Analysis of E.coli promoter recognition problem in dinucleotide feature space
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[1] C. Harley,et al. Analysis of E. coli promoter sequences. , 1987, Nucleic acids research.
[2] A. A. Reilly,et al. An expectation maximization (EM) algorithm for the identification and characterization of common sites in unaligned biopolymer sequences , 1990, Proteins.
[3] I Mahadevan,et al. Analysis of E.coli promoter structures using neural networks. , 1994, Nucleic acids research.
[4] S. Aiyar,et al. Escherichia coli Promoters with UP Elements of Different Strengths: Modular Structure of Bacterial Promoters , 1998, Journal of bacteriology.
[5] T. Werner. Models for prediction and recognition of eukaryotic promoters , 1999, Mammalian Genome.
[6] Hanah Margalit,et al. PromEC: An updated database of Escherichia coli mRNA promoters with experimentally identified transcriptional start sites , 2001, Nucleic Acids Res..
[7] Dennis Shasha,et al. DNA sequence classification via an expectation maximization algorithm and neural networks: a case study , 2001, IEEE Trans. Syst. Man Cybern. Part C.
[8] G. Rubin,et al. Computational analysis of core promoters in the Drosophila genome , 2002, Genome Biology.
[9] Julio Collado-Vides,et al. Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals. , 2003, Journal of molecular biology.
[10] S. Durga Bhavani,et al. Identification of Promoter Region in a DNA Sequence Using EM Algorithm and Neural Networks , 2003, IICAI.
[11] Alexander Gammerman,et al. Sequence alignment kernel for recognition of promoter regions , 2003, Bioinform..
[12] G. Stormo,et al. Expectation maximization algorithm for identifying protein-binding sites with variable lengths from unaligned DNA fragments. , 1992, Journal of molecular biology.
[13] Vasile Palade,et al. A neural network based multi-classifier system for gene identification in DNA sequences , 2004, Neural Computing & Applications.
[14] Cheng-Jian Lin,et al. Prediction of RNA Polymerase Binding Sites Using Purine-Pyrimidine Encoding and Hybrid Learning Methods , 2004 .
[15] Kiyoshi Asai,et al. Extracting relations between promoter sequences and their strengths from microarray data , 2005, Bioinform..
[16] Armin Shmilovici,et al. Identification of transcription factor binding sites with variable-order Bayesian networks , 2005, Bioinform..