Functional β-propeller lectins by tandem duplications of repetitive units.
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[1] R. Trumbly,et al. Mutations of the WD repeats that compromise Tup1 repression function maintain structural integrity of the WD domain trypsin-resistant core. , 2002, Archives of biochemistry and biophysics.
[2] N. Oppenheimer,et al. Structure and mechanism , 1989 .
[3] Tanmay A M Bharat,et al. A βα-barrel built by the combination of fragments from different folds , 2008, Proceedings of the National Academy of Sciences.
[4] E. Bornberg-Bauer,et al. Evolution of circular permutations in multidomain proteins. , 2006, Molecular biology and evolution.
[5] D. W. Bolen,et al. Unfolding free energy changes determined by the linear extrapolation method. 1. Unfolding of phenylmethanesulfonyl alpha-chymotrypsin using different denaturants. , 1988, Biochemistry.
[6] Andreas Plückthun,et al. Folding and unfolding mechanism of highly stable full-consensus ankyrin repeat proteins. , 2008, Journal of molecular biology.
[7] Andreas Plückthun,et al. Designing repeat proteins: modular leucine-rich repeat protein libraries based on the mammalian ribonuclease inhibitor family. , 2003, Journal of molecular biology.
[8] K. H. Kalk,et al. Structure of quinoprotein methylamine dehydrogenase at 2.25 A resolution. , 1989, The EMBO journal.
[9] A. R. Fresht. Structure and Mechanism in Protein Science: A Guide to Enzyme Catalysis and Protein Folding , 1999 .
[10] C. Ponting,et al. Protein repeats: structures, functions, and evolution. , 2001, Journal of structural biology.
[11] Sophie E Jackson,et al. Local and long-range stability in tandemly arrayed tetratricopeptide repeats. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[12] G. D'alessio,et al. Evolution of oligomeric proteins. The unusual case of a dimeric ribonuclease. , 1999, European journal of biochemistry.
[13] M. Paoli,et al. Engineering of beta-propeller protein scaffolds by multiple gene duplication and fusion of an idealized WD repeat. , 2006, Biomolecular engineering.
[14] Massimo Paoli,et al. Novel sequences propel familiar folds. , 2002, Structure.
[15] C. Glover,et al. Gene expression profiling for hematopoietic cell culture , 2006 .
[16] Sophie E Jackson,et al. The folding and design of repeat proteins: reaching a consensus. , 2003, Current opinion in structural biology.
[17] Eduardo P. C. Rocha,et al. Alternative to homo-oligomerisation: the creation of local symmetry in proteins by internal amplification. , 2009, Journal of molecular biology.
[18] Lutz Riechmann,et al. A segment of cold shock protein directs the folding of a combinatorial protein. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[19] S. Teichmann,et al. The importance of sequence diversity in the aggregation and evolution of proteins , 2005, Nature.
[20] Johannes Söding,et al. Evolution of the β‐propeller fold , 2008, Proteins.
[21] Dan S. Tawfik,et al. Metamorphic proteins mediate evolutionary transitions of structure , 2010, Proceedings of the National Academy of Sciences.
[22] N. Grishin. Fold change in evolution of protein structures. , 2001, Journal of structural biology.
[23] Michaela Wimmerová,et al. The Fucose-binding Lectin from Ralstonia solanacearum , 2005, Journal of Biological Chemistry.
[24] L. Patthy. Genome evolution and the evolution of exon-shuffling--a review. , 1999, Gene.
[25] S. Koide. Generation of new protein functions by nonhomologous combinations and rearrangements of domains and modules. , 2009, Current opinion in biotechnology.
[26] A. Plückthun,et al. Selection and characterization of DARPins specific for the neurotensin receptor 1. , 2009, Protein engineering, design & selection : PEDS.
[27] Andreas Plückthun,et al. Designed armadillo repeat proteins as general peptide-binding scaffolds: consensus design and computational optimization of the hydrophobic core. , 2008, Journal of molecular biology.
[28] David T. Jones,et al. β Propellers: structural rigidity and functional diversity , 1999 .
[29] D. D. Jones,et al. Linking the functions of unrelated proteins using a novel directed evolution domain insertion method , 2008, Nucleic acids research.
[30] F. Young. Biochemistry , 1955, The Indian Medical Gazette.
[31] R. Rosenfeld. Nature , 2009, Otolaryngology--head and neck surgery : official journal of American Academy of Otolaryngology-Head and Neck Surgery.
[32] Dan Graur,et al. Fundamentals of Molecular Evolution, 2nd Edition , 2000 .
[33] R. Huber,et al. Tachylectin‐2: crystal structure of a specific GlcNAc/GalNAc‐binding lectin involved in the innate immunity host defense of the Japanese horseshoe crab Tachypleus tridentatus , 1999, The EMBO journal.
[34] S. Kawabata,et al. Purification, Characterization, and cDNA Cloning of a 27-kDa Lectin (L10) from Horseshoe Crab Hemocytes (*) , 1995, The Journal of Biological Chemistry.
[35] Shohei Koide,et al. Design of protein function leaps by directed domain interface evolution , 2008, Proceedings of the National Academy of Sciences.
[36] T Gojobori,et al. Codon usage tabulated from the GenBank Genetic Sequence Data. , 1988, Nucleic acids research.
[37] Dan S. Tawfik,et al. Reconstruction of functional beta-propeller lectins via homo-oligomeric assembly of shorter fragments. , 2007, Journal of molecular biology.
[38] N. Greenfield. Using circular dichroism collected as a function of temperature to determine the thermodynamics of protein unfolding and binding interactions , 2006, Nature Protocols.
[39] A. Murzin. Structural principles for the propeller assembly of β‐sheets: The preference for seven‐fold symmetry , 1992, Proteins.
[40] R. Merkl,et al. Computational and experimental evidence for the evolution of a (beta alpha)8-barrel protein from an ancestral quarter-barrel stabilised by disulfide bonds. , 2010, Journal of molecular biology.
[41] Tommi Kajander,et al. Consensus design as a tool for engineering repeat proteins. , 2006, Methods in molecular biology.
[42] Wen-Hsiung Li,et al. Fundamentals of molecular evolution , 1990 .
[43] C. Vogel,et al. Duplication, divergence and formation of novel protein topologies. , 2006, BioEssays : news and reviews in molecular, cellular and developmental biology.
[44] Andrei N. Lupas,et al. Gene Duplication of the Eight-stranded β-Barrel OmpX Produces a Functional Pore: A Scenario for the Evolution of Transmembrane β-Barrels , 2007 .
[45] S. Sidhu,et al. Phage display for selection of novel binding peptides. , 2000, Methods in enzymology.
[46] Andreas Plückthun,et al. Designing repeat proteins: well-expressed, soluble and stable proteins from combinatorial libraries of consensus ankyrin repeat proteins. , 2003, Journal of molecular biology.
[47] Temple F. Smith,et al. G Protein Heterodimers: New Structures Propel New Questions , 1996, Cell.
[48] B. Höcker,et al. Establishing wild-type levels of catalytic activity on natural and artificial (βα)8-barrel protein scaffolds , 2009, Proceedings of the National Academy of Sciences.
[49] Robert A. Copeland,et al. Enzymes: A Practical Introduction to Structure, Mechanism, and Data Analysis , 1996 .
[50] Dan S. Tawfik,et al. Evolution of new protein topologies through multistep gene rearrangements , 2006, Nature Genetics.
[51] D. Mindell. Fundamentals of molecular evolution , 1991 .