Proteomics reveals specific biological changes induced by the normothermic machine perfusion of donor kidneys with a significant up-regulation of Latexin

[1]  C. van Kooten,et al.  Complement Is Activated During Normothermic Machine Perfusion of Porcine and Human Discarded Kidneys , 2022, Frontiers in Immunology.

[2]  M. Hoogduijn,et al.  Extracellular Vesicles Released During Normothermic Machine Perfusion Are Associated With Human Donor Kidney Characteristics , 2022, Transplantation.

[3]  David S. Fischer,et al.  Ultra‐high sensitivity mass spectrometry quantifies single‐cell proteome changes upon perturbation , 2022, Molecular systems biology.

[4]  M. Ponczek High Molecular Weight Kininogen: A Review of the Structural Literature , 2021, International journal of molecular sciences.

[5]  A. Saiardi,et al.  Polyphosphate degradation by Nudt3-Zn2+ mediates oxidative stress response. , 2021, Cell reports.

[6]  J. Craig,et al.  Organ donation and transplantation: a multi-stakeholder call to action , 2021, Nature Reviews Nephrology.

[7]  P. Bross,et al.  Electron transfer flavoprotein and its role in mitochondrial energy metabolism in health and disease. , 2021, Gene.

[8]  Jeroen Krijgsveld,et al.  IceR improves proteome coverage and data completeness in global and single-cell proteomics , 2020, Nature Communications.

[9]  P. Cravedi,et al.  Review: Ischemia Reperfusion Injury—A Translational Perspective in Organ Transplantation , 2020, International journal of molecular sciences.

[10]  V. Ronca,et al.  Organ Restoration With Normothermic Machine Perfusion and Immune Reaction , 2020, Frontiers in Immunology.

[11]  P. Friend,et al.  Urine recirculation prolongs normothermic kidney perfusion via more optimal metabolic homeostasis—a proteomics study , 2020, American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons.

[12]  M. Nicholson,et al.  Normothermic kidney perfusion: An overview of protocols and strategies , 2020, American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons.

[13]  I. Jurisica,et al.  Normothermic Ex-vivo Kidney Perfusion in a Porcine Auto-Transplantation Model Preserves the Expression of Key Mitochondrial Proteins: An Unbiased Proteomics Analysis , 2020, bioRxiv.

[14]  I. Jochmans,et al.  Kidney Perfusion as an Organ Quality Assessment Tool—Are We Counting Our Chickens Before They Have Hatched? , 2020, Journal of clinical medicine.

[15]  D. B. Lu,et al.  Brief Normothermic Machine Perfusion Rejuvenates Discarded Human Kidneys , 2019, Transplantation direct.

[16]  J. Vilo,et al.  g:Profiler: a web server for functional enrichment analysis and conversions of gene lists (2019 update) , 2019, Nucleic Acids Res..

[17]  Tanveer S. Batth,et al.  Protein Aggregation Capture on Microparticles Enables Multipurpose Proteomics Sample Preparation* , 2019, Molecular & Cellular Proteomics.

[18]  L. Mjörnstedt,et al.  The risk of graft loss 5 years after kidney transplantation is increased if cold ischemia time exceeds 14 hours , 2018, Clinical transplantation.

[19]  P. Friend,et al.  Twenty‐four–hour normothermic perfusion of discarded human kidneys with urine recirculation , 2018, American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons.

[20]  Alexey I Nesvizhskii,et al.  MSFragger: ultrafast and comprehensive peptide identification in shotgun proteomics , 2017, Nature Methods.

[21]  R. Ploeg,et al.  Past, Present, and Future of Dynamic Kidney and Liver Preservation and Resuscitation , 2016, American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons.

[22]  A. Hertig,et al.  Alteration of Fatty Acid Oxidation in Tubular Epithelial Cells: From Acute Kidney Injury to Renal Fibrogenesis , 2015, Front. Med..

[23]  Rachel J. Johnson,et al.  Kidney donation after circulatory death (DCD): state of the art. , 2015, Kidney international.

[24]  X. Jouven,et al.  Long term outcomes of transplantation using kidneys from expanded criteria donors: prospective, population based cohort study , 2015, BMJ : British Medical Journal.

[25]  M. Salvadori,et al.  Update on ischemia-reperfusion injury in kidney transplantation: Pathogenesis and treatment. , 2015, World journal of transplantation.

[26]  H. Snieder,et al.  Hypoxia and Complement-and-Coagulation Pathways in the Deceased Organ Donor as the Major Target for Intervention to Improve Renal Allograft Outcome , 2015, Transplantation.

[27]  M. Nicholson,et al.  Normothermic machine perfusion of the kidney: better conditioning and repair? , 2015, Transplant international : official journal of the European Society for Organ Transplantation.

[28]  R. Ploeg,et al.  Hypothermic machine perfusion of kidneys retrieved from standard and high‐risk donors , 2015, Transplant international : official journal of the European Society for Organ Transplantation.

[29]  J. Wiśniewski,et al.  Fast and sensitive total protein and Peptide assays for proteomic analysis. , 2015, Analytical chemistry.

[30]  A. Djamali,et al.  The role of complement in the pathogenesis of renal ischemia-reperfusion injury and fibrosis , 2014, Fibrogenesis & tissue repair.

[31]  Qing-Feng Ni,et al.  Latexin exhibits tumor suppressor potential in hepatocellular carcinoma. , 2014, Oncology reports.

[32]  J. Thurman,et al.  The role of the complement system in acute kidney injury. , 2013, Seminars in nephrology.

[33]  S. Rong,et al.  Role of fibrinogen in acute ischemic kidney injury. , 2013, American journal of physiology. Renal physiology.

[34]  V. Vaidya,et al.  Heterozygosity for Fibrinogen Results in Efficient Resolution of Kidney Ischemia Reperfusion Injury , 2012, PloS one.

[35]  Wuding Zhou,et al.  C3a and C5a promote renal ischemia-reperfusion injury. , 2012, Journal of the American Society of Nephrology : JASN.

[36]  B. Yard,et al.  Targeting complement activation in brain-dead donors improves renal function after transplantation. , 2011, Transplant immunology.

[37]  Giulio Superti-Furga,et al.  Initial characterization of the human central proteome , 2011, BMC Systems Biology.

[38]  J. Huntington,et al.  Thrombin Inhibition by Serpins Disrupts Exosite II* , 2010, The Journal of Biological Chemistry.

[39]  B. Koeppen The kidney and acid-base regulation. , 2009, Advances in physiology education.

[40]  M. Mann,et al.  MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification , 2008, Nature Biotechnology.

[41]  Pedro Mejia,et al.  Biological activities of C1 inhibitor. , 2008, Molecular immunology.

[42]  Benjamin D. Sachs,et al.  Fibrinogen inhibits neurite outgrowth via β3 integrin-mediated phosphorylation of the EGF receptor , 2007, Proceedings of the National Academy of Sciences.

[43]  H. Ishii,et al.  EF6265, a Novel Plasma Carboxypeptidase B Inhibitor, Protects against Renal Dysfunction in Rat Thrombotic Glomerulonephritis through Enhancing Fibrinolysis , 2007, Nephron Experimental Nephrology.

[44]  N. Mackman,et al.  Tissue factor deficiency and PAR-1 deficiency are protective against renal ischemia reperfusion injury. , 2007, Blood.

[45]  J. Wetzels,et al.  Long-term outcome of renal transplantation from older donors. , 2006, The New England journal of medicine.

[46]  P. Koolwijk,et al.  Fibrin structure and wound healing , 2006, Journal of thrombosis and haemostasis : JTH.

[47]  N. Mackman,et al.  The synthetic pentasaccharide fondaparinux reduces coagulation, inflammation and neutrophil accumulation in kidney ischemia–reperfusion injury , 2005, Journal of thrombosis and haemostasis : JTH.

[48]  J. Köhl,et al.  Complement Factor C5a Mediates Renal Ischemia-Reperfusion Injury Independent from Neutrophils1 , 2003, The Journal of Immunology.

[49]  J. Davidson,et al.  Wound-healing defects in mice lacking fibrinogen. , 2001, Blood.

[50]  E. Gardiner,et al.  A Mitogenic Action for Fibrinogen Mediated through Intercellular Adhesion Molecule-1* , 1997, The Journal of Biological Chemistry.

[51]  I. Singh,et al.  Alterations of peroxisomal function in ischemia-reperfusion injury of rat kidney. , 1993, Biochimica et biophysica acta.

[52]  H. Druid,et al.  Fibrin deposition in the kidney in post-ischaemic renal damage. , 1988, British journal of experimental pathology.

[53]  B. Osterud,et al.  Activation of factor IX by the reaction product of tissue factor and factor VII: additional pathway for initiating blood coagulation. , 1977, Proceedings of the National Academy of Sciences of the United States of America.

[54]  G. Laurent,et al.  Fibrinogen , 1968, Reactions Weekly.

[55]  D. Witte,et al.  Fibrin(ogen) exacerbates inflammatory joint disease through a mechanism linked to the integrin alphaMbeta2 binding motif. , 2007, The Journal of clinical investigation.

[56]  Long Yu,et al.  Cloning, tissue expression pattern and genomic organization of latexin, a human homologue of rat carboxypeptidase A inhibitor , 2004, Molecular Biology Reports.