Computational coral feature monitoring for the fixed underwater observatory LoVe

Fixed underwater observatories (FUOs) equipped with a variety of sensors including HD cameras, allow long-term monitoring with a high temporal resolution of a limited area of interest. FUOs enable in situ monitoring of visual features like size and color of for instance live cold-water corals using imaging techniques. We present a computational workflow to extract coral features from the huge collection of images recorded by the FUO LoVe (Lofoten - Vesterålen)1. The presented approach allows to represent the image-time-series as numerical values of the features. This enables the images to be subject to statistical analysis to gain insight into the short- and long-term relationships between the corals and the environment. The presented automatic extraction of features from digital photos includes a customized pre-processing of the images (spatial and signal alignment), automated segmentation of the living parts of the corals using an unsupervised learning algorithm and extraction of coral specific numerical features which compensate color shifts due to changes of the in-optical properties affecting the whole image. In this initial study, unexpected temporal change patterns could be revealed, by comparing change patterns of live coral areas with change patterns of coral rubble areas using the CIELab color space.

[1]  Ruiju Tong,et al.  Microhabitat and shrimp abundance within a Norwegian cold-water coral ecosystem , 2013 .

[2]  Olav Rune Godø,et al.  The LoVe Ocean Observatory is in Operation , 2014 .

[3]  Tomas Lundälv,et al.  Distributional patterns of macro- and megafauna associated with a reef of the cold-water coral Lophelia pertusa on the Swedish west coast , 2004 .

[4]  Tim W. Nattkemper,et al.  RecoMIA—Recommendations for Marine Image Annotation: Lessons Learned and Future Directions , 2016, Front. Mar. Sci..

[5]  Raimondo Schettini,et al.  Underwater Image Processing: State of the Art of Restoration and Image Enhancement Methods , 2010, EURASIP J. Adv. Signal Process..

[6]  Georgios D. Evangelidis,et al.  Parametric Image Alignment Using Enhanced Correlation Coefficient Maximization , 2008, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[7]  Pål Buhl-Mortensen,et al.  Effects of water flow and drilling waste exposure on polyp behaviour in Lophelia pertusa , 2015 .

[8]  Helge J. Ritter,et al.  Hyperbolic Self-Organizing Maps for Semantic Navigation , 2001, NIPS.

[9]  Jonas Osterloff,et al.  Computational Visual Stress Level Analysis of Calcareous Algae Exposed to Sedimentation , 2016, PloS one.

[10]  Rüdiger Henrich,et al.  Grounding Pleistocene icebergs shape recent deep-water coral reefs , 1999 .

[11]  J. Schanda,et al.  Colorimetry : understanding the CIE system , 2007 .

[12]  Jonas Osterloff,et al.  A computer vision approach for monitoring the spatial and temporal shrimp distribution at the LoVe observatory , 2016 .

[13]  Autun Purser,et al.  A Time Series Study of Lophelia pertusa and Reef Megafauna Responses to Drill Cuttings Exposure on the Norwegian Margin , 2015, PloS one.

[14]  Marc Ebner,et al.  Color Constancy , 2007, Computer Vision, A Reference Guide.

[15]  P. B. Mortensen,et al.  Species diversity and spatial distribution of invertebrates on deep-water Lophelia reefs in Norway , 2008 .

[16]  Ronald A. Rensink,et al.  Change blindness: past, present, and future , 2005, Trends in Cognitive Sciences.

[17]  T. Wassmer 6 , 1900, EXILE.

[18]  Jörg Ontrup,et al.  Use of machine-learning algorithms for the automated detection of cold-water coral habitats: a pilot study , 2009 .