Complete Genome Sequence of Bordetella pertussis Pelita III, the Production Strain for an Indonesian Whole-Cell Pertussis Vaccine

ABSTRACT PT Bio Farma, the sole World Health Organization-approved Indonesian vaccine producer, manufactures a whole-cell whooping cough vaccine (wP) that, as part of a pentavalent diphtheria-tetanus-pertussis/hepatitis B/Haemophilus influenzae b (DTP/HB/Hib) vaccine, is used in Indonesia and many other countries. We report here the whole-genome sequence for Bordetella pertussis Pelita III, PT Bio Farma’s wP production strain.

[1]  Eric P. Nawrocki,et al.  NCBI prokaryotic genome annotation pipeline , 2016, Nucleic acids research.

[2]  Lori Rowe,et al.  Genome Structural Diversity among 31 Bordetella pertussis Isolates from Two Recent U.S. Whooping Cough Statewide Epidemics , 2016, mSphere.

[3]  P. Kilgore,et al.  Pertussis: Microbiology, Disease, Treatment, and Prevention , 2016, Clinical Microbiology Reviews.

[4]  Aaron A. Klammer,et al.  Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data , 2013, Nature Methods.

[5]  Peter Williams,et al.  IMG: the integrated microbial genomes database and comparative analysis system , 2011, Nucleic Acids Res..

[6]  Florent E. Angly,et al.  Next Generation Sequence Assembly with AMOS , 2011, Current protocols in bioinformatics.

[7]  V. Caro,et al.  Is the Sequenced Bordetella pertussis Strain Tohama I Representative of the Species? , 2008, Journal of Clinical Microbiology.

[8]  Y. Arakawa,et al.  Antigenic variation in Bordetella pertussis isolates recovered from adults and children in Japan. , 2008, Vaccine.

[9]  F. Mooi,et al.  Comparative Genomics of Bordetella pertussis Reveals Progressive Gene Loss in Finnish Strains , 2007, PloS one.

[10]  Mihai Pop,et al.  Minimus: a fast, lightweight genome assembler , 2007, BMC Bioinformatics.

[11]  B. Barrell,et al.  Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica , 2003, Nature Genetics.

[12]  Y. Nakase,et al.  Studies on Haemophilus pertussis. II. Resistance of each antigen to heat, alcohol and HCI. , 1953, The Kitasato archives of experimental medicine.