ATP hydrolysis catalyzed by human replication factor C requires participation of multiple subunits.

Human replication factor C (hRFC) is a five-subunit protein complex (p140, p40, p38, p37, and p36) that acts to catalytically load proliferating cell nuclear antigen onto DNA, where it recruits DNA polymerase delta or epsilon to the primer terminus at the expense of ATP, leading to processive DNA synthesis. We have previously shown that a subcomplex of hRFC consisting of three subunits (p40, p37, and p36) contained DNA-dependent ATPase activity. However, it is not clear which subunit(s) hydrolyzes ATP, as all five subunits include potential ATP binding sites. In this report, we introduced point mutations in the putative ATP-binding sequences of each hRFC subunit and examined the properties of the resulting mutant hRFC complex and the ATPase activity of the hRFC or the p40.p37.p36 complex. A mutation in any one of the ATP binding sites of the p36, p37, p40, or p140 subunits markedly reduced replication activity of the hRFC complex and the ATPase activity of the hRFC or the p40.p37.p36 complex. A mutation in the ATP binding site of the p38 subunit did not alter the replication activity of hRFC. These findings indicate that the replication activity of hRFC is dependent on efficient ATP hydrolysis contributed to by the action of four hRFC subunits.

[1]  E. Fanning,et al.  Functional Interactions among the Subunits of Replication Factor C Potentiate and Modulate Its ATPase Activity* , 1998, The Journal of Biological Chemistry.

[2]  B. Stillman,et al.  Reconstitution of Recombinant Human Replication Factor C (RFC) and Identification of an RFC Subcomplex Possessing DNA-dependent ATPase Activity* , 1998, The Journal of Biological Chemistry.

[3]  Jerard Hurwitz,et al.  A Complex Consisting of Human Replication Factor C p40, p37, and p36 Subunits Is a DNA-dependent ATPase and an Intermediate in the Assembly of the Holoenzyme* , 1997, The Journal of Biological Chemistry.

[4]  M. O’Donnell,et al.  Deletion Analysis of the Large Subunit p140 in Human Replication Factor C Reveals Regions Required for Complex Formation and Replication Activities* , 1997, The Journal of Biological Chemistry.

[5]  E. Fanning,et al.  Assembly of Functional Replication Factor C Expressed Using Recombinant Baculoviruses* , 1997, The Journal of Biological Chemistry.

[6]  Z. Jónsson,et al.  Replication Factor C Interacts with the C-terminal Side of Proliferating Cell Nuclear Antigen* , 1997, The Journal of Biological Chemistry.

[7]  P. Burgers,et al.  Overproduction and Affinity Purification of Saccharomyces cerevisiae Replication Factor C* , 1997, The Journal of Biological Chemistry.

[8]  Z. Kelman,et al.  Dynamics of Loading the β Sliding Clamp of DNA Polymerase III onto DNA* , 1996, The Journal of Biological Chemistry.

[9]  L. Bird,et al.  Crystal structure of a DExx box DNA helicase , 1996, Nature.

[10]  M. O’Donnell,et al.  Reconstitution of human replication factor C from its five subunits in baculovirus-infected insect cells. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[11]  G. Maga,et al.  A conserved domain of the large subunit of replication factor C binds PCNA and acts like a dominant negative inhibitor of DNA replication in mammalian cells. , 1996, The EMBO journal.

[12]  M. O’Donnell,et al.  In vitro reconstitution of human replication factor C from its five subunits. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[13]  R. Kobayashi,et al.  Characterization of the five replication factor C genes of Saccharomyces cerevisiae , 1995, Molecular and cellular biology.

[14]  C. Sander,et al.  Investigating the structural determinants of the p21-like triphosphate and Mg2+ binding site. , 1995, Journal of molecular biology.

[15]  M. O’Donnell,et al.  Assembly of a Chromosomal Replication Machine: Two DNA Polymerases, a Clamp Loader, and Sliding Clamps in One Holoenzyme Particle. I. ORGANIZATION OF THE CLAMP LOADER (*) , 1995, The Journal of Biological Chemistry.

[16]  M. O’Donnell,et al.  Assembly of a Chromosomal Replication Machine: Two DNA Polymerases, a Clamp Loader, and Sliding Clamps in One Holoenzyme Particle. , 1995, The Journal of Biological Chemistry.

[17]  Jan Pieter Abrahams,et al.  Structure at 2.8 Â resolution of F1-ATPase from bovine heart mitochondria , 1994, Nature.

[18]  D. Mueller,et al.  Primary structural constraints of P-loop of mitochondrial F1-ATPase from yeast. , 1994, The Journal of biological chemistry.

[19]  Z. Kelman,et al.  DNA replication: enzymology and mechanisms. , 1994, Current opinion in genetics & development.

[20]  U. Hübscher,et al.  Calf thymus RF-C as an essential component for DNA polymerase δ and ε holoenzymes function , 1992 .

[21]  N. Sonenberg,et al.  Mutational analysis of a DEAD box RNA helicase: the mammalian translation initiation factor eIF‐4A. , 1992, The EMBO journal.

[22]  J. Hurwitz,et al.  Sequence and expression in Escherichia coli of the 40-kDa subunit of activator 1 (replication factor C) of HeLa cells. , 1992, Proceedings of the National Academy of Sciences of the United States of America.

[23]  G. Schulz Binding of nucleotides by proteins , 1992, Current Biology.

[24]  T. Steitz,et al.  Structure of the recA protein–ADP complex , 1992, Nature.

[25]  B. Stillman,et al.  Identification of replication factor C from Saccharomyces cerevisiae: a component of the leading-strand DNA replication complex , 1992, Molecular and cellular biology.

[26]  P. Burgers,et al.  Saccharomyces cerevisiae replication factor C. I. Purification and characterization of its ATPase activity. , 1991, The Journal of biological chemistry.

[27]  B. Stillman,et al.  Replication factors required for SV40 DNA replication in vitro. I. DNA structure-specific recognition of a primer-template junction by eukaryotic DNA polymerases and their accessory proteins. , 1991, The Journal of biological chemistry.

[28]  Frank McCormick,et al.  The GTPase superfamily: conserved structure and molecular mechanism , 1991, Nature.

[29]  B. Stillman,et al.  Functions of replication factor C and proliferating-cell nuclear antigen: functional similarity of DNA polymerase accessory proteins from human cells and bacteriophage T4. , 1990, Proceedings of the National Academy of Sciences of the United States of America.

[30]  J. Hurwitz,et al.  Multiple functions of human single-stranded-DNA binding protein in simian virus 40 DNA replication: single-strand stabilization and stimulation of DNA polymerases alpha and delta. , 1989, Proceedings of the National Academy of Sciences of the United States of America.

[31]  J. Hurwitz,et al.  Synthesis of DNA containing the simian virus 40 origin of replication by the combined action of DNA polymerases alpha and delta. , 1989, Proceedings of the National Academy of Sciences of the United States of America.

[32]  L. Grossman,et al.  Mutations in the Escherichia coli UvrB ATPase motif compromise excision repair capacity. , 1989, Proceedings of the National Academy of Sciences of the United States of America.

[33]  K. Williams,et al.  The 44P subunit of the T4 DNA polymerase accessory protein complex catalyzes ATP hydrolysis. , 1989, The Journal of biological chemistry.

[34]  S. Ho,et al.  Site-directed mutagenesis by overlap extension using the polymerase chain reaction. , 1989, Gene.

[35]  B. Stillman,et al.  Purification of a cellular replication factor, RF-C, that is required for coordinated synthesis of leading and lagging strands during simian virus 40 DNA replication in vitro , 1989, Molecular and cellular biology.

[36]  J. Walker,et al.  Distantly related sequences in the alpha‐ and beta‐subunits of ATP synthase, myosin, kinases and other ATP‐requiring enzymes and a common nucleotide binding fold. , 1982, The EMBO journal.

[37]  J. Hurwitz,et al.  The subunits of activator 1 (replication factor C) carry out multiple functions essential for proliferating-cell nuclear antigen-dependent DNA synthesis. , 1993, Proceedings of the National Academy of Sciences of the United States of America.