Drug discovery and computational strategies in the multitarget drugs era
暂无分享,去创建一个
Marcus Tullius Scotti | Jessika de Oliveira Viana | Mayara Barbalho Félix | Mayarara dos Santos Maia | Vanessa de Lima Serafim | Luciana Scotti | M. Scotti | J. O. Viana | L. Scotti | M. Maia | M. B. Félix | V. D. L. Serafim
[1] Feng Luan,et al. A ligand-based approach for the in silico discovery of multi-target inhibitors for proteins associated with HIV infection. , 2012, Molecular bioSystems.
[2] J. Levine,et al. Surfing the p53 network , 2000, Nature.
[3] A Lavecchia,et al. Virtual screening strategies in drug discovery: a critical review. , 2013, Current medicinal chemistry.
[4] Adrian L Gill,et al. A comparison of physicochemical property profiles of marketed oral drugs and orally bioavailable anti-cancer protein kinase inhibitors in clinical development. , 2007, Current topics in medicinal chemistry.
[5] N. Jain,et al. 3-Aryl-1-phenyl-1H-pyrazole derivatives as new multitarget directed ligands for the treatment of Alzheimer's disease, with acetylcholinesterase and monoamine oxidase inhibitory properties , 2013, EXCLI journal.
[6] Peter Kolb,et al. Identifying modulators of CXC receptors 3 and 4 with tailored selectivity using multi-target docking. , 2015, ACS chemical biology.
[7] Yuzong Chen,et al. Olaparib hydroxamic acid derivatives as dual PARP and HDAC inhibitors for cancer therapy. , 2017, Bioorganic & medicinal chemistry.
[8] Azizeh Abdolmaleki,et al. Computer Aided Drug Design for Multi-Target Drug Design: SAR /QSAR, Molecular Docking and Pharmacophore Methods. , 2017, Current drug targets.
[9] Feng Luan,et al. Multi-target inhibitors for proteins associated with Alzheimer: in silico discovery using fragment-based descriptors. , 2013, Current Alzheimer research.
[10] K. Bae,et al. Protective action of honokiol, administered orally, against oxidative stress in brain of mice challenged with NMDA. , 2007, Phytomedicine : international journal of phytotherapy and phytopharmacology.
[11] Xi-can Tang,et al. Huperzine A exhibits anti‐inflammatory and neuroprotective effects in a rat model of transient focal cerebral ischemia , 2008, Journal of neurochemistry.
[12] G. Church,et al. Identifying regulatory networks by combinatorial analysis of promoter elements , 2001, Nature Genetics.
[13] Lin Zhou,et al. Rational design and synthesis of highly potent anti-acetylcholinesterase activity huperzine A derivatives. , 2009, Bioorganic & medicinal chemistry.
[14] S. Brooker,et al. Cutaneous leishmaniasis. , 2007, The Lancet. Infectious diseases.
[15] Weiwei Xue,et al. The Human Kinome Targeted by FDA Approved Multi-Target Drugs and Combination Products: A Comparative Study from the Drug-Target Interaction Network Perspective , 2016, PloS one.
[16] Andrea Armirotti,et al. Multitarget drug discovery for Alzheimer's disease: triazinones as BACE-1 and GSK-3β inhibitors. , 2015, Angewandte Chemie.
[17] Daniel Cappel,et al. Accurate Binding Free Energy Predictions in Fragment Optimization , 2015, J. Chem. Inf. Model..
[18] Gabriela Chiosis,et al. Identification of potent water soluble purine-scaffold inhibitors of the heat shock protein 90. , 2006, Journal of medicinal chemistry.
[19] Gabriela Chiosis,et al. Evaluation of 8-arylsulfanyl, 8-arylsulfoxyl, and 8-arylsulfonyl adenine derivatives as inhibitors of the heat shock protein 90. , 2005, Journal of medicinal chemistry.
[20] J. Choe,et al. Characterization of Imidazo[4,5-d]Pyridazine Nucleosides as Modulators of Unwinding Reaction Mediated by West Nile Virus Nucleoside Triphosphatase/Helicase: Evidence for Activity on the Level of Substrate and/or Enzyme , 2002, Antimicrobial Agents and Chemotherapy.
[21] Richard Morphy,et al. Designed Multiple Ligands. An Emerging Drug Discovery Paradigm , 2006 .
[22] Humberto González-Díaz,et al. First computational chemistry multi-target model for anti-Alzheimer, anti-parasitic, anti-fungi, and anti-bacterial activity of GSK-3 inhibitors in vitro, in vivo, and in different cellular lines , 2011, Molecular Diversity.
[23] Christopher M. Overall,et al. Validating matrix metalloproteinases as drug targets and anti-targets for cancer therapy , 2006, Nature Reviews Cancer.
[24] Aniruddha Datta,et al. Towards targeted combinatorial therapy design for the treatment of castration-resistant prostate cancer , 2017, BMC Bioinformatics.
[26] Xinyang Hu,et al. Baicalin attenuates oxygen-glucose deprivation-induced injury via inhibiting NMDA receptor-mediated 5-lipoxygenase activation in rat cortical neurons. , 2007, Pharmacological research.
[27] Matthew P. Repasky,et al. Glide: a new approach for rapid, accurate docking and scoring. 1. Method and assessment of docking accuracy. , 2004, Journal of medicinal chemistry.
[28] Hege S. Beard,et al. Glide: a new approach for rapid, accurate docking and scoring. 2. Enrichment factors in database screening. , 2004, Journal of medicinal chemistry.
[29] Hongmei Wu,et al. Flavonoids as noncompetitive inhibitors of Dengue virus NS2B-NS3 protease: inhibition kinetics and docking studies. , 2015, Bioorganic & medicinal chemistry.
[30] Usman Ali Ashfaq,et al. Molecular Docking Based Screening of Plant Flavonoids as Dengue NS1 Inhibitors , 2014, Bioinformation.
[31] R. Wolkowicz,et al. A Multiplexed Cell-Based Assay for the Identification of Modulators of Pre-Membrane Processing as a Target against Dengue Virus , 2015, Journal of biomolecular screening.
[32] CHUN WEI YAP,et al. PaDEL‐descriptor: An open source software to calculate molecular descriptors and fingerprints , 2011, J. Comput. Chem..
[33] H. Zhang,et al. Huperzine A attenuates mitochondrial dysfunction after middle cerebral artery occlusion in rats , 2008, Journal of neuroscience research.
[34] Ruixin Zhu,et al. Multi-target QSAR Study in the Analysis and Design of HIV-1 Inhibitors† , 2010 .
[35] A. Cavalli,et al. Toward the Development of Dual‐Targeted Glyceraldehyde‐3‐phosphate Dehydrogenase/Trypanothione Reductase Inhibitors against Trypanosoma brucei and Trypanosoma cruzi , 2014, ChemMedChem.
[36] Pushpendra Singh,et al. Multitargeted molecular docking study of plant-derived natural products on phosphoinositide-3 kinase pathway components , 2014, Medicinal Chemistry Research.
[37] G. Trossini,et al. Hologram QSAR Studies of Antiprotozoal Activities of Sesquiterpene Lactones , 2014, Molecules.
[38] Jiansong Fang,et al. In silico Target Fishing for the Potential Targets and Molecular Mechanisms of Baicalein as an Antiparkinsonian Agent: Discovery of the Protective Effects on NMDA Receptor‐Mediated Neurotoxicity , 2013, Chemical biology & drug design.
[39] Kishore R. Sakharkar,et al. Novel phytochemical–antibiotic conjugates as multitarget inhibitors of Pseudomononas aeruginosa GyrB/ParE and DHFR , 2013, Drug design, development and therapy.
[40] Mayank,et al. Molecular docking study of natural alkaloids as multi-targeted hedgehog pathway inhibitors in cancer stem cell therapy , 2016, Comput. Biol. Chem..
[41] Boon Chuan Low,et al. In-Silico Approaches to Multi-target Drug Discovery , 2010, Pharmaceutical Research.
[42] A. Díaz,et al. Leishmaniasis cutánea y herpes zoster multidermatómico , 2013 .
[43] J. Richard Morphy. Chapter 10:The Challenges of Multi-Target Lead Optimization , 2012 .
[44] Feng Luan,et al. Multi-target drug discovery in anti-cancer therapy: fragment-based approach toward the design of potent and versatile anti-prostate cancer agents. , 2011, Bioorganic & medicinal chemistry.
[45] A. Barabasi,et al. Drug—target network , 2007, Nature Biotechnology.
[46] Jeffrey A Jones,et al. Duvelisib, a novel oral dual inhibitor of PI3K-δ,γ, is clinically active in advanced hematologic malignancies. , 2018, Blood.
[47] Richard Morphy,et al. Fragments, network biology and designing multiple ligands. , 2007, Drug discovery today.
[48] Rolf Müller,et al. Crosstalk of oncogenic and prostanoid signaling pathways , 2004, Journal of Cancer Research and Clinical Oncology.
[49] Demin Zhou,et al. Honokiol inhibits the inflammatory reaction during cerebral ischemia reperfusion by suppressing NF-κB activation and cytokine production of glial cells , 2013, Neuroscience Letters.
[50] R. Pérez-Montfort,et al. Potent and Selective Inhibitors of Trypanosoma cruzi Triosephosphate Isomerase with Concomitant Inhibition of Cruzipain: Inhibition of Parasite Growth through Multitarget Activity , 2016, ChemMedChem.
[51] L. M. Espinoza-Fonseca. Targeting MDM2 by the small molecule RITA: towards the development of new multi-target drugs against cancer , 2005, Theoretical Biology and Medical Modelling.
[52] Martin Krug,et al. Recent advances in the development of multi-kinase inhibitors. , 2008, Mini reviews in medicinal chemistry.
[53] Chien-Yu Chen,et al. Insights into designing the dual-targeted HER2/HSP90 inhibitors. , 2010, Journal of molecular graphics & modelling.
[54] Cheng Lu,et al. Macrocyclic compounds as anti-cancer agents: design and synthesis of multi-acting inhibitors against HDAC, FLT3 and JAK2. , 2015, European journal of medicinal chemistry.
[56] Pushpendra Singh,et al. Screening and biological evaluation of myricetin as a multiple target inhibitor insulin, epidermal growth factor, and androgen receptor; in silico and in vitro , 2015, Investigational New Drugs.
[57] B. Cha,et al. Honokiol increases ABCA1 expression level by activating retinoid X receptor beta. , 2010, Biological & pharmaceutical bulletin.
[58] E. Edache,et al. Multivariate QSAR Study of Indole β- Diketo Acid, Diketo Acid and Carboxamide Derivatives as Potent Anti-HIV Agents , 2015 .
[59] Juan M. Luco,et al. QSAR Based on Multiple Linear Regression and PLS Methods for the Anti-HIV Activity of a Large Group of HEPT Derivatives , 1997, J. Chem. Inf. Comput. Sci..
[60] A. Stoppani,et al. Redox cycling of o-naphthoquinones in trypanosomatids. Superoxide and hydrogen peroxide production. , 1996, Biochemical pharmacology.
[61] G. Kaushik,et al. Honokiol induces cytotoxic and cytostatic effects in malignant melanoma cancer cells. , 2012, American journal of surgery.
[62] B. Stockwell,et al. Multicomponent therapeutics for networked systems , 2005, Nature Reviews Drug Discovery.
[63] Xiaomin Luo,et al. Towards discovering dual functional inhibitors against both wild type and K103N mutant HIV-1 reverse transcriptases: molecular docking and QSAR studies on 4,1-benzoxazepinone analogues , 2006, J. Comput. Aided Mol. Des..
[64] D F Hoth,et al. Present status and future prospects for HIV therapies. , 1993, Science.
[65] F. Andrade-Narváez,et al. ANIMAL MODELS FOR THE STUDY OF LEISHMANIASIS IMMUNOLOGY , 2014, Revista do Instituto de Medicina Tropical de Sao Paulo.
[66] Yingbo Li,et al. Design, synthesis and biological evaluation of quinazoline-phosphoramidate mustard conjugates as anticancer drugs. , 2017, European journal of medicinal chemistry.
[67] Pushpendra Singh,et al. Screening of multi-targeted natural compounds for receptor tyrosine kinases inhibitors and biological evaluation on cancer cell lines, in silico and in vitro , 2015, Medical Oncology.
[68] A. Lauria,et al. Kinase Inhibitors in Multitargeted Cancer Therapy. , 2017, Current medicinal chemistry.
[69] H. Tanabe,et al. A naturally occurring rexinoid, honokiol, can serve as a regulator of various retinoid x receptor heterodimers. , 2012, Biological & pharmaceutical bulletin.
[70] G. Lai,et al. Honokiol-induced apoptosis and autophagy in glioblastoma multiforme cells , 2013, Oncology letters.
[71] R. Chang,et al. Baicalin can scavenge peroxynitrite and ameliorate endogenous peroxynitrite-mediated neurotoxicity in cerebral ischemia-reperfusion injury. , 2013, Journal of ethnopharmacology.
[72] M S Mustafa,et al. Discovery of fifth serotype of dengue virus (DENV-5): A new public health dilemma in dengue control. , 2015, Medical journal, Armed Forces India.
[73] Pharmacopore hypothesis generation of BACE-1 inhibitors and pharmacophore-driven identification of potent multi-target neuroprotective agents , 2012, Medicinal Chemistry Research.
[74] Rona R. Ramsay,et al. A perspective on multi-target drug discovery and design for complex diseases , 2018, Clinical and Translational Medicine.
[75] Artem Cherkasov,et al. Best Practices of Computer-Aided Drug Discovery: Lessons Learned from the Development of a Preclinical Candidate for Prostate Cancer with a New Mechanism of Action , 2017, J. Chem. Inf. Model..
[76] Paola Brun,et al. Using the TOPS-MODE approach to fit multi-target QSAR models for tyrosine kinases inhibitors. , 2011, European journal of medicinal chemistry.
[77] In-silico Discovery and Simulated Selection of Multi-target Anti-HIV-1 Inhibitors , 2016 .
[78] Bruce Tidor,et al. Additivity in the analysis and design of HIV protease inhibitors. , 2009, Journal of medicinal chemistry.
[79] Barbara M. Bakker,et al. Naphthoquinone Derivatives Exert Their Antitrypanosomal Activity via a Multi-Target Mechanism , 2013, PLoS neglected tropical diseases.
[80] G. Rastelli,et al. Discovery of Multitarget Antivirals Acting on Both the Dengue Virus NS5-NS3 Interaction and the Host Src/Fyn Kinases. , 2015, Journal of medicinal chemistry.
[81] Anand Anbarasu,et al. Flavonoid from Carica papaya inhibits NS2B-NS3 protease and prevents Dengue 2 viral assembly , 2013, Bioinformation.
[82] Zhibin Li,et al. CS2164, a novel multi‐target inhibitor against tumor angiogenesis, mitosis and chronic inflammation with anti‐tumor potency , 2017, Cancer science.
[83] K. Shokat,et al. Escape from HER family tyrosine kinase inhibitor therapy by the kinase inactive HER3 , 2007, Nature.
[84] H. Bluyssen,et al. Identification of STAT1 and STAT3 Specific Inhibitors Using Comparative Virtual Screening and Docking Validation , 2015, PloS one.
[85] S. Sundar,et al. Advances in the treatment of leishmaniasis , 2002, Current opinion in infectious diseases.
[86] T. Efferth,et al. Cytotoxicity of the bisphenolic honokiol from Magnolia officinalis against multiple drug-resistant tumor cells as determined by pharmacogenomics and molecular docking. , 2014, Phytomedicine : international journal of phytotherapy and phytopharmacology.
[87] V. Pillay,et al. Multi-target therapeutics for neuropsychiatric and neurodegenerative disorders. , 2016, Drug discovery today.
[88] M. U. Mirza,et al. Structure-based virtual screening and molecular docking for the identification of potential multi-targeted inhibitors against breast cancer , 2017, Breast cancer.
[89] Yuzong Chen,et al. Discovery of benzimidazole derivatives as novel multi-target EGFR, VEGFR-2 and PDGFR kinase inhibitors. , 2011, Bioorganic & medicinal chemistry.
[90] A. Levine,et al. Surfing the p53 network , 2000, Nature.
[91] C. Sadasivan,et al. Designing of multi-target-directed ligands against the enzymes associated with neuroinflammation: an in silico approach , 2013 .
[92] M. Verdonk,et al. A comparison of physicochemical property profiles of marketed oral drugs and orally bioavailable anti-cancer protein kinase inhibitors in clinical development. , 2007, Current topics in medicinal chemistry.
[93] Matthew P. Repasky,et al. Extra precision glide: docking and scoring incorporating a model of hydrophobic enclosure for protein-ligand complexes. , 2006, Journal of medicinal chemistry.
[94] B. Dong,et al. Huperzine A for Alzheimer's disease. , 2008, The Cochrane database of systematic reviews.
[95] R. K. Gordon,et al. The NMDA receptor ion channel: a site for binding of huperzine A , 2001, Journal of applied toxicology : JAT.
[96] P. Lansbury. Back to the future: the 'old-fashioned' way to new medications for neurodegeneration , 2004, Nature Reviews Neuroscience.
[97] M. Berger,et al. Activity of the dual kinase inhibitor lapatinib (GW572016) against HER-2-overexpressing and trastuzumab-treated breast cancer cells. , 2006, Cancer research.
[98] Yuzong Chen,et al. Exploration of acridine scaffold as a potentially interesting scaffold for discovering novel multi-target VEGFR-2 and Src kinase inhibitors. , 2011, Bioorganic & medicinal chemistry.
[99] W. Chua,et al. Computational design of disulfide cyclic peptide as potential inhibitor of complex NS 2 BNS 3 dengue virus protease , 2012 .
[100] Takeshi Yamazaki,et al. Cheminformatics Modeling of Adverse Drug Responses by Clinically Relevant Mutants of Human Androgen Receptor , 2016, J. Chem. Inf. Model..
[101] Rui Wang,et al. Molecular dynamics simulations of interaction between protein-tyrosine phosphatase 1B and a bidentate inhibitor , 2006, Acta Pharmacologica Sinica.
[102] E. Coy-Barrera,et al. In-Silico Analyses of Sesquiterpene-Related Compounds on Selected Leishmania Enzyme-Based Targets , 2014, Molecules.