Biomolecular resource utilization in elementary cell-free gene circuits
暂无分享,去创建一个
Richard M. Murray | Vincent Noireaux | Dan Siegal-Gaskins | R. Murray | Dan Siegal-Gaskins | V. Noireaux
[1] P. Dennis,et al. Cytoplasmic RNA Polymerase inEscherichia coli , 2001, Journal of bacteriology.
[2] Aaas News,et al. Book Reviews , 1893, Buffalo Medical and Surgical Journal.
[3] D. Gillespie. The chemical Langevin equation , 2000 .
[4] T. Hwa,et al. Interdependence of Cell Growth and Gene Expression: Origins and Consequences , 2010, Science.
[5] Joseph D Puglisi,et al. Quantitative polysome analysis identifies limitations in bacterial cell-free protein synthesis. , 2005, Biotechnology and bioengineering.
[6] V. Shingler,et al. Regulation of alternative sigma factor use. , 2011, Annual review of microbiology.
[7] W. Marsden. I and J , 2012 .
[8] Yu Tanouchi,et al. Oscillations by Minimal Bacterial Suicide Circuits Reveal Hidden Facets of Host-Circuit Physiology , 2010, PloS one.
[9] J. Stelling,et al. Robustness of Cellular Functions , 2004, Cell.
[10] Hidde de Jong,et al. Modeling and Simulation of Genetic Regulatory Systems: A Literature Review , 2002, J. Comput. Biol..
[11] M. di Bernardo,et al. Comparing different ODE modelling approaches for gene regulatory networks. , 2009, Journal of theoretical biology.
[12] Ruth J. Williams,et al. Queueing up for Enzymatic Processing: Correlated Signaling through Coupled Degradation , 2022 .
[13] T. Nyström,et al. Negative regulation by RpoS: a case of sigma factor competition , 1998, Molecular microbiology.
[14] R. Weiss,et al. Advances in synthetic biology: on the path from prototypes to applications. , 2005, Current opinion in biotechnology.
[15] Johannes Jaeger,et al. Parameter estimation and determinability analysis applied to Drosophila gap gene circuits , 2008, BMC Systems Biology.
[16] Adam P Arkin,et al. Versatile RNA-sensing transcriptional regulators for engineering genetic networks , 2011, Proceedings of the National Academy of Sciences.
[17] Barbara M. Bakker,et al. How Molecular Competition Influences Fluxes in Gene Expression Networks , 2011, PloS one.
[18] Dominique Chu,et al. The role of tRNA and ribosome competition in coupling the expression of different mRNAs in Saccharomyces cerevisiae , 2011, Nucleic acids research.
[19] A. Arkin,et al. Contextualizing context for synthetic biology – identifying causes of failure of synthetic biological systems , 2012, Biotechnology journal.
[20] Lee A. Segel,et al. On the validity of the steady state assumption of enzyme kinetics , 1988 .
[21] Michael B. Mathews,et al. Translational control in biology and medicine , 2007 .
[22] R. Bar-Ziv,et al. Principles of cell-free genetic circuit assembly , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[23] Marcel Geertz,et al. Massively parallel measurements of molecular interaction kinetics on a microfluidic platform , 2012, Proceedings of the National Academy of Sciences.
[24] C. Bashor,et al. Rewiring cells: synthetic biology as a tool to interrogate the organizational principles of living systems. , 2010, Annual review of biophysics.
[25] L. Segel,et al. On the validity of the steady state assumption of enzyme kinetics. , 1988, Bulletin of mathematical biology.
[26] Michael C Jewett,et al. Synthetic in vitro circuits. , 2012, Current opinion in chemical biology.
[27] Ruth J. Williams,et al. Correlation resonance generated by coupled enzymatic processing. , 2010, Biophysical journal.
[28] Mads Kaern,et al. The engineering of gene regulatory networks. , 2003, Annual review of biomedical engineering.
[29] Domitilla Del Vecchio,et al. Tuning Genetic Clocks Employing DNA Binding Sites , 2012, PloS one.
[30] Vincent Noireaux,et al. Coarse-grained dynamics of protein synthesis in a cell-free system. , 2011, Physical review letters.
[31] H. Bujard,et al. Promoter recognition and promoter strength in the Escherichia coli system. , 1987, The EMBO journal.
[32] V. Noireaux,et al. An E. coli cell-free expression toolbox: application to synthetic gene circuits and artificial cells. , 2012, ACS synthetic biology.
[33] Vincent Noireaux,et al. Efficient cell-free expression with the endogenous E. Coli RNA polymerase and sigma factor 70 , 2010, Journal of biological engineering.
[34] N. Fujita,et al. Competition among seven Escherichia coli sigma subunits: relative binding affinities to the core RNA polymerase. , 2000, Nucleic acids research.
[35] Y. Rondelez. Competition for catalytic resources alters biological network dynamics. , 2012, Physical review letters.
[36] M. Nomura,et al. Regulation of Ribosome Biosynthesis in Escherichia coli and Saccharomyces cerevisiae: Diversity and Common Principles , 1999, Journal of bacteriology.
[37] L. You,et al. Emergent bistability by a growth-modulating positive feedback circuit. , 2009, Nature chemical biology.
[38] Richard M. Murray,et al. Quantifying crosstalk in biochemical systems , 2012, 2012 IEEE 51st IEEE Conference on Decision and Control (CDC).
[39] M. Jewett,et al. Cell-free synthetic biology: thinking outside the cell. , 2012, Metabolic engineering.
[41] J. Gunawardena. Models in Systems Biology: The Parameter Problem and the Meanings of Robustness , 2010 .