CanSNPer: a hierarchical genotype classifier of clonal pathogens
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Anders Johansson | Andreas Sjödin | Pär Larsson | Mats Forsman | Adrian Lärkeryd | Kerstin Myrtennäs | Edvin Karlsson | Chinmay Kumar Dwibedi | M. Forsman | A. Sjödin | A. Lärkeryd | K. Myrtennäs | P. Larsson | A. Johansson | C. Dwibedi | E. Karlsson | Pär Larsson | Kerstin Myrtennäs | Adrian Lärkeryd
[1] Paul Keim,et al. Phylogeography of Francisella tularensis subsp. holarctica, Europe , 2012, Emerging infectious diseases.
[2] J. Ravel,et al. Bacillus anthracis in China and its relationship to worldwide lineages , 2009, BMC Microbiology.
[3] Raymond K. Auerbach,et al. Phylogeography of Francisella tularensis: Global Expansion of a Highly Fit Clone , 2009, Journal of bacteriology.
[4] Lynn Y. Huynh,et al. Global Genetic Population Structure of Bacillus anthracis , 2007, PloS one.
[5] Mats Forsman,et al. A Real-Time PCR Array for Hierarchical Identification of Francisella Isolates , 2009, PloS one.
[6] Daniel J. Blankenberg,et al. Galaxy: A Web‐Based Genome Analysis Tool for Experimentalists , 2010, Current protocols in molecular biology.
[7] Paul Keim,et al. Single Nucleotide Polymorphism Typing of Bacillus anthracis from Sverdlovsk Tissue , 2008, Emerging infectious diseases.
[8] Bart van Rotterdam,et al. Eight New Genomes and Synthetic Controls Increase the Accessibility of Rapid Melt-MAMA SNP Typing of Coxiella burnetii , 2014, PloS one.
[9] Petter Lindgren,et al. The phylogeographic pattern of Francisella tularensis in Sweden indicates a Scandinavian origin of Eurosiberian tularaemia. , 2013, Environmental microbiology.
[10] A. Nekrutenko,et al. Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences , 2010, Genome Biology.
[11] Giovanna Morelli,et al. Phylogenetic diversity and historical patterns of pandemic spread of Yersinia pestis , 2010, Nature Genetics.
[12] Mark Achtman,et al. Insights from genomic comparisons of genetically monomorphic bacterial pathogens , 2012, Philosophical Transactions of the Royal Society B: Biological Sciences.
[13] N. Perna,et al. progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement , 2010, PloS one.
[14] Paul Keim,et al. Phylogeography of Francisella tularensis subspecies holarctica from the country of Georgia , 2011, BMC Microbiology.
[15] Paul Keim,et al. Whole Genome Sequence Analysis of Cryptococcus gattii from the Pacific Northwest Reveals Unexpected Diversity , 2011, PloS one.
[16] Paul Keim,et al. Rapid Typing of Coxiella burnetii , 2011, PloS one.
[17] Joaquín Dopazo,et al. ETE: a python Environment for Tree Exploration , 2010, BMC Bioinformatics.
[18] Amy J. Vogler,et al. Phylogeography of Francisella tularensis ssp. holarctica in France , 2011, Letters in applied microbiology.
[19] Paul Keim,et al. Phylogeography and Molecular Epidemiology of Yersinia pestis in Madagascar , 2011, PLoS neglected tropical diseases.
[20] Daniel J. Blankenberg,et al. Galaxy: a platform for interactive large-scale genome analysis. , 2005, Genome research.
[21] Mark Achtman,et al. Transforming Microbial Genotyping: A Robotic Pipeline for Genotyping Bacterial Strains , 2012, PloS one.
[22] Paul Keim,et al. Next-Generation Sequencing of Coccidioides immitis Isolated during Cluster Investigation , 2011, Emerging infectious diseases.