Pak 1 Protein Kinase Regulates Activation and Nuclear Localization of Snf 1-Gal 83 Protein Kinase

Three kinases, Pak1, Tos3, and Elm1, activate Snf1 protein kinase in Saccharomyces cerevisiae. This cascade is conserved in mammals, where LKB1 activates AMP-activated protein kinase. We address the specificity of the activating kinases for the three forms of Snf1 protein kinase containing the -subunit isoforms Gal83, Sip1, and Sip2. Pak1 is the most important kinase for activating Snf1-Gal83 in response to glucose limitation, but Elm1 also has a significant role; moreover, both Pak1 and Elm1 affect Snf1-Sip2. These findings exclude the possibility of a one-to-one correspondence between the activating kinases and the Snf1 complexes. We further identify a second, unexpected role for Pak1 in regulating Snf1-Gal83: the catalytic activity of Pak1 is required for the nuclear enrichment of Snf1-Gal83 in response to carbon stress. The nuclear enrichment of Snf1 fused to green fluorescent protein (GFP) depends on both Gal83 and Pak1 and is abolished by a mutation of the activation loop threonine; in contrast, the nuclear enrichment of Gal83-GFP occurs in a snf1 mutant and depends on Pak1 only when Snf1 is present. Snf1-Gal83 is the only form of the kinase that localizes to the nucleus. These findings, that Pak1 both activates Snf1-Gal83 and controls its nuclear localization, implicate Pak1 in regulating nuclear Snf1 protein kinase activity.

[1]  J. Gancedo Yeast Carbon Catabolite Repression , 1998, Microbiology and Molecular Biology Reviews.

[2]  R. McCartney,et al.  Regulation of Snf1 Kinase , 2001, The Journal of Biological Chemistry.

[3]  Jérôme Boudeau,et al.  Complexes between the LKB1 tumor suppressor, STRADα/β and MO25α/β are upstream kinases in the AMP-activated protein kinase cascade , 2003, Journal of biology.

[4]  M. Carlson,et al.  Glucose-regulated interaction of a regulatory subunit of protein phosphatase 1 with the Snf1 protein kinase in Saccharomyces cerevisiae. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[5]  J. Scott,et al.  Yeast SNF1 is functionally related to mammalian AMP-activated protein kinase and regulates acetyl-CoA carboxylase in vivo. , 1994, The Journal of biological chemistry.

[6]  Valmik K. Vyas,et al.  Snf1 Protein Kinase and the Repressors Nrg1 and Nrg2 Regulate FLO11, Haploid Invasive Growth, and Diploid Pseudohyphal Differentiation , 2002, Molecular and Cellular Biology.

[7]  David Carling,et al.  Activation of yeast Snf1 and mammalian AMP-activated protein kinase by upstream kinases , 2003, Proceedings of the National Academy of Sciences of the United States of America.

[8]  David W. Russell,et al.  Rapid and Efficient Site-directed Mutagenesis by the Single-tube Megaprimer PCR Method. , 2006, CSH protocols.

[9]  R. McCartney,et al.  β‐subunits of Snf1 kinase are required for kinase function and substrate definition , 2000, The EMBO journal.

[10]  Fred Winston,et al.  Methods in Yeast Genetics: A Laboratory Course Manual , 1990 .

[11]  R. McCartney,et al.  Yeast Pak1 Kinase Associates with and Activates Snf1 , 2003, Molecular and Cellular Biology.

[12]  D. Hardie,et al.  Glucose repression/derepression in budding yeast: SNF1 protein kinase is activated by phosphorylation under derepressing conditions, and this correlates with a high AMP:ATP ratio , 1996, Current Biology.

[13]  D. Carling,et al.  Tissue distribution of the AMP-activated protein kinase, and lack of activation by cyclic-AMP-dependent protein kinase, studied using a specific and sensitive peptide assay. , 1989, European journal of biochemistry.

[14]  J. Gordon,et al.  Enhanced Gluconeogenesis and Increased Energy Storage as Hallmarks of Aging in Saccharomyces cerevisiae * 210 , 2001, The Journal of Biological Chemistry.

[15]  Margaret S. Wu,et al.  Role of AMP-activated protein kinase in mechanism of metformin action. , 2001, The Journal of clinical investigation.

[16]  P J Cullen,et al.  Glucose depletion causes haploid invasive growth in yeast. , 2000, Proceedings of the National Academy of Sciences of the United States of America.

[17]  M. Carlson,et al.  Subcellular localization of the Snf1 kinase is regulated by specific beta subunits and a novel glucose signaling mechanism. , 2001, Genes & development.

[18]  M. Carlson,et al.  A yeast gene that is essential for release from glucose repression encodes a protein kinase. , 1986, Science.

[19]  S. Uchida,et al.  Adiponectin stimulates glucose utilization and fatty-acid oxidation by activating AMP-activated protein kinase , 2002, Nature Medicine.

[20]  Timothy A. J. Haystead,et al.  Regulatory Interactions between the Reg1-Glc7 Protein Phosphatase and the Snf1 Protein Kinase , 2000, Molecular and Cellular Biology.

[21]  Young-Bum Kim,et al.  Leptin stimulates fatty-acid oxidation by activating AMP-activated protein kinase , 2002, Nature.

[22]  Seung-Pyo Hong,et al.  Std1p (Msn3p) positively regulates the Snf1 kinase in Saccharomyces cerevisiae. , 2003, Genetics.

[23]  David Carling,et al.  Supplemental Data LKB 1 Is the Upstream Kinase in the AMP-Activated Protein Kinase Cascade , 2003 .

[24]  J. Gordon,et al.  Sip2p and its partner snf1p kinase affect aging in S. cerevisiae. , 2000, Genes & development.

[25]  M. Carlson,et al.  Srb/mediator proteins interact functionally and physically with transcriptional repressor Sfl1 , 1998, The EMBO journal.

[26]  Valmik K. Vyas,et al.  Snf1 Kinases with Different β-Subunit Isoforms Play Distinct Roles in Regulating Haploid Invasive Growth , 2003, Molecular and Cellular Biology.

[27]  M. Carlson,et al.  N-terminal mutations modulate yeast SNF1 protein kinase function. , 1992, Genetics.

[28]  M. Carlson,et al.  Gal83 mediates the interaction of the Snf1 kinase complex with the transcription activator Sip4 , 1999, The EMBO journal.

[29]  M. Carlson,et al.  Cyclic AMP-Dependent Protein Kinase Regulates the Subcellular Localization of Snf1-Sip1 Protein Kinase , 2004, Molecular and Cellular Biology.

[30]  B. Kemp,et al.  Mutations in the Gal83 Glycogen-Binding Domain Activate the Snf1/Gal83 Kinase Pathway by a Glycogen-Independent Mechanism , 2004, Molecular and Cellular Biology.

[31]  D. Hardie,et al.  Elm1p Is One of Three Upstream Kinases for the Saccharomyces cerevisiae SNF1 Complex , 2003, Current Biology.

[32]  M. Carlson,et al.  Glucose repression in yeast. , 1999, Current opinion in microbiology.

[33]  M. Carlson,et al.  Sip4, a Snf1 kinase‐dependent transcriptional activator, binds to the carbon source‐responsive element of gluconeogenic genes , 1998, The EMBO journal.

[34]  J. François,et al.  Reserve carbohydrates metabolism in the yeast Saccharomyces cerevisiae. , 2001, FEMS microbiology reviews.

[35]  H. Schüller,et al.  Deregulation of gluconeogenic structural genes by variants of the transcriptional activator Cat8p of the yeast Saccharomyces cerevisiae , 1999, Molecular microbiology.

[36]  D J Campbell,et al.  AMP-activated protein kinase, super metabolic regulator. , 2001, Biochemical Society transactions.

[37]  M. Carlson,et al.  Glucose regulates protein interactions within the yeast SNF1 protein kinase complex. , 1996, Genes & development.

[38]  E. Madison,et al.  Rapid and efficient site-directed mutagenesis by single-tube ‘megaprimer’ PCR method , 1997 .

[39]  Yi Li,et al.  Generating yeast transcriptional activators containing no yeast protein sequences , 1991, Nature.

[40]  M. Carlson,et al.  A family of proteins containing a conserved domain that mediates interaction with the yeast SNF1 protein kinase complex. , 1994, The EMBO journal.

[41]  Simon C Watkins,et al.  Std1 and Mth1 Proteins Interact with the Glucose Sensors To Control Glucose-Regulated Gene Expression in Saccharomyces cerevisiae , 1999, Molecular and Cellular Biology.

[42]  M. Carlson,et al.  A regulatory shortcut between the Snf1 protein kinase and RNA polymerase II holoenzyme. , 2000, Proceedings of the National Academy of Sciences of the United States of America.

[43]  M. Carlson,et al.  The AMP-activated/SNF1 protein kinase subfamily: metabolic sensors of the eukaryotic cell? , 1998, Annual review of biochemistry.

[44]  E. O’Shea,et al.  Global analysis of protein expression in yeast , 2003, Nature.

[45]  Rodney Rothstein,et al.  Elevated recombination rates in transcriptionally active DNA , 1989, Cell.