Dual species transcript profiling during the interaction between banana (Musa acuminata) and the fungal pathogen Fusarium oxysporum f. sp. cubense

[1]  A. Glenn,et al.  Characterization of two catalase-peroxidase-encoding genes in Fusarium verticillioides reveals differential responses to in vitro versus in planta oxidative challenges. , 2018, Molecular plant pathology.

[2]  M. Zander,et al.  Investigation of the diversity of effector genes in the banana pathogen, Fusarium oxysporum f. sp. cubense, reveals evidence of horizontal gene transfer. , 2018, Molecular plant pathology.

[3]  Wenbin Li,et al.  Long noncoding RNAs that respond to Fusarium oxysporum infection in ‘Cavendish’ banana (Musa acuminata) , 2017, Scientific Reports.

[4]  G. Shaw,et al.  Cytochrome c as a Peroxidase: Activation of the Precatalytic Native State by H2O2-Induced Covalent Modifications. , 2017, Journal of the American Chemical Society.

[5]  M. Mariotti,et al.  Cytochrome c peroxidase facilitates the beneficial use of H2O2 in prokaryotes , 2017, Proceedings of the National Academy of Sciences.

[6]  K. Acharya,et al.  Biochemical basis of improvement of defense in tomato plant against Fusarium wilt by CaCl2 , 2017, Physiology and Molecular Biology of Plants.

[7]  D. Burgess.  Gene expression: Host–pathogen duels revealed by dual RNA-seq in vivo , 2017, Nature Reviews Genetics.

[8]  Wenbin Li,et al.  Metabolomic, Biochemical, and Gene Expression Analyses Reveal the Underlying Responses of Resistant and Susceptible Banana Species during Early Infection with Fusarium oxysporum f. sp. cubense. , 2017, Plant disease.

[9]  R. Ploetz.  Fusarium Wilt of Banana. , 2015, Phytopathology.

[10]  B. Xie,et al.  Identification of a class of CFEM proteins containing a new conserved motif in Fusarium oxysporum , 2015 .

[11]  A. English,et al.  Respiration triggers heme transfer from cytochrome c peroxidase to catalase in yeast mitochondria , 2014, Proceedings of the National Academy of Sciences.

[12]  X. Fang,et al.  Genome and Transcriptome Analysis of the Fungal Pathogen Fusarium oxysporum f. sp. cubense Causing Banana Vascular Wilt Disease , 2014, PloS one.

[13]  Yutaka Sato,et al.  Salicylic acid antagonizes abscisic acid inhibition of shoot growth and cell cycle progression in rice , 2014, Scientific Reports.

[14]  P. Mieczkowski,et al.  High-Resolution Transcript Profiling of the Atypical Biotrophic Interaction between Theobroma cacao and the Fungal Pathogen Moniliophthora perniciosa[C][W][OPEN] , 2013, Plant Cell.

[15]  D. Guo,et al.  Analysis of banana transcriptome and global gene expression profiles in banana roots in response to infection by race 1 and tropical race 4 of Fusarium oxysporum f. sp. cubense , 2013, BMC Genomics.

[16]  D. Guo,et al.  Analysis of banana transcriptome and global gene expression profiles in banana roots in response to infection by race 1 and tropical race 4 of Fusarium oxysporum f. sp. cubense , 2013, BMC Genomics.

[17]  A. English,et al.  Cytochrome c peroxidase is a mitochondrial heme-based H2O2 sensor that modulates antioxidant defense. , 2013, Free radical biology & medicine.

[18]  Ling Zhou,et al.  Transcriptome and Expression Profile Analysis of Highly Resistant and Susceptible Banana Roots Challenged with Fusarium oxysporum f. sp. cubense Tropical Race 4 , 2013, PloS one.

[19]  J. Xu,et al.  Abscisic Acid Promotes Susceptibility to the Rice Leaf Blight Pathogen Xanthomonas oryzae pv oryzae by Suppressing Salicylic Acid-Mediated Defenses , 2013, PloS one.

[20]  Zhiqiang Jin,et al.  De Novo characterization of the banana root transcriptome and analysis of gene expression under Fusarium oxysporum f. sp. Cubense tropical race 4 infection , 2012, BMC Genomics.

[21]  Jongsun Park,et al.  Systematic and searchable classification of cytochrome P450 proteins encoded by fungal and oomycete genomes , 2012, BMC Genomics.

[22]  A. Westermann,et al.  Dual RNA-seq of pathogen and host , 2012, Nature Reviews Microbiology.

[23]  C. Zuo,et al.  Transcriptome profiling of resistant and susceptible Cavendish banana roots following inoculation with Fusarium oxysporum f. sp. cubense tropical race 4 , 2012, BMC Genomics.

[24]  J. Thaler,et al.  Evolution of jasmonate and salicylate signal crosstalk. , 2012, Trends in plant science.

[25]  E. Aitken,et al.  Presence of putative pathogenicity genes in isolates of Fusarium oxysporum f. sp. cubense from Australia , 2012, Australasian Plant Pathology.

[26]  Murray Grant,et al.  Hormone crosstalk in plant disease and defense: more than just jasmonate-salicylate antagonism. , 2011, Annual review of phytopathology.

[27]  F. Gozzo,et al.  Clonostachys rosea BAFC3874 as a Sclerotinia sclerotiorum antagonist: mechanisms involved and potential as a biocontrol agent , 2011, Journal of applied microbiology.

[28]  R. Yoshida,et al.  Abscisic acid interacts antagonistically with salicylic acid signaling pathway in rice-Magnaporthe grisea interaction. , 2010, Molecular plant-microbe interactions : MPMI.

[29]  Cole Trapnell,et al.  Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation. , 2010, Nature biotechnology.

[30]  D. Klessig,et al.  Salicylic Acid, a multifaceted hormone to combat disease. , 2009, Annual review of phytopathology.

[31]  Tianzhen Zhang,et al.  Identification and molecular mapping of a Fusarium wilt resistant gene in upland cotton , 2009, Theoretical and Applied Genetics.

[32]  J. J. Coleman,et al.  Efflux in Fungi: La Pièce de Résistance , 2009, PLoS pathogens.

[33]  Lior Pachter,et al.  Sequence Analysis , 2020, Definitions.

[34]  R. Terauchi,et al.  Emerging concepts in effector biology of plant-associated organisms. , 2009, Molecular plant-microbe interactions : MPMI.

[35]  L. Bo.  Green fluorescent protein gene transformation on Fusarium oxysporum f. sp. niveum strain,FOV-135 , 2009 .

[36]  Cole Trapnell,et al.  Ultrafast and memory-efficient alignment of short DNA sequences to the human genome , 2009, Genome Biology.

[37]  M. Berrocal-Lobo,et al.  Arabidopsis defense response against Fusarium oxysporum. , 2008, Trends in plant science.

[38]  H. Lütken,et al.  Role of hydrogen peroxide during the interaction between the hemibiotrophic fungal pathogen Septoria tritici and wheat. , 2007, The New phytologist.

[39]  M. Wingfield,et al.  Tolerance in banana to Fusarium wilt is associated with early up-regulation of cell wall-strengthening genes in the roots. , 2007, Molecular plant pathology.

[40]  Youn-sung Kim,et al.  GH3-mediated Auxin Homeostasis Links Growth Regulation with Stress Adaptation Response in Arabidopsis* , 2007, Journal of Biological Chemistry.

[41]  A. McEwan,et al.  Defenses against Oxidative Stress in Neisseria gonorrhoeae: a System Tailored for a Challenging Environment , 2006, Microbiology and Molecular Biology Reviews.

[42]  A. Ohta,et al.  Aspergillus nidulans class V and VI chitin synthases CsmA and CsmB, each with a myosin motor‐like domain, perform compensatory functions that are essential for hyphal tip growth , 2006, Molecular microbiology.

[43]  S. Niture,et al.  Role of glucose in production and repression of polygalacturonase and pectate lyase from phytopathogenic fungus Fusarium moniliforme NCIM 1276 , 2006 .

[44]  J. Perfect,et al.  Cytochrome c peroxidase contributes to the antioxidant defense of Cryptococcus neoformans. , 2005, Fungal genetics and biology : FG & B.

[45]  W. Ko,et al.  Cavendish Banana Cultivars Resistant to Fusarium Wilt Acquired through Somaclonal Variation in Taiwan. , 2004, Plant disease.

[46]  H. Hirt,et al.  Reactive oxygen species: metabolism, oxidative stress, and signal transduction. , 2004, Annual review of plant biology.

[47]  V. DiRita,et al.  Identification of Campylobacter jejuni genes involved in commensal colonization of the chick gastrointestinal tract , 2004, Molecular microbiology.

[48]  A. P. Kloek,et al.  The Pseudomonas syringae type III effector AvrRpt2 functions downstream or independently of SA to promote virulence on Arabidopsis thaliana. , 2004, The Plant journal : for cell and molecular biology.

[49]  A. Able.  Role of reactive oxygen species in the response of barley to necrotrophic pathogens , 2003, Protoplasma.

[50]  A I Saeed,et al.  TM4: a free, open-source system for microarray data management and analysis. , 2003, BioTechniques.

[51]  A. Di Pietro,et al.  Class V chitin synthase determines pathogenesis in the vascular wilt fungus Fusarium oxysporum and mediates resistance to plant defence compounds , 2002, Molecular microbiology.

[52]  Hilde van der Togt,et al.  Publisher's Note , 2003, J. Netw. Comput. Appl..

[53]  B. Howlett,et al.  Pathogenicity genes of phytopathogenic fungi. , 2001, Molecular plant pathology.

[54]  R. Hückelhoven,et al.  A Compromised Mlo Pathway Affects the Response of Barley to the Necrotrophic Fungus Bipolaris sorokiniana (Teleomorph: Cochliobolus sativus) and Its Toxins. , 2001, Phytopathology.

[55]  N. Gow,et al.  Chitin synthesis in human pathogenic fungi. , 2001, Medical mycology.

[56]  C. Kubicek,et al.  Enzyme Diffusion from Trichoderma atroviride (=T. harzianum P1) to Rhizoctonia solani Is a Prerequisite for Triggering of Trichoderma ech42 Gene Expression before Mycoparasitic Contact , 2000, Applied and Environmental Microbiology.

[57]  Wang Zheng,et al.  GENETIC DIVERSITY IN Fusarium oxysporum , 2000 .

[58]  L. Debao,et al.  Genetic diversity in Fusarium oxysporum. , 2000 .

[59]  R. Ploetz.  Panama Disease: A Classic and Destructive Disease of Banana , 2000 .

[60]  J. Glazebrook,et al.  Arabidopsis PAD3, a Gene Required for Camalexin Biosynthesis, Encodes a Putative Cytochrome P450 Monooxygenase , 1999, Plant Cell.

[61]  K. Entian,et al.  The mitochondrial cytochrome c peroxidase Ccp1 of Saccharomyces cerevisiae is involved in conveying an oxidative stress signal to the transcription factor Pos9 (Skn7) , 1999, Molecular and General Genetics MGG.

[62]  G. Bolwell.  Role of active oxygen species and NO in plant defence responses. , 1999, Current opinion in plant biology.

[63]  A S Moffat,et al.  Crop Engineering Goes South , 1999, Science.

[64]  Simon Paul,et al.  Mycobacterium tuberculosis Catalase and Peroxidase Activities and Resistance to Oxidative Killing in Human Monocytes In Vitro , 1999, Infection and Immunity.

[65]  Young Ryun Chung,et al.  Biological control of fusarium wilt of cucumber by chitinolytic bacteria. , 1999, Phytopathology.

[66]  W. Bushnell,et al.  Isolation and expression of a host response gene family encoding thaumatin-like proteins in incompatible oat-stem rust fungus interactions. , 1996, Molecular plant-microbe interactions : MPMI.

[67]  P. Robbins,et al.  The chsD and chsE genes of Aspergillus nidulans and their roles in chitin synthesis. , 1996, Fungal genetics and biology : FG & B.

[68]  N. Gow,et al.  The Aspergillus fumigatus chsC and chsG genes encode Class III chitin synthases with different functions , 1996, Molecular microbiology.

[69]  Luis González-Candelas,et al.  Cloning of a novel constitutively expressed pectate lyase gene pelB from Fusarium solani f. sp. pisi (Nectria haematococca, mating type VI) and characterization of the gene product expressed in Pichia pastoris , 1995, Journal of bacteriology.

[70]  Alex Levine,et al.  H2O2 from the oxidative burst orchestrates the plant hypersensitive disease resistance response , 1994, Cell.

[71]  R. Young,et al.  Classification of fungal chitin synthases. , 1992, Proceedings of the National Academy of Sciences of the United States of America.

[72]  C. Alabouvette,et al.  Recherches sur la resistance des sols aux maladies.IX. Dynamique des populations du fusarium spp. et de fusarium oxysporum f. sp. melonis dans un sol resistant et dans un sol sensible aux fusarioses vasculaires , 1984 .

[73]  Y. Miyagi,et al.  Effects of Fungicides on Penetration by Pyricularia oryzae as Evaluated by an Improved Cellophane Method , 1977 .