Software Packages for Bayesian Multilevel Modeling
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[1] Radford M. Neal. Probabilistic Inference Using Markov Chain Monte Carlo Methods , 2011 .
[2] Kesheng Wang. Linear and Non-Linear Mixed Models in Longitudinal Studies and Complex Survey Data , 2016 .
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[21] Paul-Christian Bürkner,et al. brms: An R Package for Bayesian Multilevel Models Using Stan , 2017 .
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[23] Bob Carpenter,et al. Fitting Bayesian item response models in Stata and Stan , 2016, 1601.03443.
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[25] Tal Yarkoni,et al. Bambi: A simple interface for fitting Bayesian mixed effects models , 2016 .
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[27] Emmanuel Lesaffre,et al. Generalized linear mixed model with a penalized Gaussian mixture as a random effects distribution , 2008, Comput. Stat. Data Anal..
[28] Patrick Brown,et al. MCMC for Generalized Linear Mixed Models with glmmBUGS , 2010, R J..
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[30] Bengt Muthén,et al. Bayesian Analysis Using Mplus: Technical Implementation , 2010 .
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[33] Deborah Burr,et al. bspmma: An R Package for Bayesian Semiparametric Models for Meta-Analysis , 2012 .
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[35] Virgilio Gómez-Rubio,et al. Markov chain Monte Carlo with the Integrated Nested Laplace Approximation , 2017, Stat. Comput..
[36] Andrew D. Martin,et al. MCMCpack: Markov chain Monte Carlo in R , 2011 .
[37] Rutger van Haasteren,et al. Gibbs Sampling , 2010, Encyclopedia of Machine Learning.
[38] Ke Sheng Wang,et al. Linear and Non-Linear Mixed Models in Longitudinal Studies andComplex Survey Data , 2016 .
[39] Bob Carpenter,et al. Introducing the StataStan Interface for Fast, Complex Bayesian Modeling Using Stan , 2017 .
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[41] John R. Nesselroade,et al. Bayesian analysis of longitudinal data using growth curve models , 2007 .
[42] Achim Zeileis,et al. Structured Additive Regression Models: An R Interface to BayesX , 2015 .
[43] Radford M. Neal. Slice Sampling , 2003, The Annals of Statistics.
[44] S. Walker. Invited comment on the paper "Slice Sampling" by Radford Neal , 2003 .
[45] Henrik Holmberg,et al. Generalized linear models with clustered data: Fixed and random effects models , 2011, Comput. Stat. Data Anal..
[46] Brady T West,et al. An Overview of Current Software Procedures for Fitting Linear Mixed Models , 2011, The American statistician.
[47] Martyn Plummer,et al. JAGS Version 3.3.0 user manual , 2012 .
[48] Penny Whiting,et al. Metandi: Meta-analysis of Diagnostic Accuracy Using Hierarchical Logistic Regression , 2009 .
[49] Bengt Muthén,et al. Bayesian Analysis Using Mplus , 2010 .
[50] George Karabatsos,et al. A menu-driven software package of Bayesian nonparametric (and parametric) mixed models for regression analysis and density estimation , 2015, Behavior Research Methods.
[51] Jonathan Aguero-Valverde,et al. Full Bayes Poisson gamma, Poisson lognormal, and zero inflated random effects models: Comparing the precision of crash frequency estimates. , 2013, Accident; analysis and prevention.
[52] S. Chib,et al. Understanding the Metropolis-Hastings Algorithm , 1995 .
[53] Haavard Rue,et al. Bayesian Computing with INLA: A Review , 2016, 1604.00860.
[54] Bradley P. Carlin,et al. Bayesian measures of model complexity and fit , 2002 .
[55] Simon G Thompson,et al. Flexible parametric models for random‐effects distributions , 2008, Statistics in medicine.
[56] Jean-Noël Bacro,et al. A Hierarchical Bayesian Model for Spatial Prediction of Multivariate Non‐Gaussian Random Fields , 2011, Biometrics.
[57] Jean-Paul Fox,et al. Multilevel IRT Modeling in Practice with the Package mlirt , 2007 .
[58] Jarrod Had. MCMC Methods for Multi-Response Generalized Linear Mixed Models: The MCMCglmm R Package , 2010 .
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[60] Finn Lindgren,et al. Bayesian Spatial Modelling with R-INLA , 2015 .
[61] Christopher M J Charlton,et al. runmlwin : A Program to Run the MLwiN Multilevel Modeling Software from within Stata , 2013 .
[62] P. Austin. A Tutorial on Multilevel Survival Analysis: Methods, Models and Applications , 2017, International statistical review = Revue internationale de statistique.
[63] Peter Müller,et al. DPpackage: Bayesian Semi- and Nonparametric Modeling in R , 2011 .
[64] Virgilio G'omez-Rubio,et al. Spatial Models with the Integrated Nested Laplace Approximation within Markov Chain Monte Carlo , 2017, 1702.03891.
[65] D. Bates,et al. Fitting Linear Mixed-Effects Models Using lme4 , 2014, 1406.5823.
[66] N. G. Best,et al. WinBUGS User Manual: Version 1.4 , 2001 .
[67] B. Byrne. Book Review: Structural Equation Modeling with EQS and EQS/Windows: Basic Concepts, Applications, and Programming , 1994 .
[68] A B Lawson,et al. Comparing INLA and OpenBUGS for hierarchical Poisson modeling in disease mapping. , 2015, Spatial and spatio-temporal epidemiology.
[69] H. Rue,et al. Approximate Bayesian inference for latent Gaussian models by using integrated nested Laplace approximations , 2009 .