Classifying Drosophila Olfactory Projection Neuron Subtypes by Single-Cell RNA Sequencing
暂无分享,去创建一个
Bing Wu | Liqun Luo | Jiefu Li | Stephen R. Quake | S. Quake | L. Luo | Tongchao Li | Jiefu Li | Hongjie Li | Felix Horns | Qijing Xie | David Luginbuhl | Hongjie Li | Felix Horns | Qijing Xie | Tongchao Li | David J. Luginbuhl | Bing Wu
[1] Thomas R. Gingeras,et al. STAR: ultrafast universal RNA-seq aligner , 2013, Bioinform..
[2] Paul Theodor Pyl,et al. HTSeq—a Python framework to work with high-throughput sequencing data , 2014, bioRxiv.
[3] L. Luo,et al. Representation of the Glomerular Olfactory Map in the Drosophila Brain , 2002, Cell.
[4] Gregory S.X.E. Jefferis,et al. From Lineage to Wiring Specificity POU Domain Transcription Factors Control Precise Connections of Drosophila Olfactory Projection Neurons , 2003, Cell.
[5] N. Strausfeld,et al. Dynamics of glutamatergic signaling in the mushroom body of young adult Drosophila , 2010, Neural Development.
[6] Evan Z. Macosko,et al. Comprehensive Classification of Retinal Bipolar Neurons by Single-Cell Transcriptomics , 2016, Cell.
[7] Ronald L. Davis,et al. roX1 RNA Paints the X Chromosome of Male Drosophila and Is Regulated by the Dosage Compensation System , 1997, Cell.
[8] Ramanathan Arvind,et al. Knot/Collier and Cut Control Different Aspects of Dendrite Cytoskeleton and Synergize to Define Final Arbor Shape , 2007, Neuron.
[9] Ariane Ramaekers,et al. Developmental origin of wiring specificity in the olfactory system of Drosophila , 2004, Development.
[10] M. Freeman,et al. Neuron-Glia Interactions through the Heartless FGF Receptor Signaling Pathway Mediate Morphogenesis of Drosophila Astrocytes , 2014, Neuron.
[11] Arthur Zimek,et al. A framework for semi-supervised and unsupervised optimal extraction of clusters from hierarchies , 2013, Data Mining and Knowledge Discovery.
[12] E. O’Shea,et al. Global analysis of protein expression in yeast , 2003, Nature.
[13] Tzumin Lee,et al. Lineage Analysis of Drosophila Lateral Antennal Lobe Neurons Reveals Notch-Dependent Binary Temporal Fate Decisions , 2012, PLoS biology.
[14] L. Luo,et al. Intrinsic Control of Precise Dendritic Targeting by an Ensemble of Transcription Factors , 2007, Current Biology.
[15] L. Luo,et al. Toll Receptors Instruct Axon and Dendrite Targeting and Participate in Synaptic Partner Matching in a Drosophila Olfactory Circuit , 2015, Neuron.
[16] Mary A. Logan,et al. Ensheathing Glia Function as Phagocytes in the Adult Drosophila Brain , 2009, The Journal of Neuroscience.
[17] Rachel I. Wilson,et al. Origins of correlated activity in an olfactory circuit , 2009, Nature Neuroscience.
[18] L. Luo,et al. Teneurins Instruct Synaptic Partner Matching in an Olfactory Map , 2012, Nature.
[19] B. Dickson. Wired for Sex: The Neurobiology of Drosophila Mating Decisions , 2008, Science.
[20] Roberto Battiti,et al. Using mutual information for selecting features in supervised neural net learning , 1994, IEEE Trans. Neural Networks.
[21] Åsa K. Björklund,et al. Full-length RNA-seq from single cells using Smart-seq2 , 2014, Nature Protocols.
[22] Claude E. Shannon,et al. The mathematical theory of communication , 1950 .
[23] Liqun Luo,et al. Target neuron prespecification in the olfactory map of Drosophila , 2001, Nature.
[24] Liang Liang,et al. GABAergic Projection Neurons Route Selective Olfactory Inputs to Specific Higher-Order Neurons , 2013, Neuron.
[25] Julie H. Simpson,et al. A GAL4-driver line resource for Drosophila neurobiology. , 2012, Cell reports.
[26] Kutay D Atabay,et al. Single-cell analysis reveals transcriptional heterogeneity of neural progenitors in human cortex , 2015, Nature Neuroscience.
[27] Liqun Luo,et al. Mosaic Analysis with a Repressible Cell Marker for Studies of Gene Function in Neuronal Morphogenesis , 1999, Neuron.
[28] Stephen R Quake,et al. Cellular Taxonomy of the Mouse Striatum as Revealed by Single-Cell RNA-Seq. , 2016, Cell reports.
[29] Sang Joon Kim,et al. A Mathematical Theory of Communication , 2006 .
[30] Thomas M. Cover,et al. Elements of Information Theory , 2005 .
[31] Yisheng He,et al. A Complete Developmental Sequence of a Drosophila Neuronal Lineage as Revealed by Twin-Spot MARCM , 2010, PLoS biology.
[32] E. Suzuki,et al. A Screen of Cell-Surface Molecules Identifies Leucine-Rich Repeat Proteins as Key Mediators of Synaptic Target Selection , 2008, Neuron.
[33] Yuchio Yanagawa,et al. Integration of electrophysiological recordings with single-cell RNA-seq data identifies novel neuronal subtypes , 2015, Nature Biotechnology.
[34] Staci A. Sorensen,et al. Adult Mouse Cortical Cell Taxonomy Revealed by Single Cell Transcriptomics , 2016 .
[35] L. Luo,et al. A protocol for dissecting Drosophila melanogaster brains for live imaging or immunostaining , 2006, Nature Protocols.
[36] L. Luo,et al. Genetic Control of Wiring Specificity in the Fly Olfactory System , 2014, Genetics.
[37] C. Doe,et al. The role of the cell cycle and cytokinesis in regulating neuroblast sublineage gene expression in the Drosophila CNS. , 1995, Development.
[38] L. Luo,et al. Synaptic organization of the Drosophila antennal lobe and its regulation by the Teneurins , 2014, eLife.
[39] L. Luo,et al. Leucine-Rich Repeat Transmembrane Proteins Instruct Discrete Dendrite Targeting in an Olfactory Map , 2009, Nature Neuroscience.
[40] Spyros Darmanis,et al. Single-cell RNAseq reveals cell adhesion molecule profiles in electrophysiologically defined neurons , 2016, Proceedings of the National Academy of Sciences.
[41] S. Linnarsson,et al. Unbiased classification of sensory neuron types by large-scale single-cell RNA sequencing , 2014, Nature Neuroscience.
[42] Richard Axel,et al. Spatial Representation of the Glomerular Map in the Drosophila Protocerebrum , 2002, Cell.
[43] L. Luo,et al. Comprehensive Maps of Drosophila Higher Olfactory Centers: Spatially Segregated Fruit and Pheromone Representation , 2007, Cell.
[44] Christopher A Walsh,et al. Cerebral cortical neuron diversity and development at single-cell resolution , 2017, Current Opinion in Neurobiology.
[45] S. Quake,et al. A survey of human brain transcriptome diversity at the single cell level , 2015, Proceedings of the National Academy of Sciences.
[46] William F Tobin,et al. Wiring variations that enable and constrain neural computation in a sensory microcircuit , 2017, bioRxiv.
[47] Chong-Ho Choi,et al. Input feature selection for classification problems , 2002, IEEE Trans. Neural Networks.
[48] Rachel I. Wilson. Early olfactory processing in Drosophila: mechanisms and principles. , 2013, Annual review of neuroscience.
[49] Matko Bosnjak,et al. REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms , 2011, PloS one.
[50] Geoffrey E. Hinton,et al. Visualizing Data using t-SNE , 2008 .
[51] P. Hiesinger,et al. Three‐dimensional reconstruction of the antennal lobe in Drosophila melanogaster , 1999, The Journal of comparative neurology.
[52] Shin-ya Takemura,et al. Ig Superfamily Ligand and Receptor Pairs Expressed in Synaptic Partners in Drosophila , 2015, Cell.
[53] Liang Liang,et al. The Q System: A Repressible Binary System for Transgene Expression, Lineage Tracing, and Mosaic Analysis , 2010, Cell.
[54] F. Diao,et al. Plug-and-play genetic access to drosophila cell types using exchangeable exon cassettes. , 2015, Cell reports.
[55] R. Stocker,et al. Neuroblast ablation in Drosophila P[GAL4] lines reveals origins of olfactory interneurons. , 1997, Journal of neurobiology.
[56] G. Campbell. Regulation of gene expression in the distal region of the Drosophila leg by the Hox11 homolog, C15. , 2005, Developmental biology.
[57] L. Vosshall,et al. Molecular architecture of smell and taste in Drosophila. , 2007, Annual review of neuroscience.
[58] S. Linnarsson,et al. Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq , 2015, Science.