Fat segmentation on chest CT images via fuzzy models

Quantification of fat throughout the body is vital for the study of many diseases. In the thorax, it is important for lung transplant candidates since obesity and being underweight are contraindications to lung transplantation given their associations with increased mortality. Common approaches for thoracic fat segmentation are all interactive in nature, requiring significant manual effort to draw the interfaces between fat and muscle with low efficiency and questionable repeatability. The goal of this paper is to explore a practical way for the segmentation of subcutaneous adipose tissue (SAT) and visceral adipose tissue (VAT) components of chest fat based on a recently developed body-wide automatic anatomy recognition (AAR) methodology. The AAR approach involves 3 main steps: building a fuzzy anatomy model of the body region involving all its major representative objects, recognizing objects in any given test image, and delineating the objects. We made several modifications to these steps to develop an effective solution to delineate SAT/VAT components of fat. Two new objects representing interfaces of SAT and VAT regions with other tissues, SatIn and VatIn are defined, rather than using directly the SAT and VAT components as objects for constructing the models. A hierarchical arrangement of these new and other reference objects is built to facilitate their recognition in the hierarchical order. Subsequently, accurate delineations of the SAT/VAT components are derived from these objects. Unenhanced CT images from 40 lung transplant candidates were utilized in experimentally evaluating this new strategy. Mean object location error achieved was about 2 voxels and delineation error in terms of false positive and false negative volume fractions were, respectively, 0.07 and 0.1 for SAT and 0.04 and 0.2 for VAT.

[1]  C. Pichard,et al.  Four-year follow-up of body compostion in lung transplant patients , 2003, Transplantation.

[2]  Pablo Irarrazaval,et al.  Adipose tissue MRI for quantitative measurement of central obesity , 2013, Journal of magnetic resonance imaging : JMRI.

[3]  Rupal J Shah,et al.  Body composition and mortality after adult lung transplantation in the United States. , 2014, American journal of respiratory and critical care medicine.

[4]  B. Zerahn,et al.  Contemporary methods of body composition measurement , 2015, Clinical physiology and functional imaging.

[5]  Udo Hoffmann,et al.  Body fat distribution, incident cardiovascular disease, cancer, and all-cause mortality. , 2013, Journal of the American College of Cardiology.

[6]  Jayaram K. Udupa,et al.  Abdominal adiposity quantification at MRI via fuzzy model-based anatomy recognition , 2013, Medical Imaging.

[7]  Dewey Odhner,et al.  Automatic anatomy recognition in whole-body PET/CT images. , 2016, Medical physics.

[8]  B. Kardavani,et al.  Fat and bone marrow embolization in a donor as the cause of death in a lung recipient. , 2009, Transplantation proceedings.

[9]  Jayaram K. Udupa,et al.  Body-wide hierarchical fuzzy modeling, recognition, and delineation of anatomy in medical images , 2014, Medical Image Anal..

[10]  L. Seabolt,et al.  Imaging methods for analyzing body composition in human obesity and cardiometabolic disease , 2015, Annals of the New York Academy of Sciences.

[11]  Ioannis A. Kakadiaris,et al.  Automated Pericardial Fat Quantification in CT Data , 2006, 2006 International Conference of the IEEE Engineering in Medicine and Biology Society.

[12]  R. Burger,et al.  American Society of Clinical Oncology position statement on obesity and cancer. , 2014, Journal of clinical oncology : official journal of the American Society of Clinical Oncology.

[13]  Damini Dey,et al.  Interscan reproducibility of computer-aided epicardial and thoracic fat measurement from noncontrast cardiac CT. , 2011, Journal of cardiovascular computed tomography.

[14]  Ioannis Kyrou,et al.  Clinical Problems Caused by Obesity , 2014 .

[15]  Nuno Bettencourt,et al.  Towards automatic quantification of the epicardial fat in non-contrasted CT images , 2011, Computer methods in biomechanics and biomedical engineering.