Genome-wide analysis and expression profiling of DNA-binding with one zinc finger (Dof) transcription factor family in potato.
暂无分享,去创建一个
[1] A. Xiong,et al. Genome-wide analysis of Dof family transcription factors and their responses to abiotic stresses in Chinese cabbage , 2015, BMC Genomics.
[2] N. Sasaki,et al. Transient expression of tobacco BBF1-related Dof proteins, BBF2 and BBF3, upregulates genes involved in virus resistance and pathogen defense , 2015 .
[3] Comparative Analysis of Dof Transcription Factor Family in Maize , 2015, Plant Molecular Biology Reporter.
[4] N. Malviya,et al. Insights into structural and functional diversity of Dof (DNA binding with one finger) transcription factor , 2015, Planta.
[5] B. Sarangi,et al. Genome wide in silico characterization of Dof gene families of pigeonpea (Cajanus cajan (L) Millsp.) , 2014, Molecular Biology Reports.
[6] S. W. Park,et al. Molecular evolution and functional divergence of X-intrinsic protein genes in plants , 2014, Molecular Genetics and Genomics.
[7] Davide Capauto,et al. Independent and interactive effects of DOF affecting germination 1 (DAG1) and the Della proteins GA insensitive (GAI) and Repressor of ga1-3 (RGA) in embryo development and seed germination , 2014, BMC Plant Biology.
[8] J. Medina,et al. Characterization of tomato Cycling Dof Factors reveals conserved and new functions in the control of flowering time and abiotic stress responses. , 2014, Journal of experimental botany.
[9] B. Sarangi,et al. Genome Wide In Silico Characterization of Dof Transcription Factor Gene Family of Sugarcane and Its Comparative Phylogenetic Analysis with Arabidopsis, Rice and Sorghum , 2014, Sugar Tech.
[10] Koichiro Tamura,et al. MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. , 2013, Molecular biology and evolution.
[11] Richard D. Thompson,et al. The role of the DNA-binding One Zinc Finger (DOF) transcription factor family in plants. , 2013, Plant science : an international journal of experimental plant biology.
[12] Z. Ye,et al. Genome-wide analysis of plant-specific Dof transcription factor family in tomato. , 2013, Journal of integrative plant biology.
[13] K. Nishitani,et al. A Dof Transcription Factor, SCAP1, Is Essential for the Development of Functional Stomata in Arabidopsis , 2013, Current Biology.
[14] Richard G. F. Visser,et al. Naturally occurring allele diversity allows potato cultivation in northern latitudes , 2013, Nature.
[15] Jorng-Tzong Horng,et al. EuLoc: a web-server for accurately predict protein subcellular localization in eukaryotes by incorporating various features of sequence segments into the general form of Chou’s PseAAC , 2013, Journal of Computer-Aided Molecular Design.
[16] Alan Bridge,et al. New and continuing developments at PROSITE , 2012, Nucleic Acids Res..
[17] P. Carbonero,et al. The family of DOF transcription factors in Brachypodium distachyon: phylogenetic comparison with rice and barley DOFs and expression profiling , 2012, BMC Plant Biology.
[18] Andrew J. Millar,et al. FKF1 Conveys Timing Information for CONSTANS Stabilization in Photoperiodic Flowering , 2012, Science.
[19] M. S. Fernandes,et al. OsDof25 expression alters carbon and nitrogen metabolism in Arabidopsis under high N-supply , 2012, Plant Biotechnology Reports.
[20] Mingfeng Yang,et al. A putative flowering-time-related Dof transcription factor gene, JcDof3, is controlled by the circadian clock in Jatropha curcas. , 2011, Plant science : an international journal of experimental plant biology.
[21] S. Yanagisawa,et al. Introduction of the ZmDof1 gene into rice enhances carbon and nitrogen assimilation under low-nitrogen conditions. , 2011, Plant biotechnology journal.
[22] V. Singh,et al. Genome wide identification of Dof transcription factor gene family in sorghum and its comparative phylogenetic analysis with rice and Arabidopsis , 2011, Molecular Biology Reports.
[23] Sang-Bong Choi,et al. The DOF transcription factor Dof5.1 influences leaf axial patterning by promoting Revoluta transcription in Arabidopsis. , 2010, The Plant journal : for cell and molecular biology.
[24] Jason Gardiner,et al. Expression of DOF genes identifies early stages of vascular development in Arabidopsis leaves. , 2010, The International journal of developmental biology.
[25] F. Tan,et al. Overexpression of AtDOF4.7, an Arabidopsis DOF Family Transcription Factor, Induces Floral Organ Abscission Deficiency in Arabidopsis1[C][W] , 2010, Plant Physiology.
[26] B. Mueller‐Roeber,et al. A novel bipartite nuclear localization signal with an atypically long linker in DOF transcription factors. , 2010, Journal of plant physiology.
[27] Yong Guo,et al. Dof5.6/HCA2, a Dof Transcription Factor Gene, Regulates Interfascicular Cambium Formation and Vascular Tissue Development in Arabidopsis[W][OA] , 2009, The Plant Cell Online.
[28] G. Coupland,et al. Arabidopsis DOF transcription factors act redundantly to reduce CONSTANS expression and are essential for a photoperiodic flowering response. , 2009, Developmental cell.
[29] M. Tahara,et al. Altered carbohydrate metabolism in the storage roots of sweetpotato plants overexpressing the SRF1 gene, which encodes a Dof zinc finger transcription factor , 2009, Planta.
[30] Mikael Bodén,et al. MEME Suite: tools for motif discovery and searching , 2009, Nucleic Acids Res..
[31] M. Takano,et al. Circadian clock- and phytochrome-regulated Dof-like gene, Rdd1, is associated with grain size in rice. , 2009, Plant, cell & environment.
[32] Geoffrey J. Barton,et al. Jalview Version 2—a multiple sequence alignment editor and analysis workbench , 2009, Bioinform..
[33] E. Birney,et al. Pfam: the protein families database , 2013, Nucleic Acids Res..
[34] M. Zanor,et al. The DOF transcription factor OBP1 is involved in cell cycle regulation in Arabidopsis thaliana. , 2008, The Plant journal : for cell and molecular biology.
[35] C. Ávila,et al. Differential regulation of two glutamine synthetase genes by a single Dof transcription factor. , 2008, The Plant journal : for cell and molecular biology.
[36] Xiaolu Zou,et al. Interactions of Two Transcriptional Repressors and Two Transcriptional Activators in Modulating Gibberellin Signaling in Aleurone Cells1[W][OA] , 2008, Plant Physiology.
[37] Rodrigo Lopez,et al. Clustal W and Clustal X version 2.0 , 2007, Bioinform..
[38] S. Chen,et al. The soybean Dof-type transcription factor genes, GmDof4 and GmDof11, enhance lipid content in the seeds of transgenic Arabidopsis plants. , 2007, The Plant journal : for cell and molecular biology.
[39] Mineko Konishi,et al. Sequential activation of two Dof transcription factor gene promoters during vascular development in Arabidopsis thaliana. , 2007, Plant physiology and biochemistry : PPB.
[40] M. Zanor,et al. Transcription factor AtDOF4;2 affects phenylpropanoid metabolism in Arabidopsis thaliana. , 2007, The New phytologist.
[41] M. A. Moreno-Risueno,et al. The HvDOF19 transcription factor mediates the abscisic acid-dependent repression of hydrolase genes in germinating barley aleurone. , 2007, The Plant journal : for cell and molecular biology.
[42] D. Penny,et al. Patterns of intron loss and gain in plants: intron loss-dominated evolution and genome-wide comparison of O. sativa and A. thaliana. , 2006, Molecular biology and evolution.
[43] S. Yanagisawa,et al. Evolutionary processes during the formation of the plant-specific Dof transcription factor family. , 2007, Plant & cell physiology.
[44] M. A. Moreno-Risueno,et al. The family of DOF transcription factors: from green unicellular algae to vascular plants , 2007, Molecular Genetics and Genomics.
[45] Z. Ni,et al. Wheat Dof transcription factor WPBF interacts with TaQM and activates transcription of an alpha-gliadin gene during wheat seed development , 2006, Plant Molecular Biology.
[46] Gerald A. Tuskan,et al. Divergence of the Dof Gene Families in Poplar, Arabidopsis, and Rice Suggests Multiple Modes of Gene Evolution after Duplication1[W] , 2006, Plant Physiology.
[47] Miroslav Strnad,et al. DOF transcription factor AtDof1.1 (OBP2) is part of a regulatory network controlling glucosinolate biosynthesis in Arabidopsis. , 2006, The Plant journal : for cell and molecular biology.
[48] Y. Onodera,et al. Synergism between RPBF Dof and RISBZ1 bZIP Activators in the Regulation of Rice Seed Expression Genes1[W] , 2006, Plant Physiology.
[49] I. Rubio-Somoza,et al. The DOF protein, SAD, interacts with GAMYB in plant nuclei and activates transcription of endosperm-specific genes during barley seed development. , 2005, The Plant journal : for cell and molecular biology.
[50] John Quackenbush,et al. Global Transcription Profiling Reveals Comprehensive Insights into Hypoxic Response in Arabidopsis1[w] , 2005, Plant Physiology.
[51] S. Yanagisawa,et al. Metabolic engineering with Dof1 transcription factor in plants: Improved nitrogen assimilation and growth under low-nitrogen conditions. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[52] S. Yanagisawa. Dof domain proteins: plant-specific transcription factors associated with diverse phenomena unique to plants. , 2004, Plant & cell physiology.
[53] A. Sandelin,et al. Applied bioinformatics for the identification of regulatory elements , 2004, Nature Reviews Genetics.
[54] M. Esaka,et al. The Dof domain, a zinc finger DNA-binding domain conserved only in higher plants, truly functions as a Cys2/Cys2 Zn finger domain. , 2004, The Plant journal : for cell and molecular biology.
[55] K. Washio. Functional Dissections between GAMYB and Dof Transcription Factors Suggest a Role for Protein-Protein Associations in the Gibberellin-Mediated Expression of the RAmy1A Gene in the Rice Aleurone , 2003, Plant Physiology.
[56] Jesús Vicente-Carbajosa,et al. Genome-wide comparative phylogenetic analysis of the rice and Arabidopsis Dof gene families , 2003, BMC Evolutionary Biology.
[57] S. Yanagisawa. The Dof family of plant transcription factors. , 2002, Trends in plant science.
[58] S. Yanagisawa,et al. Specificity of the Stimulatory Interaction between Chromosomal HMGB Proteins and the Transcription Factor Dof2 and Its Negative Regulation by Protein Kinase CK2-mediated Phosphorylation* , 2002, The Journal of Biological Chemistry.
[59] C. Camilleri,et al. Mutations in the Dof Zinc Finger Genes DAG2 and DAG1 Influence with Opposite Effects the Germination of Arabidopsis Seeds Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.010491. , 2002, The Plant Cell Online.
[60] I. Díaz,et al. The GAMYB protein from barley interacts with the DOF transcription factor BPBF and activates endosperm-specific genes during seed development. , 2002, The Plant journal : for cell and molecular biology.
[61] R. Voorrips. MapChart: software for the graphical presentation of linkage maps and QTLs. , 2002, The Journal of heredity.
[62] S. Yanagisawa. The transcriptional activation domain of the plant-specific Dof1 factor functions in plant, animal, and yeast cells. , 2001, Plant & cell physiology.
[63] Hong-Gu Kang,et al. Characterization of salicylic acid-responsive, arabidopsis Dof domain proteins: overexpression of OBP3 leads to growth defects. , 2000, The Plant journal : for cell and molecular biology.
[64] S. Yanagisawa. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. , 2000, The Plant journal : for cell and molecular biology.
[65] C. Camilleri,et al. Identification and disruption of an Arabidopsis zinc finger gene controlling seed germination. , 2000, Genes & development.
[66] M. Esaka,et al. Functional analyses of the Dof domain, a zinc finger DNA‐binding domain, in a pumpkin DNA‐binding protein AOBP , 1998, FEBS letters.
[67] S. Yanagisawa. Dof DNA-binding domains of plant transcription factors contribute to multiple protein-protein interactions. , 1997, European journal of biochemistry.
[68] S. Moose,et al. A maize zinc-finger protein binds the prolamin box in zein gene promoters and interacts with the basic leucine zipper transcriptional activator Opaque2. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[69] R. Foley,et al. Interactions between distinct types of DNA binding proteins enhance binding to ocs element promoter sequences. , 1995, The Plant cell.