A plant genetic network for preventing dysbiosis in the phyllosphere
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S. He | K. Nomura | Jin Xu | R. Sohrabi | Xiu-Fang Xin | Ertao Wang | Lingya Yao | Bradley C. Paasch | Yuti Cheng | Li Zhang | Nian Wang | Xiaolin Wang | J. Kremer | Tao Chen | Li Ma
[1] William A. Walters,et al. Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 , 2019, Nature Biotechnology.
[2] Na Zhang,et al. NRT1.1B is associated with root microbiota composition and nitrogen use in field-grown rice , 2019, Nature Biotechnology.
[3] N. Zhang,et al. NRT1.1B is associated with root microbiota composition and nitrogen use in field-grown rice , 2019, Nature Biotechnology.
[4] Donovan H. Parks,et al. A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life , 2018, Nature Biotechnology.
[5] R. Garrido-Oter,et al. Microbial Interkingdom Interactions in Roots Promote Arabidopsis Survival , 2018, Cell.
[6] W. Turpin,et al. Determinants of IBD Heritability: Genes, Bugs, and More. , 2018, Inflammatory bowel diseases.
[7] Young-Mo Kim,et al. Drought delays development of the sorghum root microbiome and enriches for monoderm bacteria , 2018, Proceedings of the National Academy of Sciences.
[8] V. Sundaresan,et al. Compositional shifts in root-associated bacterial and archaeal microbiota track the plant life cycle in field-grown rice , 2018, PLoS biology.
[9] J. Tiedje,et al. FlowPot axenic plant growth system for microbiota research , 2018, bioRxiv.
[10] J. Whisstock,et al. Perforin-A key (shaped) weapon in the immunological arsenal. , 2017, Seminars in cell & developmental biology.
[11] J. Friml,et al. BEN3/BIG2 ARF GEF is Involved in Brefeldin A-Sensitive Trafficking at the trans-Golgi Network/Early Endosome in Arabidopsis thaliana , 2017, Plant & cell physiology.
[12] Ramnik J. Xavier,et al. Human genetic variation and the gut microbiome in disease , 2017, Nature Reviews Genetics.
[13] C. Zipfel,et al. Function, Discovery, and Exploitation of Plant Pattern Recognition Receptors for Broad-Spectrum Disease Resistance. , 2017, Annual review of phytopathology.
[14] Omri M. Finkel,et al. Understanding and exploiting plant beneficial microbes. , 2017, Current opinion in plant biology.
[15] Christian Messier,et al. Leaf bacterial diversity mediates plant diversity and ecosystem function relationships , 2017, Nature.
[16] Jian-Min Zhou,et al. Receptor Kinases in Plant-Pathogen Interactions: More Than Pattern Recognition[OPEN] , 2017, Plant Cell.
[17] S. Koren,et al. Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation , 2016, bioRxiv.
[18] Aleksandra A. Kolodziejczyk,et al. Dysbiosis and the immune system , 2017, Nature Reviews Immunology.
[19] Dmitri A. Nusinow,et al. Mapping Protein-Protein Interactions Using Affinity Purification and Mass Spectrometry. , 2017, Methods in molecular biology.
[20] Daniel B. Müller,et al. The Plant Microbiota: Systems-Level Insights and Perspectives. , 2016, Annual review of genetics.
[21] Jeff H. Chang,et al. Bacteria establish an aqueous living space in plants crucial for virulence , 2016, Nature.
[22] S. Tringe,et al. Host genotype and age shape the leaf and root microbiomes of a wild perennial plant , 2016, Nature Communications.
[23] Paul J. McMurdie,et al. DADA2: High resolution sample inference from Illumina amplicon data , 2016, Nature Methods.
[24] Sudhir Kumar,et al. MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets. , 2016, Molecular biology and evolution.
[25] C. Pieterse,et al. The Soil-Borne Supremacy. , 2016, Trends in plant science.
[26] Christopher J Petzold,et al. Free-Flow Electrophoresis of Plasma Membrane Vesicles Enriched by Two-Phase Partitioning Enhances the Quality of the Proteome from Arabidopsis Seedlings. , 2016, Journal of proteome research.
[27] Alice C. McHardy,et al. Functional overlap of the Arabidopsis leaf and root microbiota , 2015, Nature.
[28] Korbinian Schneeberger,et al. SHOREmap v3.0: fast and accurate identification of causal mutations from forward genetic screens. , 2015, Methods in molecular biology.
[29] Christina A. Cuomo,et al. Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement , 2014, PloS one.
[30] Bjarni J. Vilhjálmsson,et al. Genome-wide association study of Arabidopsis thaliana's leaf microbial community , 2014, Nature Communications.
[31] Arnold J. Bloom,et al. Easy Leaf Area: Automated digital image analysis for rapid and accurate measurement of leaf area1 , 2014, Applications in plant sciences.
[32] J. Vorholt,et al. A Synthetic Community Approach Reveals Plant Genotypes Affecting the Phyllosphere Microbiota , 2014, PLoS genetics.
[33] D. Guttman,et al. Next-generation mapping of genetic mutations using bulk population sequencing. , 2014, Methods in molecular biology.
[34] J. Friml,et al. Fluorescence Imaging-Based Screen Identifies ARF GEF Component of Early Endosomal Trafficking , 2014, Current Biology.
[35] E. Podack,et al. Killing machines: three pore-forming proteins of the immune system , 2013, Immunologic research.
[36] C. Pieterse,et al. The rhizosphere microbiome and plant health. , 2012, Trends in plant science.
[37] William A. Walters,et al. Impact of training sets on classification of high-throughput bacterial 16s rRNA gene surveys , 2011, The ISME Journal.
[38] G. Nava,et al. Host genetic susceptibility, dysbiosis, and viral triggers in inflammatory bowel disease , 2011, Current opinion in gastroenterology.
[39] Jeff H. Chang,et al. Effector-triggered immunity blocks pathogen degradation of an immunity-associated vesicle traffic regulator in Arabidopsis , 2011, Proceedings of the National Academy of Sciences.
[40] Marcel Martin. Cutadapt removes adapter sequences from high-throughput sequencing reads , 2011 .
[41] H. Sokol,et al. The intestinal microbiota in inflammatory bowel diseases: time to connect with the host , 2010, Current opinion in gastroenterology.
[42] Mark D. Robinson,et al. edgeR: a Bioconductor package for differential expression analysis of digital gene expression data , 2009, Bioinform..
[43] J. Glazebrook,et al. Network Properties of Robust Immunity in Plants , 2009, PLoS genetics.
[44] Martin Hartmann,et al. Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities , 2009, Applied and Environmental Microbiology.
[45] J. Friml,et al. Fluorescence Imaging-Based Screen Identifies ARF GEF Component of Early Endosomal Trafficking , 2009, Current Biology.
[46] Sheng Yang He,et al. A Bacterial Virulence Protein Suppresses Host Innate Immunity to Cause Plant Disease , 2006, Science.
[47] H. Yoshioka,et al. The Arabidopsis gene CAD1 controls programmed cell death in the plant immune system and encodes a protein containing a MACPF domain. , 2005, Plant & cell physiology.
[48] C. Larsson,et al. Arabidopsis plasma membrane proteomics identifies components of transport, signal transduction and membrane trafficking. , 2004, Plant & cell physiology.
[49] Jonathan D. G. Jones,et al. Bacterial disease resistance in Arabidopsis through flagellin perception , 2004, Nature.
[50] S. Lindow,et al. Microbiology of the Phyllosphere , 2003, Applied and Environmental Microbiology.
[51] T. Boller,et al. Plants have a sensitive perception system for the most conserved domain of bacterial flagellin. , 1999, The Plant journal : for cell and molecular biology.
[52] S. Lindow,et al. Bacterial colonization of leaves: a spectrum of strategies. , 1999, Phytopathology.
[53] S. Clough,et al. Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. , 1998, The Plant journal : for cell and molecular biology.
[54] Y. Benjamini,et al. Controlling the false discovery rate: a practical and powerful approach to multiple testing , 1995 .