Experimental determination of upper bound for transition path times in protein folding from single-molecule photon-by-photon trajectories
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[1] E. Rhoades,et al. Watching proteins fold one molecule at a time , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[2] W. Eaton,et al. Characterizing the unfolded states of proteins using single-molecule FRET spectroscopy and molecular simulations , 2007, Proceedings of the National Academy of Sciences.
[3] G. Ulrich Nienhaus,et al. Single-molecule Förster resonance energy transfer study of protein dynamics under denaturing conditions , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[4] A. Fersht,et al. Protein Folding and Unfolding at Atomic Resolution , 2002, Cell.
[5] B. Schuler,et al. Two-state folding observed in individual protein molecules. , 2004, Journal of the American Chemical Society.
[6] W. Eaton,et al. Protein folding studied by single-molecule FRET. , 2008, Current opinion in structural biology.
[7] Hans Robert Kalbitzer,et al. Role of entropy in protein thermostability: folding kinetics of a hyperthermophilic cold shock protein at high temperatures using 19F NMR. , 2002, Biochemistry.
[8] R. Hochstrasser,et al. Dynamics and folding of single two-stranded coiled-coil peptides studied by fluorescent energy transfer confocal microscopy. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[9] M. Karplus,et al. Protein Folding: A Perspective from Theory and Experiment. , 1998, Angewandte Chemie.
[10] A. Szabó,et al. Single-molecule FRET with diffusion and conformational dynamics. , 2007, The journal of physical chemistry. B.
[11] Dmitri K. Klimov,et al. Insights into Specific Problems in Protein Folding Using Simple Concepts , 2002 .
[12] Taekjip Ha,et al. Single-molecule three-color FRET. , 2004, Biophysical journal.
[13] Eugene Shakhnovich,et al. Protein folding thermodynamics and dynamics: where physics, chemistry, and biology meet. , 2006, Chemical reviews.
[14] P. Wolynes,et al. The experimental survey of protein-folding energy landscapes , 2005, Quarterly Reviews of Biophysics.
[15] Louis E. Brus,et al. Imaging and Time-Resolved Spectroscopy of Single Molecules at an Interface , 1996, Science.
[16] W. Eaton,et al. Probing the free-energy surface for protein folding with single-molecule fluorescence spectroscopy , 2002, Nature.
[17] K. Dill,et al. The protein folding problem. , 1993, Annual review of biophysics.
[18] J. Hofrichter,et al. Effects of chain stiffness on the dynamics of loop formation in polypeptides. Appendix: Testing a 1-dimensional diffusion model for peptide dynamics , 2002 .
[19] Robert B Best,et al. Effect of flexibility and cis residues in single-molecule FRET studies of polyproline , 2007, Proceedings of the National Academy of Sciences.
[20] Lisa J. Lapidus,et al. Effects of denaturants on the dynamics of loop formation in polypeptides. , 2006, Biophysical journal.
[21] J. Onuchic,et al. Funnels, pathways, and the energy landscape of protein folding: A synthesis , 1994, Proteins.
[22] Eilon Sherman,et al. Coil-globule transition in the denatured state of a small protein. , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[23] Daniel Herschlag,et al. Measuring the folding transition time of single RNA molecules. , 2007, Biophysical journal.
[24] Everett A Lipman,et al. Single-Molecule Measurement of Protein Folding Kinetics , 2003, Science.
[25] G. Hummer. From transition paths to transition states and rate coefficients. , 2004, The Journal of chemical physics.
[26] J. Hofrichter,et al. The protein folding 'speed limit'. , 2004, Current opinion in structural biology.
[27] Nam Ki Lee,et al. Three-color alternating-laser excitation of single molecules: monitoring multiple interactions and distances. , 2007, Biophysical journal.
[28] E. Shakhnovich,et al. The ensemble folding kinetics of protein G from an all-atom Monte Carlo simulation , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[29] R. Seckler,et al. Mapping protein collapse with single-molecule fluorescence and kinetic synchrotron radiation circular dichroism spectroscopy , 2006, Proceedings of the National Academy of Sciences.
[30] Jean-Pierre Clamme,et al. Three-color single-molecule fluorescence resonance energy transfer. , 2005, Chemphyschem : a European journal of chemical physics and physical chemistry.
[31] E. Shakhnovich,et al. Side‐chain dynamics and protein folding , 2001, Proteins.
[32] B. Schuler,et al. Unfolded protein and peptide dynamics investigated with single-molecule FRET and correlation spectroscopy from picoseconds to seconds. , 2008, The journal of physical chemistry. B.
[33] Shimon Weiss,et al. Probing structural heterogeneities and fluctuations of nucleic acids and denatured proteins. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[34] Peter G. Wolynes,et al. Analyzing single molecule trajectories on complex energy landscapes using replica correlation functions , 1999 .
[35] Eric J. Sorin,et al. How well can simulation predict protein folding kinetics and thermodynamics? , 2005, Annual review of biophysics and biomolecular structure.
[36] T. Kiefhaber,et al. End-to-end distance distributions and intrachain diffusion constants in unfolded polypeptide chains indicate intramolecular hydrogen bond formation , 2006, Proceedings of the National Academy of Sciences.
[37] Benjamin Schuler,et al. Ultrafast dynamics of protein collapse from single-molecule photon statistics , 2007, Proceedings of the National Academy of Sciences.
[38] D. Baker,et al. Critical role of β-hairpin formation in protein G folding , 2000, Nature Structural Biology.
[39] T. Sosnick,et al. Fast and slow intermediate accumulation and the initial barrier mechanism in protein folding. , 2002, Journal of molecular biology.
[40] G. Nienhaus,et al. Single-molecule FRET study of denaturant induced unfolding of RNase H. , 2006, Journal of molecular biology.