Effect of germ-free status on transcriptional profiles in the nucleus accumbens and transcriptomic response to chronic morphine

[1]  V. Sperandio,et al.  Gut colonization by Proteobacteria alters host metabolism and modulates cocaine neurobehavioral responses. , 2022, Cell host & microbe.

[2]  J. Cryan,et al.  The gut microbiota alone and in combination with a social stimulus regulates cocaine reward in the mouse , 2022, Brain, Behavior, and Immunity.

[3]  Yanjiong Chen,et al.  Alterations in gut microbiota affect behavioral and inflammatory responses to methamphetamine in mice , 2022, Psychopharmacology.

[4]  Sabita Roy,et al.  Opioid Use, Gut Dysbiosis, Inflammation, and the Nervous System , 2022, Journal of Neuroimmune Pharmacology.

[5]  Anne E. Boustead,et al.  Assessment of State and Federal Health Policies for Opioid Use Disorder Treatment During the COVID-19 Pandemic and Beyond. , 2021, JAMA health forum.

[6]  S. Buch,et al.  Protective Role of Lactobacillus rhamnosus Probiotic in Reversing Cocaine-Induced Oxidative Stress, Glial Activation and Locomotion in Mice , 2021, Journal of Neuroimmune Pharmacology.

[7]  D. D. Kiraly,et al.  Alterations in microbiome composition and metabolic byproducts drive behavioral and transcriptional responses to morphine , 2021, Neuropsychopharmacology.

[8]  O. George,et al.  Depletion of the Microbiome Alters the Recruitment of Neuronal Ensembles of Oxycodone Intoxication and Withdrawal , 2020, eNeuro.

[9]  E. Nestler,et al.  Epigenetic Mechanisms of Opioid Addiction , 2020, Biological Psychiatry.

[10]  S. Berger,et al.  ALCOHOL METABOLISM CONTRIBUTES TO BRAIN HISTONE ACETYLATION , 2019, Nature.

[11]  E. Butelman,et al.  Current status of opioid addiction treatment and related preclinical research , 2019, Science Advances.

[12]  Mitchell H. Murdock,et al.  The microbiota regulate neuronal function and fear extinction learning , 2019, Nature.

[13]  Sabita Roy,et al.  Morphine tolerance is attenuated in germfree mice and reversed by probiotics, implicating the role of gut microbiome , 2019, Proceedings of the National Academy of Sciences.

[14]  B. Vervliet,et al.  The role of short-chain fatty acids in microbiota–gut–brain communication , 2019, Nature Reviews Gastroenterology & Hepatology.

[15]  J. Vilo,et al.  g:Profiler: a web server for functional enrichment analysis and conversions of gene lists (2019 update) , 2019, Nucleic Acids Res..

[16]  M. Spencer,et al.  National Vital Statistics Reports: Drugs Most Frequently Involved in Drug Overdose Deaths: United States, 2011-2016 , 2018 .

[17]  Denis Torre,et al.  BioJupies: Automated Generation of Interactive Notebooks for RNA-Seq Data Analysis in the Cloud. , 2018, Cell systems.

[18]  T. Dinan,et al.  Gut microbiome correlates with altered striatal dopamine receptor expression in a model of compulsive alcohol seeking , 2018, Neuropharmacology.

[19]  E. Hsiao,et al.  The gut microbiota mediates reward and sensory responses associated with regimen-selective morphine dependence , 2018, Neuropsychopharmacology.

[20]  T. Dinan,et al.  Social interaction-induced activation of RNA splicing in the amygdala of microbiome-deficient mice , 2018, eLife.

[21]  Sabita Roy,et al.  Morphine induces changes in the gut microbiome and metabolome in a morphine dependence model , 2018, Scientific Reports.

[22]  I. Amit,et al.  Microbiome Influences Prenatal and Adult Microglia in a Sex-Specific Manner , 2017, Cell.

[23]  T. Dinan,et al.  The microbiome regulates amygdala-dependent fear recall , 2017, Molecular Psychiatry.

[24]  Y. Hurd,et al.  Striatal H3K27 Acetylation Linked to Glutamatergic Gene Dysregulation in Human Heroin Abusers Holds Promise as Therapeutic Target , 2017, Biological Psychiatry.

[25]  E. Nestler,et al.  Alterations of the Host Microbiome Affect Behavioral Responses to Cocaine , 2016, Scientific Reports.

[26]  E. Nestler,et al.  Epigenetic Basis of Mental Illness , 2016, The Neuroscientist : a review journal bringing neurobiology, neurology and psychiatry.

[27]  F. Bäckhed,et al.  From Dietary Fiber to Host Physiology: Short-Chain Fatty Acids as Key Bacterial Metabolites , 2016, Cell.

[28]  J. Clemente,et al.  Microbiota-driven transcriptional changes in prefrontal cortex override genetic differences in social behavior , 2016, eLife.

[29]  T. Dinan,et al.  Regulation of prefrontal cortex myelination by the microbiota , 2016, Translational Psychiatry.

[30]  T. Dinan,et al.  Microbes & neurodevelopment – Absence of microbiota during early life increases activity-related transcriptional pathways in the amygdala , 2015, Brain, Behavior, and Immunity.

[31]  I. Amit,et al.  Host microbiota constantly control maturation and function of microglia in the CNS , 2015, Nature Neuroscience.

[32]  Elyssa B. Margolis,et al.  Understanding opioid reward , 2015, Trends in Neurosciences.

[33]  E. Nestler,et al.  Regulation of chromatin states by drugs of abuse , 2015, Current Opinion in Neurobiology.

[34]  Chung-Yen Lin,et al.  cytoHubba: identifying hub objects and sub-networks from complex interactome , 2014, BMC Systems Biology.

[35]  Lai Guan Ng,et al.  The gut microbiota influences blood-brain barrier permeability in mice , 2014, Science Translational Medicine.

[36]  D. Macfabe,et al.  Enteric Bacterial Metabolites Propionic and Butyric Acid Modulate Gene Expression, Including CREB-Dependent Catecholaminergic Neurotransmission, in PC12 Cells - Possible Relevance to Autism Spectrum Disorders , 2014, PloS one.

[37]  B. Graveley,et al.  Effects of cocaine and withdrawal on the mouse nucleus accumbens transcriptome , 2013, Genes, brain, and behavior.

[38]  E. Nestler,et al.  Transcriptional and epigenetic mechanisms of addiction , 2011, Nature Reviews Neuroscience.

[39]  K. Befort,et al.  Reward processing by the opioid system in the brain. , 2009, Physiological reviews.

[40]  Guanghua Xiao,et al.  Genome-wide Analysis of Chromatin Regulation by Cocaine Reveals a Role for Sirtuins , 2009, Neuron.

[41]  S. Horvath,et al.  WGCNA: an R package for weighted correlation network analysis , 2008, BMC Bioinformatics.

[42]  W. Alkema,et al.  BioVenn – a web application for the comparison and visualization of biological lists using area-proportional Venn diagrams , 2008, BMC Genomics.

[43]  D. Schrenk,et al.  Inhibition of histone-deacetylase activity by short-chain fatty acids and some polyphenol metabolites formed in the colon. , 2008, The Journal of nutritional biochemistry.

[44]  Francis Boon,et al.  Neurobiological effects of intraventricular propionic acid in rats: Possible role of short chain fatty acids on the pathogenesis and characteristics of autism spectrum disorders , 2007, Behavioural Brain Research.

[45]  Swati Gandhi,et al.  Stereospecific Regulation of Tyrosine Hydroxylase and Proenkephalin Genes by Short-Chain Fatty Acids in Rat PC12 Cells , 2004, Pediatric Research.

[46]  P. Shannon,et al.  Cytoscape: a software environment for integrated models of biomolecular interaction networks. , 2003, Genome research.

[47]  C. McClung,et al.  Regulation of gene expression and cocaine reward by CREB and ΔFosB , 2003, Nature Neuroscience.

[48]  J. Alvarez‐Leite,et al.  Inhibition of ERK1/2 and CREB phosphorylation by caspase-dependent mechanism enhances apoptosis in a fibrosarcoma cell line treated with butyrate. , 2003, Biochemical and biophysical research communications.

[49]  Thomas R. Gingeras,et al.  STAR: ultrafast universal RNA-seq aligner , 2013, Bioinform..