich Interaction Interfaces , 2002 .

[146]  J. Villena New insights into PGC‐1 coactivators: redefining their role in the regulation of mitochondrial function and beyond , 2015, The FEBS journal.

[147]  K. Zen,et al.  UCP2 attenuates apoptosis of tubular epithelial cells in renal ischemia-reperfusion injury. , 2017, American journal of physiology. Renal physiology.

[148]  A. J. Lambert,et al.  Mitochondrial superoxide: production, biological effects, and activation of uncoupling proteins. , 2004, Free radical biology & medicine.

[149]  M. Hall,et al.  mTORC1 maintains renal tubular homeostasis and is essential in response to ischemic stress , 2014, Proceedings of the National Academy of Sciences.

[150]  D. Chan Fusion and fission: interlinked processes critical for mitochondrial health. , 2012, Annual review of genetics.

[151]  J. McMurray,et al.  Bardoxolone methyl in type 2 diabetes and stage 4 chronic kidney disease. , 2013, The New England journal of medicine.

[152]  J. Bonventre,et al.  Acute renal failure. , 2018, The New England journal of medicine.

[153]  David S. Park,et al.  Mitochondrial processing peptidase regulates PINK1 processing, import and Parkin recruitment , 2012, EMBO reports.

[154]  N. Rogers,et al.  Roles of mTOR complexes in the kidney: implications for renal disease and transplantation , 2016, Nature Reviews Nephrology.

[155]  Nektarios Tavernarakis,et al.  Functional and physical interaction between Bcl‐XL and a BH3‐like domain in Beclin‐1 , 2007, The EMBO journal.

[156]  E. Lonn Vitamin E Supplementation, Cardiovascular Events, and Cancer—Reply , 2005 .

[157]  T. Horino,et al.  Sestrin-2 and BNIP3 regulate autophagy and mitophagy in renal tubular cells in acute kidney injury. , 2013, American journal of physiology. Renal physiology.

[158]  G. Dorn,et al.  Mitoconfusion: noncanonical functioning of dynamism factors in static mitochondria of the heart. , 2015, Cell metabolism.

[159]  D. Portilla,et al.  Role of fatty acid beta-oxidation and calcium-independent phospholipase A2 in ischemic acute renal failure. , 1999, Current opinion in nephrology and hypertension.

[160]  Chi-yuan Hsu,et al.  Cardiovascular events after AKI: a new dimension. , 2014, Journal of the American Society of Nephrology : JASN.

[161]  Sheng-Cai Lin,et al.  AMPK Promotes Autophagy by Facilitating Mitochondrial Fission. , 2016, Cell metabolism.

[162]  O. Shirihai,et al.  Mitochondrial dynamics in the regulation of nutrient utilization and energy expenditure. , 2013, Cell metabolism.

[163]  R. Schnellmann,et al.  Suppressed mitochondrial biogenesis in folic acid-induced acute kidney injury and early fibrosis. , 2014, Toxicology letters.

[164]  N. Sundaresan,et al.  Exogenous NAD Blocks Cardiac Hypertrophic Response via Activation of the SIRT3-LKB1-AMP-activated Kinase Pathway* , 2009, The Journal of Biological Chemistry.

[165]  M. Cooper,et al.  Mapping time-course mitochondrial adaptations in the kidney in experimental diabetes. , 2016, Clinical science.

[166]  Shiwei Song,et al.  A role for the mitochondrial deacetylase Sirt3 in regulating energy homeostasis , 2008, Proceedings of the National Academy of Sciences.

[167]  I. A. Bobulescu Renal lipid metabolism and lipotoxicity , 2010, Current opinion in nephrology and hypertension.

[168]  Ferdinando Giacco,et al.  Oxidative stress and diabetic complications. , 2010, Circulation research.

[169]  D. Hardie AMP-activated protein kinase: an energy sensor that regulates all aspects of cell function. , 2011, Genes & development.

[170]  Prashant Mishra,et al.  Metabolic regulation of mitochondrial dynamics , 2016, The Journal of cell biology.

[171]  B. Lu Mitochondrial dynamics and neurodegeneration , 2009, Current neurology and neuroscience reports.

[172]  Q. Tong,et al.  Diet and exercise signals regulate SIRT3 and activate AMPK and PGC-1α in skeletal muscle , 2009, Aging.

[173]  E. Clementi,et al.  Mitochondrial biogenesis by NO yields functionally active mitochondria in mammals. , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[174]  D. Ferguson,et al.  Bardoxolone methyl (BARD) ameliorates ischemic AKI and increases expression of protective genes Nrf2, PPARγ, and HO-1. , 2011, American journal of physiology. Renal physiology.

[175]  Akinori Eiyama,et al.  PINK1/Parkin-mediated mitophagy in mammalian cells. , 2015, Current opinion in cell biology.

[176]  M. Otagiri,et al.  CD36 is one of important receptors promoting renal tubular injury by advanced oxidation protein products. , 2008, American journal of physiology. Renal physiology.

[177]  F. Lang,et al.  mTORC2 regulates renal tubule sodium uptake by promoting ENaC activity. , 2015, The Journal of clinical investigation.

[178]  Ivan Dikic,et al.  Nix is a selective autophagy receptor for mitochondrial clearance , 2010, EMBO reports.

[179]  S. Carr,et al.  A Mitochondrial Protein Compendium Elucidates Complex I Disease Biology , 2008, Cell.

[180]  R. Zager,et al.  Renal tubular triglyercide accumulation following endotoxic, toxic, and ischemic injury. , 2005, Kidney international.

[181]  William J. Israelsen,et al.  Pyruvate kinase M2 activation may protect against the progression of diabetic glomerular pathology and mitochondrial dysfunction , 2017, Nature Medicine.

[182]  Yaeni Kim,et al.  Adenosine monophosphate–activated protein kinase in diabetic nephropathy , 2016, Kidney research and clinical practice.

[183]  H. Bayır,et al.  Cardiolipin switch in mitochondria: shutting off the reduction of cytochrome c and turning on the peroxidase activity. , 2007, Biochemistry.

[184]  A. Sugawara,et al.  Protective effect of peroxisome proliferator activated receptor gamma agonists on diabetic and non‐diabetic renal diseases , 2005, Nephrology.

[185]  Santiago Costantino,et al.  The mitochondrial transcription factor TFAM coordinates the assembly of multiple DNA molecules into nucleoid-like structures. , 2007, Molecular biology of the cell.

[186]  H. McBride,et al.  The intracellular redox state is a core determinant of mitochondrial fusion , 2012, EMBO reports.

[187]  Kirsten L. Johansen,et al.  US Renal Data System 2011 Annual Data Report , 2012 .

[188]  Young-sil Yoon,et al.  Formation of elongated giant mitochondria in DFO‐induced cellular senescence: Involvement of enhanced fusion process through modulation of Fis1 , 2006, Journal of cellular physiology.

[189]  K. Sharma,et al.  Challenging the dogma of mitochondrial reactive oxygen species overproduction in diabetic kidney disease. , 2016, Kidney international.

[190]  Yunchao Su,et al.  Autophagy in proximal tubules protects against acute kidney injury , 2012, Kidney international.

[191]  D. Mikhailidis,et al.  Contrast-Induced Acute Kidney Injury in Patients Undergoing Carotid Artery Stenting: An Underestimated Issue , 2017, Angiology.

[192]  R. Youle,et al.  Self and nonself: how autophagy targets mitochondria and bacteria. , 2014, Cell host & microbe.

[193]  C. Dieterich,et al.  Mitofusin 2 is required to maintain mitochondrial coenzyme Q levels , 2015, The Journal of cell biology.

[194]  J. Levijoki,et al.  AMPK activator AICAR ameliorates ischaemia reperfusion injury in the rat kidney , 2012, British journal of pharmacology.

[195]  W. Guder,et al.  Renal substrate metabolism. , 1986, Physiological reviews.

[196]  G. Semenza Oxygen-dependent regulation of mitochondrial respiration by hypoxia-inducible factor 1. , 2007, The Biochemical journal.

[197]  M. Coughlan,et al.  Mitochondrial dysfunction and mitophagy: the beginning and end to diabetic nephropathy? , 2014, British journal of pharmacology.

[198]  O. Kretz,et al.  Autophagy plays a critical role in kidney tubule maintenance, aging and ischemia-reperfusion injury , 2012, Autophagy.

[199]  Z. Dong,et al.  Bax and Bak have critical roles in ischemic acute kidney injury in global and proximal tubule-specific knockout mouse models , 2013, Kidney international.

[200]  N. Levin,et al.  Renal energy metabolism and sodium reabsorption. , 1973, Annual review of medicine.

[201]  K. Utsunomiya,et al.  Dyslipidemia in diabetic nephropathy , 2016, Renal Replacement Therapy.

[202]  Å. Gustafsson,et al.  Bnip3-mediated defects in oxidative phosphorylation promote mitophagy , 2011, Autophagy.

[203]  H. Waterham,et al.  A lethal defect of mitochondrial and peroxisomal fission. , 2007, The New England journal of medicine.

[204]  A. Miranda-Díaz,et al.  Oxidative Stress in Diabetic Nephropathy with Early Chronic Kidney Disease , 2016, Journal of diabetes research.

[205]  F. Martin,et al.  IHG-1 Increases Mitochondrial Fusion and Bioenergetic Function , 2014, Diabetes.

[206]  S. Rikka,et al.  Microtubule-associated Protein 1 Light Chain 3 (LC3) Interacts with Bnip3 Protein to Selectively Remove Endoplasmic Reticulum and Mitochondria via Autophagy* , 2012, The Journal of Biological Chemistry.

[207]  Katalin Susztak,et al.  The Evolving Understanding of the Contribution of Lipid Metabolism to Diabetic Kidney Disease , 2015, Current Diabetes Reports.

[208]  J. Auwerx,et al.  Regulation of PGC-1α, a nodal regulator of mitochondrial biogenesis. , 2011, The American journal of clinical nutrition.

[209]  Lin Sun,et al.  Mitochondrial dynamics: regulatory mechanisms and emerging role in renal pathophysiology , 2012, Kidney international.

[210]  Prashant Mishra,et al.  Proteolytic cleavage of Opa1 stimulates mitochondrial inner membrane fusion and couples fusion to oxidative phosphorylation. , 2014, Cell metabolism.

[211]  Lin Sun,et al.  Renoprotective approaches and strategies in acute kidney injury. , 2016, Pharmacology & therapeutics.

[212]  D. Bonthron,et al.  Ketohexokinase: Expression and Localization of the Principal Fructose-metabolizing Enzyme , 2009, The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society.

[213]  Yaeni Kim,et al.  Fenofibrate Improves Renal Lipotoxicity through Activation of AMPK-PGC-1α in db/db Mice , 2014, PloS one.

[214]  R. Schnellmann,et al.  cGMP-Selective Phosphodiesterase Inhibitors Stimulate Mitochondrial Biogenesis and Promote Recovery from Acute Kidney Injury , 2013, The Journal of Pharmacology and Experimental Therapeutics.

[215]  T. Lagache,et al.  Nucleoside diphosphate kinases fuel dynamin superfamily proteins with GTP for membrane remodeling , 2014, Science.

[216]  J. Forbes Mitochondria–Power Players in Kidney Function? , 2016, Trends in Endocrinology & Metabolism.

[217]  Songming Huang,et al.  Mitochondrial dysfunction in the pathophysiology of renal diseases. , 2014, American journal of physiology. Renal physiology.

[218]  E. Gulve,et al.  Acute and chronic treatment of ob/ob and db/db mice with AICAR decreases blood glucose concentrations. , 2002, Biochemical and biophysical research communications.

[219]  Tomotake Kanki Nix: A receptor protein for mitophagy in mammals , 2010, Autophagy.

[220]  H. Lodish Molecular Cell Biology , 1986 .

[221]  G. Semenza Targeting HIF-1 for cancer therapy , 2003, Nature Reviews Cancer.

[222]  S. Parikh Therapeutic targeting of the mitochondrial dysfunction in septic acute kidney injury , 2013, Current opinion in critical care.

[223]  Ted M. Dawson,et al.  PINK1-dependent recruitment of Parkin to mitochondria in mitophagy , 2009, Proceedings of the National Academy of Sciences.

[224]  Nektarios Tavernarakis,et al.  Mitochondrial homeostasis: The interplay between mitophagy and mitochondrial biogenesis , 2014, Experimental Gerontology.

[225]  J. Lemasters Selective mitochondrial autophagy, or mitophagy, as a targeted defense against oxidative stress, mitochondrial dysfunction, and aging. , 2005, Rejuvenation research.

[226]  A. Cederbaum,et al.  Mitochondrial Catalase and Oxidative Injury , 2001, Neurosignals.

[227]  F. Artunc,et al.  mTORC2 critically regulates renal potassium handling. , 2016, The Journal of clinical investigation.

[228]  M. Brownlee Biochemistry and molecular cell biology of diabetic complications , 2001, Nature.

[229]  R. Schnellmann,et al.  Persistent disruption of mitochondrial homeostasis after acute kidney injury. , 2012, American journal of physiology. Renal physiology.

[230]  W. Guder,et al.  Enzyme distribution along the nephron. , 1984, Kidney international.