Analysis of methylation microarray for tissue specific detection.
暂无分享,去创建一个
[1] F. Naef,et al. Characteristic bimodal profiles of RNA polymerase II at thousands of active mammalian promoters , 2014, Genome Biology.
[2] D. Weisenberger. Characterizing DNA methylation alterations from The Cancer Genome Atlas. , 2014, The Journal of clinical investigation.
[3] A. Shilatifard,et al. Transcriptional elongation checkpoint control in development and disease. , 2013, Genes & development.
[4] Benjamin Meder,et al. Alterations in cardiac DNA methylation in human dilated cardiomyopathy , 2013, EMBO molecular medicine.
[5] M. Gut,et al. Supplemental information for : “ CpG islands and GC content dictate nucleosome depletion in a transcription independent manner at mammalian promoters ” , 2012 .
[6] Eivind Hovig,et al. Integrative Analysis Reveals Relationships of Genetic and Epigenetic Alterations in Osteosarcoma , 2012, PloS one.
[7] Helene Myrtue Nielsen,et al. DNA methylation based biomarkers: practical considerations and applications. , 2012, Biochimie.
[8] N. Guex,et al. Genome-Wide RNA Polymerase II Profiles and RNA Accumulation Reveal Kinetics of Transcription and Associated Epigenetic Changes During Diurnal Cycles , 2012, PLoS biology.
[9] B. Teh,et al. Methylation Subtypes and Large-Scale Epigenetic Alterations in Gastric Cancer , 2012, Science Translational Medicine.
[10] S. Horvath,et al. Aging effects on DNA methylation modules in human brain and blood tissue , 2012, Genome Biology.
[11] Annabelle L. Fonseca,et al. Comprehensive DNA methylation analysis of benign and malignant adrenocortical tumors , 2012, Genes, chromosomes & cancer.
[12] Xiangyu Zhang,et al. Altered DNA methylation profile in idiopathic pulmonary fibrosis. , 2012, American journal of respiratory and critical care medicine.
[13] M. Fraga,et al. Effects of short-term high-fat overfeeding on genome-wide DNA methylation in the skeletal muscle of healthy young men , 2012, Diabetologia.
[14] P. Delvenne,et al. Aberrant Promoter Methylation and Expression of UTF1 during Cervical Carcinogenesis , 2012, PloS one.
[15] T. Down,et al. A functional methylome map of ulcerative colitis , 2012, Genome research.
[16] Allissa Dillman,et al. Edinburgh Research Explorer Integration of GWAS SNPs and tissue specific expression profiling reveal discrete eQTLs for human traits in blood and brain , 2022 .
[17] S. Lam,et al. Genome-scale analysis of DNA methylation in lung adenocarcinoma and integration with mRNA expression , 2012, Genome research.
[18] M. Ringnér,et al. DNA methylation analyses of urothelial carcinoma reveal distinct epigenetic subtypes and an association between gene copy number and methylation status , 2012, Epigenetics.
[19] Howard Cedar,et al. Programming of DNA methylation patterns. , 2012, Annual review of biochemistry.
[20] Jing Shen,et al. Genome‐wide DNA methylation profiles in hepatocellular carcinoma , 2012, Hepatology.
[21] Peter A. Jones. Functions of DNA methylation: islands, start sites, gene bodies and beyond , 2012, Nature Reviews Genetics.
[22] H. Kitchener,et al. Epigenetic variability in cells of normal cytology is associated with the risk of future morphological transformation , 2012, Genome Medicine.
[23] Dan Wang,et al. IMA: an R package for high-throughput analysis of Illumina's 450K Infinium methylation data , 2012, Bioinform..
[24] Rondi A. Butler,et al. Peripheral blood DNA methylation profiles are indicative of head and neck squamous cell carcinoma: An epigenome-wide association study , 2012, Epigenetics.
[25] H. Kitchener,et al. The Dynamics and Prognostic Potential of DNA Methylation Changes at Stem Cell Gene Loci in Women's Cancer , 2012, PLoS genetics.
[26] Matthieu Defrance,et al. DNA methylation profiling identifies epigenetic dysregulation in pancreatic islets from type 2 diabetic patients , 2012, The EMBO journal.
[27] S. Scherer,et al. Clonal Selection Drives Genetic Divergence of Metastatic Medulloblastoma , 2012, Nature.
[28] K. V. Donkena,et al. Batch effect correction for genome-wide methylation data with Illumina Infinium platform , 2011, BMC Medical Genomics.
[29] P. Laird,et al. Genome-Scale Screen for DNA Methylation-Based Detection Markers for Ovarian Cancer , 2011, PloS one.
[30] H. Aburatani,et al. Classification of Epstein-Barr virus-positive gastric cancers by definition of DNA methylation epigenotypes. , 2011, Cancer research.
[31] Benjamin Haibe-Kains,et al. DNA methylation profiling reveals a predominant immune component in breast cancers , 2011, EMBO molecular medicine.
[32] Alan Menter,et al. A subset of methylated CpG sites differentiate psoriatic from normal skin , 2011, The Journal of investigative dermatology.
[33] Apiwat Mutirangura,et al. Epithelial-Specific Methylation Marker: A Potential Plasma Biomarker in Advanced Non-small Cell Lung Cancer , 2011, Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer.
[34] Bruce Budowle,et al. DNA methylation-based forensic tissue identification. , 2011, Forensic science international. Genetics.
[35] Peng Huang,et al. Genome-wide methylation analysis identifies genes specific to breast cancer hormone receptor status and risk of recurrence. , 2011, Cancer research.
[36] Gavin Sherlock,et al. DNA methylation profiling reveals novel biomarkers and important roles for DNA methyltransferases in prostate cancer. , 2011, Genome research.
[37] F. Jasmine,et al. A genome-wide DNA methylation study in colorectal carcinoma , 2011, BMC Medical Genomics.
[38] Steve Horvath,et al. Epigenetic Predictor of Age , 2011, PloS one.
[39] M. Levine. Paused RNA Polymerase II as a Developmental Checkpoint , 2011, Cell.
[40] C. Ricketts,et al. Genome-wide DNA methylation profiling of CpG islands in breast cancer identifies novel genes associated with tumorigenicity. , 2011, Cancer research.
[41] N. Kitkumthorn,et al. Long interspersed nuclear element-1 hypomethylation in cancer: biology and clinical applications , 2011, Clinical Epigenetics.
[42] Nikolina Radulovich,et al. Prognostic gene-expression signature of carcinoma-associated fibroblasts in non-small cell lung cancer , 2011, Proceedings of the National Academy of Sciences.
[43] A. Mutirangura,et al. Connection up- and down-regulation expression analysis of microarrays (CU-DREAM): a physiogenomic discovery tool , 2011 .
[44] Oh-Hyung Kwon,et al. Aberrant up-regulation of LAMB3 and LAMC2 by promoter demethylation in gastric cancer. , 2011, Biochemical and biophysical research communications.
[45] J. Piriyapongsa,et al. Hypomethylation of Intragenic LINE-1 Represses Transcription in Cancer Cells through AGO2 , 2011, PloS one.
[46] Mark R Cookson,et al. Distinct DNA methylation changes highly correlated with chronological age in the human brain. , 2011, Human molecular genetics.
[47] C. Suschek,et al. Specific Age-Associated DNA Methylation Changes in Human Dermal Fibroblasts , 2011, PloS one.
[48] H. Kim,et al. Epigenomic Analysis of Aberrantly Methylated Genes in Colorectal Cancer Identifies Genes Commonly Affected by Epigenetic Alterations , 2011, Annals of Surgical Oncology.
[49] J. Bell,et al. A Genome-Wide Study of DNA Methylation Patterns and Gene Expression Levels in Multiple Human and Chimpanzee Tissues , 2011, PLoS genetics.
[50] J. Mosser,et al. DNA methylation in glioblastoma: impact on gene expression and clinical outcome , 2010, BMC Genomics.
[51] L. Aravind,et al. Impaired hydroxylation of 5-methylcytosine in myeloid cancers with mutant TET2 , 2010, Nature.
[52] Bin Xie,et al. Pausing of RNA Polymerase II Disrupts DNA-Specified Nucleosome Organization to Enable Precise Gene Regulation , 2010, Cell.
[53] Allen D. Delaney,et al. Conserved Role of Intragenic DNA Methylation in Regulating Alternative Promoters , 2010, Nature.
[54] Luigi Ferrucci,et al. Abundant Quantitative Trait Loci Exist for DNA Methylation and Gene Expression in Human Brain , 2010, PLoS genetics.
[55] Swati Kadam,et al. Examination of the specificity of DNA methylation profiling techniques towards 5-methylcytosine and 5-hydroxymethylcytosine , 2010, Nucleic acids research.
[56] Wolfgang Wagner,et al. Age-dependent DNA methylation of genes that are suppressed in stem cells is a hallmark of cancer. , 2010, Genome research.
[57] Owen T McCann,et al. Human aging-associated DNA hypermethylation occurs preferentially at bivalent chromatin domains. , 2010, Genome research.
[58] M. D’Occhio,et al. Different DNA methylation patterns detected by the Amplified Methylation Polymorphism Polymerase Chain Reaction (AMP PCR) technique among various cell types of bulls , 2010, Acta veterinaria Scandinavica.
[59] Kimberly D Siegmund,et al. Epigenetic profiling of somatic tissues from human autopsy specimens identifies tissue- and individual-specific DNA methylation patterns. , 2009, Human molecular genetics.
[60] K. Gunderson,et al. Genome-wide DNA methylation profiling using Infinium® assay. , 2009, Epigenomics.
[61] X. Liu,et al. DNA methylation profile of tissue-dependent and differentially methylated regions (T-DMRs) in mouse promoter regions demonstrating tissue-specific gene expression. , 2008, Genome research.
[62] Yidong Chen,et al. GEOmetadb: powerful alternative search engine for the Gene Expression Omnibus , 2008, Bioinform..
[63] Marcel H. Schulz,et al. A Global View of Gene Activity and Alternative Splicing by Deep Sequencing of the Human Transcriptome , 2008, Science.
[64] S. Yagi,et al. Epigenetics: the DNA methylation profile of tissue-dependent and differentially methylated regions in cells. , 2008, Placenta.
[65] Manolis Kellis,et al. RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo , 2007, Nature Genetics.
[66] J. Rogers,et al. DNA methylation profiling of human chromosomes 6, 20 and 22 , 2006, Nature Genetics.
[67] A. Mutirangura,et al. SHP-1 promoter 2 methylation in normal epithelial tissues and demethylation in psoriasis , 2006, Journal of Molecular Medicine.
[68] Apiwat Mutirangura,et al. Distinctive pattern of LINE-1 methylation level in normal tissues and the association with carcinogenesis , 2004, Oncogene.
[69] Yau-Huei Wei,et al. Quantification of plasma Epstein-Barr virus DNA in patients with advanced nasopharyngeal carcinoma. , 2004, The New England journal of medicine.
[70] Satoshi Tanaka,et al. Epigenetic marks by DNA methylation specific to stem, germ and somatic cells in mice , 2002, Genes to cells : devoted to molecular & cellular mechanisms.
[71] Peter A. Jones,et al. The Role of DNA Methylation in Mammalian Epigenetics , 2001, Science.
[72] A. Theamboonlers,et al. Epstein-Barr viral DNA in serum of patients with nasopharyngeal carcinoma. , 1998, Clinical cancer research : an official journal of the American Association for Cancer Research.
[73] Pakorn Winayanuwattikun,et al. The impact of non-tumor-derived circulating nucleic acids implicates the prognosis of non-small cell lung cancer , 2012, Journal of Cancer Research and Clinical Oncology.
[74] J. Nikliński,et al. Detection of DNA methylation in eucaryotic cells. , 2007, Folia histochemica et cytobiologica.