Using bioinformatic resources in the proteomic analysis of biological fluids
暂无分享,去创建一个
[1] R D Appel,et al. SWISS‐2DPAGE: A database of two‐dimensional gel electrophoresis images , 1993, Electrophoresis.
[2] G A Orr,et al. Two‐dimensional protein electrophoresis and multiple hypothesis testing to detect potential serum protein biomarkers in children with fetal alcohol syndrome , 1995, Electrophoresis.
[3] J. Celis,et al. Towards a comprehensive database of proteins from the urine of patients with bladder cancer. , 1996, The Journal of urology.
[4] Roberto Raggiaschi,et al. A two‐dimensional protein map of human amniotic fluid at 17 weeks' gestation , 1997, Electrophoresis.
[5] Ruddy Wattiez,et al. Human bronchoalveolar lavage fluid: Two‐dimensional gel electrophoresis, amino acid microsequencing and identification of major proteins , 1999, Electrophoresis.
[6] R D Appel,et al. Two‐dimensional electrophoresis resources available from ExPASy , 1999, Electrophoresis.
[7] I. Thalmann,et al. Proteomics and the Inner Ear , 2002, Disease markers.
[8] Andreas Bohne,et al. SWEET-DB: an attempt to create annotated data collections for carbohydrates , 2002, Nucleic Acids Res..
[9] N. Anderson,et al. The Human Plasma Proteome , 2002, Molecular & Cellular Proteomics.
[10] Rolf Apweiler,et al. The Proteomics Standards Initiative , 2003, Proteomics.
[11] Aubrey E. Hill,et al. The UAB Proteomics Database , 2003, Bioinform..
[12] Maria Jesus Martin,et al. The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003 , 2003, Nucleic Acids Res..
[13] Hiren J. Joshi,et al. GlycoSuiteDB: a curated relational database of glycoprotein glycan structures and their biological sources. 2003, update , 2003, Nucleic Acids Res..
[14] Enrico Bertino,et al. Structural proteome of human colostral fat globule membrane proteins , 2003, Proteomics.
[15] David Botstein,et al. SOURCE: a unified genomic resource of functional annotations, ontologies, and gene expression data , 2003, Nucleic Acids Res..
[16] Pierre-Alain Binz,et al. The Make 2D‐DB II package: Conversion of federated two‐dimensional gel electrophoresis databases into a relational format and interconnection of distributed databases , 2003, Proteomics.
[17] Robert S. Ledley,et al. The Protein Information Resource , 2003, Nucleic Acids Res..
[18] L. M. Glodé,et al. A comprehensive characterization of the peptide and protein constituents of human seminal fluid , 2004, The Prostate.
[19] Carol S. Giometti,et al. GELBANK: a database of annotated two-dimensional gel electrophoresis patterns of biological systems with completed genomes , 2004, Nucleic Acids Res..
[20] Barbara A. Wetmore,et al. Toxicoproteomics: proteomics applied to toxicology and pathology. , 2004, Toxicologic pathology.
[21] S. Batalov,et al. A gene atlas of the mouse and human protein-encoding transcriptomes. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[22] C. Hoogland,et al. SWISS‐2DPAGE, ten years later , 2004, Proteomics.
[23] Kelvin H Lee,et al. Towards two‐dimensional electrophoresis mapping of the cerebrospinal fluid proteome from a single individual , 2004, Electrophoresis.
[24] David S. Wishart,et al. GelScape: a web-based server for interactively annotating, manipulating, comparing and archiving 1D and 2D gel images , 2004, Bioinform..
[25] Jean-Charles Sanchez,et al. Cystatin C as a potential cerebrospinal fluid marker for the diagnosis of Creutzfeldt‐Jakob disease , 2004, Proteomics.
[26] E. Birney,et al. Reactome: a knowledgebase of biological pathways , 2004, Nucleic Acids Research.
[27] E. Birney,et al. The International Protein Index: An integrated database for proteomics experiments , 2004, Proteomics.
[28] Xuefeng He,et al. A system for integrative and post-planned analysis of 2-DE/MS centered proteomics data , 2005, J. Integr. Bioinform..
[29] Cathy H. Wu,et al. The Universal Protein Resource (UniProt) , 2005, Nucleic Acids Res..
[30] William R. Hersh,et al. A survey of current work in biomedical text mining , 2005, Briefings Bioinform..
[31] Nichole L. King,et al. Human Plasma PeptideAtlas , 2005, Proteomics.
[32] Catherine Brooksbank,et al. The European Bioinformatics Institute's data resources: towards systems biology , 2004, Nucleic Acids Res..
[33] Jonas S. Almeida,et al. AGML Central: web based gel proteomic infrastructure , 2005, Bioinform..
[34] Erik K. Malm,et al. A Human Protein Atlas for Normal and Cancer Tissues Based on Antibody Proteomics* , 2005, Molecular & Cellular Proteomics.
[35] Johann Joets,et al. PROTICdb: A web‐based application to store, track, query, and compare plant proteome data , 2005, Proteomics.
[36] Nichole L. King,et al. The PeptideAtlas Project , 2010, Proteome Bioinformatics.
[37] P. Bork,et al. Literature mining for the biologist: from information retrieval to biological discovery , 2006, Nature Reviews Genetics.
[38] K. Chisholm,et al. Targeted comparative proteomics by liquid chromatography/matrix-assisted laser desorption/ionization triple-quadrupole mass spectrometry. , 2006, Rapid communications in mass spectrometry : RCM.
[39] Lennart Martens,et al. PRIDE: a public repository of protein and peptide identifications for the proteomics community , 2005, Nucleic Acids Res..
[40] Kiyoko F. Aoki-Kinoshita,et al. KEGG as a glycome informatics resource. , 2006, Glycobiology.
[41] Robert D. Finn,et al. Pfam: clans, web tools and services , 2005, Nucleic Acids Res..
[42] Peer Bork,et al. SMART 5: domains in the context of genomes and networks , 2005, Nucleic Acids Res..
[43] P. Righetti,et al. Searching for markers of Creutzfeldt‐Jakob disease in cerebrospinal fluid by two‐dimensional mapping , 2006, Proteomics.
[44] Markus Müller,et al. Automated protein identification by tandem mass spectrometry: issues and strategies. , 2006, Mass spectrometry reviews.
[45] D. T. Wong,et al. Human body fluid proteome analysis , 2006, Proteomics.
[46] Frédérique Lisacek,et al. Proteome informatics II: Bioinformatics for comparative proteomics , 2006, Proteomics.
[47] Kiyoko F. Aoki-Kinoshita,et al. From genomics to chemical genomics: new developments in KEGG , 2005, Nucleic Acids Res..
[48] Gary D. Bader,et al. Pathguide: a Pathway Resource List , 2005, Nucleic Acids Res..
[49] Ron D Appel,et al. Proteome informatics I: Bioinformatics tools for processing experimental data , 2006, Proteomics.
[50] Ying Zhang,et al. HMDB: the Human Metabolome Database , 2007, Nucleic Acids Res..
[51] M. Girolami,et al. Clinical proteomics: A need to define the field and to begin to set adequate standards , 2007, Proteomics. Clinical applications.
[52] Naoyuki Taniguchi,et al. Comparison of the methods for profiling glycoprotein glycans--HUPO Human Disease Glycomics/Proteome Initiative multi-institutional study. , 2007, Glycobiology.
[53] V. Thongboonkerd. Proteomics of human body fluids : principles, methods, and applications , 2007 .
[54] Jun Adachi,et al. MAPU: Max-Planck Unified database of organellar, cellular, tissue and body fluid proteomes , 2006, Nucleic Acids Res..