DESHARKY: automatic design of metabolic pathways for optimal cell growth
暂无分享,去创建一个
Alfonso Jaramillo | Guillermo Rodrigo | Javier Carrera | Kristala Jones Prather | J. Carrera | G. Rodrigo | A. Jaramillo | K. Prather
[1] J. Bailey,et al. Toward a science of metabolic engineering , 1991, Science.
[2] M. Mavrovouniotis. Estimation of standard Gibbs energy changes of biotransformations. , 1991, The Journal of biological chemistry.
[3] Masanori Arita. The metabolic world of Escherichia coli is not small. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[4] V. de Lorenzo,et al. Metabolic engineering of bacteria for environmental applications: construction of Pseudomonas strains for biodegradation of 2-chlorotoluene. , 2001, Journal of biotechnology.
[5] Alexander Schrijver,et al. Theory of linear and integer programming , 1986, Wiley-Interscience series in discrete mathematics and optimization.
[6] Timothy S. Ham,et al. Production of the antimalarial drug precursor artemisinic acid in engineered yeast , 2006, Nature.
[7] J. Keasling,et al. Low-copy plasmids can perform as well as or better than high-copy plasmids for metabolic engineering of bacteria. , 2000, Metabolic engineering.
[8] U. Sauer,et al. Systematic evaluation of objective functions for predicting intracellular fluxes in Escherichia coli , 2007, Molecular systems biology.
[9] Linda J. Broadbelt,et al. Computational discovery of biochemical routes to specialty chemicals , 2004 .
[10] Lynda B. M. Ellis,et al. Microbial Pathway Prediction: A Functional Group Approach , 2003, J. Chem. Inf. Comput. Sci..
[11] M. Elowitz,et al. Reconstruction of genetic circuits , 2005, Nature.
[12] J. Keasling,et al. Engineering a mevalonate pathway in Escherichia coli for production of terpenoids , 2003, Nature Biotechnology.
[13] F. Zimmermann,et al. Overproduction of glycolytic enzymes in yeast , 1989, Yeast.
[14] Masanori Arita. In silico atomic tracing by substrate-product relationships in Escherichia coli intermediary metabolism. , 2003, Genome research.
[15] S. Wodak,et al. Inferring meaningful pathways in weighted metabolic networks. , 2006, Journal of molecular biology.
[16] Chunhui Li,et al. Exploring the diversity of complex metabolic networks , 2005, Bioinform..
[17] L. Wackett. An annotated selection of World Wide Web sites relevant to the topics in Microbial Biotechnology , 2013, Microbial biotechnology.
[18] F. Neidhart. Escherichia coli and Salmonella. , 1996 .
[19] H. Bremer. Modulation of Chemical Composition and Other Parameters of the Cell by Growth Rate , 1999 .
[20] Alfonso Valencia,et al. MetaRouter: bioinformatics for bioremediation , 2004, Nucleic Acids Res..
[21] David Eppstein,et al. Finding the k shortest paths , 1994, Proceedings 35th Annual Symposium on Foundations of Computer Science.
[22] Eric A. Althoff,et al. Kemp elimination catalysts by computational enzyme design , 2008, Nature.
[23] 中尾 光輝,et al. KEGG(Kyoto Encyclopedia of Genes and Genomes)〔和文〕 (特集 ゲノム医学の現在と未来--基礎と臨床) -- (データベース) , 2000 .
[24] B. Palsson,et al. Metabolic Flux Balancing: Basic Concepts, Scientific and Practical Use , 1994, Bio/Technology.