K63-linked polyubiquitination of transcription factor IRF1 is essential for IL-1-induced production of chemokines CXCL10 and CCL5

Although interleukin 1 (IL-1) induces expression of the transcription factor IRF1 (interferon-regulatory factor 1), the roles of IRF1 in immune and inflammatory responses and mechanisms of its activation remain elusive. Here we found that IRF1 was essential for IL-1-induced expression of the chemokines CXCL10 and CCL5, which recruit mononuclear cells into sites of sterile inflammation. Newly synthesized IRF1 acquired Lys63 (K63)-linked polyubiquitination mediated by the apoptosis inhibitor cIAP2 that was enhanced by the bioactive lipid S1P. In response to IL-1, cIAP2 and the sphingosine kinase SphK1 (the enzyme that generates S1P) formed a complex with IRF1, which led to its activation. Thus, IL-1 triggered a hitherto unknown signaling cascade that controlled the induction of IRF1-dependent genes that encode molecules important for sterile inflammation.

[1]  H. Ruffner,et al.  Mice devoid of interferon regulatory factor 1 (IRF‐1) show normal expression of type I interferon genes. , 1994, The EMBO journal.

[2]  V. Landré,et al.  Docking-dependent Ubiquitination of the Interferon Regulatory Factor-1 Tumor Suppressor Protein by the Ubiquitin Ligase CHIP* , 2010, The Journal of Biological Chemistry.

[3]  C. Trautwein,et al.  Cytokine regulation of pro- and anti-apoptotic genes in rat hepatocytes: NF-kappaB-regulated inhibitor of apoptosis protein 2 (cIAP2) prevents apoptosis. , 2002, Journal of hepatology.

[4]  Patrick G. A. Pedrioli,et al.  Activation of the canonical IKK complex by K63/M1-linked hybrid ubiquitin chains , 2013, Proceedings of the National Academy of Sciences.

[5]  M. Diamond,et al.  Induction of IFN-β and the Innate Antiviral Response in Myeloid Cells Occurs through an IPS-1-Dependent Signal That Does Not Require IRF-3 and IRF-7 , 2009, PLoS pathogens.

[6]  Zhijian J. Chen,et al.  Activation of the IκB Kinase Complex by TRAF6 Requires a Dimeric Ubiquitin-Conjugating Enzyme Complex and a Unique Polyubiquitin Chain , 2000, Cell.

[7]  G. Stark,et al.  Roles of IKK-beta, IRF1, and p65 in the activation of chemokine genes by interferon-gamma. , 2009, Journal of interferon & cytokine research : the official journal of the International Society for Interferon and Cytokine Research.

[8]  Zhijian J. Chen,et al.  Key role of Ubc5 and lysine-63 polyubiquitination in viral activation of IRF3. , 2009, Molecular cell.

[9]  T. Mak,et al.  Activation of noncanonical NF-κB requires coordinated assembly of a regulatory complex of the adaptors cIAP1, cIAP2, TRAF2, TRAF3 and the kinase NIK , 2008, Nature Immunology.

[10]  J. Minna,et al.  Autocrine TNFalpha signaling renders human cancer cells susceptible to Smac-mimetic-induced apoptosis. , 2007, Cancer cell.

[11]  C. Dinarello,et al.  Immunological and inflammatory functions of the interleukin-1 family. , 2009, Annual review of immunology.

[12]  K. Ozato,et al.  Synergistic Activation of Interleukin-12 p35 Gene Transcription by Interferon Regulatory Factor-1 and Interferon Consensus Sequence-binding Protein* , 2004, Journal of Biological Chemistry.

[13]  J. Pagano,et al.  TRAF6 and the Three C-Terminal Lysine Sites on IRF7 Are Required for Its Ubiquitination-Mediated Activation by the Tumor Necrosis Factor Receptor Family Member Latent Membrane Protein 1 , 2008, Molecular and Cellular Biology.

[14]  Cheng Luo,et al.  SPHINGOSINE-1-PHOSPHATE: A MISSING COFACTOR FOR THE E3 UBIQUITIN LIGASE TRAF2 , 2010, Nature.

[15]  Zhaodan Cao,et al.  TRAF6 is a signal transducer for interleukin-1 , 1996, Nature.

[16]  L. Ivashkiv,et al.  TNF activates an IRF1-dependent autocrine loop leading to sustained expression of chemokines and STAT1-dependent type I interferon–response genes , 2008, Nature Immunology.

[17]  T. Mak,et al.  Reduced Incidence and Severity of Antigen-induced Autoimmune Diseases in Mice Lacking Interferon Regulatory Factor-1 , 1997, The Journal of experimental medicine.

[18]  Hao Wu,et al.  Crystal structures of the TRAF2: cIAP2 and the TRAF1: TRAF2: cIAP2 complexes: affinity, specificity, and regulation. , 2010, Molecular cell.

[19]  T. Kaisho,et al.  Cutting Edge: Critical Role of IκB Kinase α in TLR7/9-Induced Type I IFN Production by Conventional Dendritic Cells , 2010, The Journal of Immunology.

[20]  S. Akira,et al.  Two Mechanistically and Temporally Distinct NF-κB Activation Pathways in IL-1 Signaling , 2009, Science Signaling.

[21]  C. Dinarello Anti-inflammatory Agents: Present and Future , 2010, Cell.

[22]  K. Harikumar,et al.  Extracellular and intracellular sphingosine-1-phosphate in cancer , 2011, Cancer and Metastasis Reviews.

[23]  R. Cabeza,et al.  Present and Future , 2008 .

[24]  G. Sen,et al.  A critical role for IRAK4 kinase activity in Toll-like receptor–mediated innate immunity , 2007, The Journal of experimental medicine.

[25]  Zhijian J. Chen Ubiquitin signalling in the NF-κB pathway , 2005, Nature Cell Biology.

[26]  Graham F. Brady,et al.  Enhanced Cytoprotective Effects of the Inhibitor of Apoptosis Protein Cellular IAP1 through Stabilization with TRAF2* , 2009, The Journal of Biological Chemistry.

[27]  J M Thornton,et al.  LIGPLOT: a program to generate schematic diagrams of protein-ligand interactions. , 1995, Protein engineering.

[28]  S. Akira,et al.  Lipopolysaccharide Stimulates the MyD88-Independent Pathway and Results in Activation of IFN-Regulatory Factor 3 and the Expression of a Subset of Lipopolysaccharide-Inducible Genes1 , 2001, The Journal of Immunology.

[29]  J. Ashwell,et al.  Lys63-Linked Polyubiquitination of IRAK-1 Is Required for Interleukin-1 Receptor- and Toll-Like Receptor-Mediated NF-κB Activation , 2008, Molecular and Cellular Biology.

[30]  Yuzhi Zhang,et al.  Endothelial TNF receptor 2 induces IRF1 transcription factor-dependent interferon-β autocrine signaling to promote monocyte recruitment. , 2013, Immunity.

[31]  J. Inoue,et al.  Characteristics and biological functions of TRAF6. , 2007, Advances in experimental medicine and biology.

[32]  Cheng Luo,et al.  Regulation of Histone Acetylation in the Nucleus by Sphingosine-1-Phosphate , 2009, Science.

[33]  J. Hiscott Convergence of the NF-kappaB and IRF pathways in the regulation of the innate antiviral response. , 2007, Cytokine & growth factor reviews.

[34]  Eugenia G. Giannopoulou,et al.  Synergistic activation of inflammatory cytokine genes by interferon-γ-induced chromatin remodeling and toll-like receptor signaling. , 2013, Immunity.

[35]  泉 佐々木 Critical role of IκB kinase α in TLR7/9-induced type 1 IFN production by conventional dendritic cells , 2011 .

[36]  Zhijian J. Chen,et al.  TAK1 is a ubiquitin-dependent kinase of MKK and IKK , 2001, Nature.

[37]  W. Arend The balance between IL-1 and IL-1Ra in disease. , 2002, Cytokine & growth factor reviews.

[38]  David S. Goodsell,et al.  Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function , 1998, J. Comput. Chem..

[39]  Barbara S. Paugh,et al.  A selective sphingosine kinase 1 inhibitor integrates multiple molecular therapeutic targets in human leukemia. , 2008, Blood.

[40]  T. Maniatis,et al.  IKKε and TBK1 are essential components of the IRF3 signaling pathway , 2003, Nature Immunology.

[41]  Functional Regulation of MyD88-Activated Interferon Regulatory Factor 5 by K63-Linked Polyubiquitination , 2008, Molecular and Cellular Biology.

[42]  J. Hiscott,et al.  Essential Role of Interferon Regulatory Factor 3 in Direct Activation of RANTES Chemokine Transcription , 1999, Molecular and Cellular Biology.

[43]  T. Taniguchi,et al.  The interferon regulatory transcription factor IRF-1 controls positive and negative selection of CD8+ thymocytes. , 1997, Immunity.

[44]  S. Janssens,et al.  A universal role for MyD88 in TLR/IL-1R-mediated signaling. , 2002, Trends in biochemical sciences.

[45]  L. O’Neill,et al.  The interleukin‐1 receptor/Toll‐like receptor superfamily: 10 years of progress , 2008, Immunological reviews.

[46]  M. Diamond,et al.  Interferon Regulatory Factor-1 (IRF-1) Shapes Both Innate and CD8+ T Cell Immune Responses against West Nile Virus Infection , 2011, PLoS pathogens.

[47]  M. Maceyka,et al.  Role of Sphingosine Kinase 2 in Cell Migration toward Epidermal Growth Factor* , 2005, Journal of Biological Chemistry.

[48]  G. Dittmar,et al.  A cytoplasmic ATM-TRAF6-cIAP1 module links nuclear DNA damage signaling to ubiquitin-mediated NF-κB activation. , 2010, Molecular cell.

[49]  Hiroshi Takayanagi,et al.  Evidence for licensing of IFN-γ-induced IFN regulatory factor 1 transcription factor by MyD88 in Toll-like receptor-dependent gene induction program , 2006, Proceedings of the National Academy of Sciences.

[50]  L. Leon,et al.  IL-1 type I receptor mediates acute phase response to turpentine, but not lipopolysaccharide, in mice. , 1996, The American journal of physiology.

[51]  P. Heinrich,et al.  Oncostatin M and the Interleukin-6 and Soluble Interleukin-6 Receptor Complex Regulate α1-Antichymotrypsin Expression in Human Cortical Astrocytes* , 1998, The Journal of Biological Chemistry.

[52]  M. Vadas,et al.  Activation of sphingosine kinase 1 by ERK1/2‐mediated phosphorylation , 2003, The EMBO journal.