From single cells to tissue architecture—a bottom-up approach to modelling the spatio-temporal organisation of complex multi-cellular systems
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[1] G. Hahn. State vector description of the proliferation of mammalian cells in tissue culture. I. Exponential growth. , 1966, Biophysical journal.
[2] G. Axelby,et al. Exponential Growth , 1967, Introduction to Modern Climate Change.
[3] Epidermal cell proliferation , 1987, Virchows Archiv. B, Cell pathology including molecular pathology.
[4] M. Loeffler,et al. Epidermal cell proliferation , 1987, Virchows Archiv. B, Cell pathology including molecular pathology.
[5] Glazier,et al. Simulation of biological cell sorting using a two-dimensional extended Potts model. , 1992, Physical review letters.
[6] J. McCaskill,et al. Monte Carlo approach to tissue-cell populations. , 1995, Physical review. E, Statistical physics, plasmas, fluids, and related interdisciplinary topics.
[7] J. Hickman,et al. Requirement of basement membrane for the suppression of programmed cell death in mammary epithelium. , 1996, Journal of cell science.
[8] Paolo A. Netti,et al. Solid stress inhibits the growth of multicellular tumor spheroids , 1997, Nature Biotechnology.
[9] Christopher S Potten,et al. 1 – Stem cells and cellular pedigrees – a conceptual introduction , 1997 .
[10] C. S. Chen,et al. Demonstration of mechanical connections between integrins, cytoskeletal filaments, and nucleoplasm that stabilize nuclear structure. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[11] I. Gelfand,et al. Cell-cell contact changes the dynamics of lamellar activity in nontransformed epitheliocytes but not in their ras-transformed descendants. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[12] C. S. Chen,et al. Geometric control of cell life and death. , 1997, Science.
[13] R. Mollard,et al. A correlation between epithelial proliferation rates, basement membrane component localization patterns, and morphogenetic potential in the embryonic mouse lung. , 1998, American journal of respiratory cell and molecular biology.
[14] R L Juliano,et al. Cell adhesion molecules, signal transduction and cell growth. , 1999, Current opinion in cell biology.
[15] M. Fiore,et al. Dimethyl sulfoxide restores contact inhibition-induced growth arrest and inhibits cell density-dependent apoptosis in hamster cells. , 1999, Experimental cell research.
[16] G. Landberg,et al. Human colorectal cancers with an intact p16/cyclin D1/pRb pathway have up-regulated p16 expression and decreased proliferation in small invasive tumor clusters. , 2000, The American journal of pathology.
[17] M. Schwartz,et al. Focal adhesion kinase suppresses Rho activity to promote focal adhesion turnover. , 2000, Journal of cell science.
[18] H. Othmer,et al. A model for individual and collective cell movement in Dictyostelium discoideum. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[19] D. Beysens,et al. Cell sorting is analogous to phase ordering in fluids. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[20] Hermann E. Gaub,et al. Discrete interactions in cell adhesion measured by single-molecule force spectroscopy , 2000, Nature Cell Biology.
[21] P. Hogeweg,et al. Evolving mechanisms of morphogenesis: on the interplay between differential adhesion and cell differentiation. , 2000, Journal of theoretical biology.
[22] J. Beaulieu,et al. Interactions between laminin and epithelial cells in intestinal health and disease , 2001, Expert Reviews in Molecular Medicine.
[23] J W Wimpenny,et al. Individual-based modelling of biofilms. , 2001, Microbiology.
[24] J. Schölmerich,et al. Apoptotic signaling during initiation of detachment-induced apoptosis ("anoikis") of primary human intestinal epithelial cells. , 2001, Cell growth & differentiation : the molecular biology journal of the American Association for Cancer Research.
[25] J. Käs,et al. The optical stretcher: a novel laser tool to micromanipulate cells. , 2001, Biophysical journal.
[26] R. Dickson,et al. Adhesion-regulated G1 cell cycle arrest in epithelial cells requires the downregulation of c-Myc , 2001, Oncogene.
[27] M. Loeffler,et al. Cell migration and organization in the intestinal crypt using a lattice‐free model , 2001, Cell proliferation.
[28] R. Knuechel,et al. Variable β-catenin expression in colorectal cancers indicates tumor progression driven by the tumor environment , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[29] J. Thiery. Epithelial–mesenchymal transitions in tumour progression , 2002, Nature Reviews Cancer.
[30] G. Charras,et al. Determination of cellular strains by combined atomic force microscopy and finite element modeling. , 2002, Biophysical journal.
[31] O. Thoumine,et al. Predicting the kinetics of cell spreading. , 2002, Journal of biomechanics.
[32] Ingo Roeder,et al. Tissue Stem Cells: Definition, Plasticity, Heterogeneity, Self-Organization and Models – A Conceptual Approach , 2002, Cells Tissues Organs.
[33] G. Aust,et al. Expression and regulation of CD97 in colorectal carcinoma cell lines and tumor tissues. , 2002, The American journal of pathology.
[34] Hermann E. Gaub,et al. Measuring Cell Adhesion Forces with the Atomic Force Microscope at the Molecular Level , 2002, Cells Tissues Organs.
[35] N. Balaban,et al. Calculation of forces at focal adhesions from elastic substrate data: the effect of localized force and the need for regularization. , 2002, Biophysical journal.
[36] A. Deutsch,et al. Modeling of self-organized avascular tumor growth with a hybrid cellular automaton. , 2002, In silico biology.
[37] G Wayne Brodland,et al. Computer simulations of mitosis and interdependencies between mitosis orientation, cell shape and epithelia reshaping. , 2002, Journal of biomechanics.
[38] D. Ingber. Tensegrity I. Cell structure and hierarchical systems biology , 2003, Journal of Cell Science.
[39] H. Beug,et al. Diverse cellular and molecular mechanisms contribute to epithelial plasticity and metastasis , 2003, Nature Reviews Molecular Cell Biology.
[40] S. Shvartsman,et al. Discrete models of autocrine cell communication in epithelial layers. , 2003, Biophysical journal.
[41] C. Murphy,et al. Epithelial contact guidance on well-defined micro- and nanostructured substrates , 2003, Journal of Cell Science.
[42] A. Brú,et al. The universal dynamics of tumor growth. , 2003, Biophysical journal.
[43] W. Bodmer,et al. Bottom-up histogenesis of colorectal adenomas: origin in the monocryptal adenoma and initial expansion by crypt fission. , 2003, Cancer research.
[44] D. Ingber. Tensegrity II. How structural networks influence cellular information processing networks , 2003, Journal of Cell Science.
[45] K. Wennerberg,et al. Integrin signaling to the actin cytoskeleton. , 2003, Current opinion in cell biology.
[46] P. Friedl,et al. Tumour-cell invasion and migration: diversity and escape mechanisms , 2003, Nature Reviews Cancer.
[47] Erik Sahai,et al. Differing modes of tumour cell invasion have distinct requirements for Rho/ROCK signalling and extracellular proteolysis , 2003, Nature Cell Biology.
[48] Baofeng Yang,et al. Opposite Cell Density-Dependence between Spontaneous and Oxidative Stress-Induced Apoptosis in Mouse Fibroblast L-Cells , 2003, Cellular Physiology and Biochemistry.
[49] Irving L Weissman,et al. Plasticity of Adult Stem Cells , 2004, Cell.
[50] F. Balkwill. Cancer and the chemokine network , 2004, Nature Reviews Cancer.
[51] P. Friedl. Prespecification and plasticity: shifting mechanisms of cell migration. , 2004, Current opinion in cell biology.
[52] Thomas Kirchner,et al. Down-Regulation of the Homeodomain Factor Cdx2 in Colorectal Cancer by Collagen Type I , 2004, Cancer Research.
[53] P. Quesenberry,et al. Stem cell plasticity: an overview. , 2004, Blood cells, molecules & diseases.
[54] Tatsuzo Nagai,et al. A three-dimensional vertex dynamics cell model of space-filling polyhedra simulating cell behavior in a cell aggregate. , 2004, Journal of theoretical biology.
[55] R. Mahaffy,et al. Quantitative analysis of the viscoelastic properties of thin regions of fibroblasts using atomic force microscopy. , 2004, Biophysical journal.
[56] Jesús A. Izaguirre,et al. COMPUCELL, a multi-model framework for simulation of morphogenesis , 2004, Bioinform..
[57] Christopher S. Chen,et al. Cell shape, cytoskeletal tension, and RhoA regulate stem cell lineage commitment. , 2004, Developmental cell.
[58] M. Kirkland,et al. A phase space model of hemopoiesis and the concept of stem cell renewal. , 2004, Experimental hematology.
[59] Dennis Discher,et al. Substrate compliance versus ligand density in cell on gel responses. , 2004, Biophysical journal.
[60] Hans G Othmer,et al. How cellular movement determines the collective force generated by the Dictyostelium discoideum slug. , 2004, Journal of theoretical biology.
[61] Philip K. Maini,et al. Mathematical models of avascular cancer , 2005 .
[62] A. Anderson,et al. A hybrid mathematical model of solid tumour invasion: the importance of cell adhesion , 2005 .
[63] Erik Sahai,et al. Tumor cells caught in the act of invading: their strategy for enhanced cell motility. , 2005, Trends in cell biology.
[64] M. Loeffler,et al. Modeling the effect of deregulated proliferation and apoptosis on the growth dynamics of epithelial cell populations in vitro. , 2005, Biophysical journal.
[65] Gernot Schaller,et al. Multicellular tumor spheroid in an off-lattice Voronoi-Delaunay cell model. , 2004, Physical review. E, Statistical, nonlinear, and soft matter physics.
[66] D. Drasdo,et al. A single-cell-based model of tumor growth in vitro: monolayers and spheroids , 2005, Physical biology.
[67] S. Ichinose,et al. Morphological examination during in vitro cartilage formation by human mesenchymal stem cells , 2005, Cell and Tissue Research.
[68] Thomas Kirchner,et al. Migrating cancer stem cells — an integrated concept of malignant tumour progression , 2005, Nature Reviews Cancer.
[69] I. Mackenzie,et al. Retention of intrinsic stem cell hierarchies in carcinoma-derived cell lines. , 2005, Cancer research.
[70] Alexander A Spector,et al. Emergent patterns of growth controlled by multicellular form and mechanics. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[71] D. Ingber,et al. Cellular mechanotransduction: putting all the pieces together again , 2006, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.
[72] Ingo Roeder,et al. Towards an understanding of lineage specification in hematopoietic stem cells: a mathematical model for the interaction of transcription factors GATA-1 and PU.1. , 2006, Journal of theoretical biology.
[73] C. Anthony Hunt,et al. Simulating Properties of In Vitro Epithelial Cell Morphogenesis , 2006, PLoS Comput. Biol..
[74] D. Drasdo,et al. Individual cell‐based models of the spatial‐temporal organization of multicellular systems—Achievements and limitations , 2006, Cytometry. Part A : the journal of the International Society for Analytical Cytology.
[75] Markus Loeffler,et al. Tumorigenesis and Neoplastic Progression Individual Cell-Based Models of Tumor-Environment Interactions Multiple Effects of CD 97 on Tumor Invasion , 2006 .
[76] M. Chaplain,et al. Mathematical modelling of the loss of tissue compression responsiveness and its role in solid tumour development. , 2006, Mathematical medicine and biology : a journal of the IMA.
[77] Sami Alom Ruiz,et al. An inhibitory role for FAK in regulating proliferation: a link between limited adhesion and RhoA-ROCK signaling , 2006, The Journal of cell biology.
[78] Marc Brulport,et al. Mathematical modelling of liver regeneration after intoxication with CCl(4). , 2007, Chemico-biological interactions.
[79] Corinne Laplace-Builhé,et al. The Origin of Phenotypic Heterogeneity in a Clonal Cell Population In Vitro , 2007, PloS one.
[80] S. Hoehme,et al. On the Role of Physics in the Growth and Pattern Formation of Multi-Cellular Systems: What can we Learn from Individual-Cell Based Models? , 2007 .
[81] Tilo Beyer,et al. Modeling emergent tissue organization involving high-speed migrating cells in a flow equilibrium. , 2006, Physical review. E, Statistical, nonlinear, and soft matter physics.
[82] Yi Jiang,et al. A cell-based model exhibiting branching and anastomosis during tumor-induced angiogenesis. , 2007, Biophysical journal.
[83] Michael Cross,et al. Lineage Specification of Hematopoietic Stem Cells: Mathematical Modeling and Biological Implications , 2007, Stem cells.
[84] Gernot Schaller,et al. A modelling approach towards epidermal homoeostasis control. , 2007, Journal of theoretical biology.
[85] S. Jonathan Chapman,et al. Mathematical Models of Avascular Tumor Growth , 2007, SIAM Rev..