Draft Genome Sequences of Alternaria Strains Isolated from Grapes and Apples

Here, we report the draft genome sequences of Alternaria alternata, isolated from seedless grapes, and Alternaria arborescens and Alternaria atra, isolated from Red Delicious apples, all from the Washington, DC, area. ABSTRACT Here, we report the draft genome sequences of Alternaria alternata, isolated from seedless grapes, and Alternaria arborescens and Alternaria atra, isolated from Red Delicious apples, all from the Washington, DC, area.

[1]  M. Mammel,et al.  Draft Genome Sequences of 12 Isolates from 3 Fusarium Species Recovered from Moldy Peanuts , 2019, Microbiology Resource Announcements.

[2]  Mosè Manni,et al.  BUSCO: Assessing Genome Assembly and Annotation Completeness. , 2019, Methods in molecular biology.

[3]  G. Font,et al.  Alternaria Mycotoxins in Food and Feed: An Overview , 2017 .

[4]  M. Fabra,et al.  Biopolymer-Based Coatings and Packaging Structures for Improved Food Quality , 2017 .

[5]  C. Lawrence,et al.  The Alternaria genomes database: a comprehensive resource for a fungal genus comprised of saprophytes, plant pathogens, and allergenic species , 2015, BMC Genomics.

[6]  Björn Usadel,et al.  Trimmomatic: a flexible trimmer for Illumina sequence data , 2014, Bioinform..

[7]  Alexey A. Gurevich,et al.  QUAST: quality assessment tool for genome assemblies , 2013, Bioinform..

[8]  M. Metzler,et al.  Identification of a Polyketide Synthase Required for Alternariol (AOH) and Alternariol-9-Methyl Ether (AME) Formation in Alternaria alternata , 2012, PloS one.

[9]  Sergey I. Nikolenko,et al.  SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing , 2012, J. Comput. Biol..

[10]  R. Dietrich,et al.  Widespread occurrence of low levels of alternariol in apple and tomato products, as determined by comparative immunochemical assessment using monoclonal and polyclonal antibodies. , 2011, Journal of agricultural and food chemistry.

[11]  V. Tournas,et al.  Internal contamination and spoilage of harvested apples by patulin-producing and other toxigenic fungi. , 2009, International journal of food microbiology.

[12]  V H Tournas,et al.  Mould and yeast flora in fresh berries, grapes and citrus fruits. , 2005, International journal of food microbiology.

[13]  S. S. Deshpande,et al.  Handbook of Food Toxicology , 2002 .

[14]  P. Scott Analysis of agricultural commodities and foods for Alternaria mycotoxins. , 2001, Journal of AOAC International.

[15]  S. E. López,et al.  Mycotoxin production by Alternaria alternata strains isolated from red delicious apples in Argentina. , 1995, International journal of food microbiology.

[16]  J. Pitt,et al.  Fungi and Food Spoilage , 1987 .