Inactivation of the ribonucleoside triphosphate reductase from Lactobacillus leichmannii by 2'-chloro-2'-deoxyuridine 5'-triphosphate: a 3'-2' hydrogen transfer during the formation of 3'-keto-2'-deoxyuridine 5'-triphosphate.

The ribonucleoside triphosphate reductase of Lactobacillus leichmannii converts the substrate analogue 2'-chloro-2'-deoxyuridine 5'-triphosphate (ClUTP) into a mixture of 2'-deoxyuridine triphosphate (dUTP) and the unstable product 3'-keto-2'-deoxyuridine triphosphate (3'-keto-dUTP). This ketone can be trapped by reduction with NaBH4, producing a 4:1 mixture of xylo-dUTP and dUTP. When [3'-3H]ClUTP is treated with enzyme in the presence of NaBH4, the isomeric deoxyuridines isolated after alkaline phosphatase treatment retained 15% of the 3H in ClUTP. Degradation of these isomeric nucleosides has established the location of the 3H in 3'-keto-dUTP as predominantly 2'(S). The xylo-dU had 98.6% of its label at the 2'(S) position and 1.5% at 2'(R). The isolated dU had 89.6% of its label at 2'(S) and 1.4% at 2'(R), with the remaining 9% label inferred to be at the 3'-carbon, this resulting from the direct enzymic production of dUTP. These results are consistent with enzymic production of a 1:1000 mixture of dUTP and 3'-keto-dUTP, where the 3'-hydrogen of ClUTP is retained at 3' during production of dUTP and is transferred to 2'(S) during production of 3'-keto-dUTP. The implications of these results and the unique role of the cofactor adenosylcobalamin (Ashley et al., 1986) are discussed in terms of reductase being a model for the B12-dependent rearrangement reactions.

[1]  J. Stubbe,et al.  Inactivation of the Lactobacillus leichmannii ribonucleoside triphosphate reductase by 2'-chloro-2'-deoxyuridine 5'-triphosphate: stoichiometry of inactivation, site of inactivation, and mechanism of the protein chromophore formation. , 1988, Biochemistry.

[2]  J. Stubbe,et al.  Location of the redox-active thiols of ribonucleotide reductase: sequence similarity between the Escherichia coli and Lactobacillus leichmannii enzymes. , 1987, Biochemistry.

[3]  J. Stubbe,et al.  2'-Deoxy-2'-halonucleotides as alternate substrates and mechanism-based inactivators of Lactobacillus leichmannii ribonucleotide reductase. , 1987, Biochemistry.

[4]  T. Stadtman,et al.  Solubilization of a membrane-bound diol dehydratase with retention of EPR g = 2.02 signal by using 2-(N-cyclohexylamino)ethanesulfonic acid buffer. , 1987, Proceedings of the National Academy of Sciences of the United States of America.

[5]  J. Stubbe,et al.  The mechanism of Lactobacillus leichmannii ribonucleotide reductase. Evidence for 3' carbon-hydrogen bond cleavage and a unique role for coenzyme B12. , 1986, The Journal of biological chemistry.

[6]  J. Stubbe,et al.  Mechanism of inactivation of Escherichia coli ribonucleotide reductase by 2'-chloro-2'-deoxyuridine 5'-diphosphate: evidence for generation of a 2'-deoxy-3'-ketonucleotide via a net 1,2 hydrogen shift. , 1985, Biochemistry.

[7]  J. Stubbe Identification of two alpha-ketoglutarate-dependent dioxygenases in extracts of Rhodotorula glutinis catalyzing deoxyuridine hydroxylation. , 1985, The Journal of biological chemistry.

[8]  J. Stubbe,et al.  Current ideas on the chemical mechanism of ribonucleotide reductases. , 1985, Pharmacology & therapeutics.

[9]  J. Stubbe,et al.  Mechanism of inactivation of Escherichia coli and Lactobacillus leichmannii ribonucleotide reductases by 2'-chloro-2'-deoxynucleotides: evidence for generation of 2-methylene-3(2H)-furanone. , 1984, Biochemistry.

[10]  F. Hansske,et al.  2' And 3'-ketonucleosides and their arabino and xylo reduction products: Convenient access via selective protection and oxidation of ribonucleosides☆ , 1984 .

[11]  J. Stubbe,et al.  Interaction of 3'-[3H]2'-Chloro-2'-deoxyuridine 5'-triphosphate with ribonucleotide reductase from Lactobacillus leichmannii. , 1983, Journal of Biological Chemistry.

[12]  W. Cleland Use of isotope effects to elucidate enzyme mechanisms. , 1982, CRC critical reviews in biochemistry.

[13]  J. Stubbe,et al.  On the mechanism of ribonucleoside triphosphate reductase from Lactobacillus leichmannii. Evidence for 3' C--H bond cleavage. , 1981, Journal of Biological Chemistry.

[14]  O. Mitsunobu The Use of Diethyl Azodicarboxylate and Triphenylphosphine in Synthesis and Transformation of Natural Products , 1981 .

[15]  M. Joullié,et al.  Total synthesis of (+)-furanomycin and stereoisomers , 1980 .

[16]  J. Stubbe,et al.  Inorganic pyrophosphate is released from 2'-chloro-2'-deoxyuridine 5'-diphosphate by ribonucleoside diphosphate reductase , 1980 .

[17]  B. Babior,et al.  The mechanism of adenosylcobalamin-dependent reactions. , 1979, CRC critical reviews in biochemistry.

[18]  W. C. Still,et al.  Rapid chromatographic technique for preparative separations with moderate resolution , 1978 .

[19]  L Thelander,et al.  Active site of ribonucleoside diphosphate reductase from Escherichia coli. Inactivation of the enzyme by 2'-substituted ribonucleoside diphosphates. , 1976, The Journal of biological chemistry.

[20]  J. G. Moffatt,et al.  Reactions of 2-acyloxyisobutyryl halides with nucleosides. I. Reactions of model diols and of uridine. , 1973, Journal of the American Chemical Society.

[21]  P. Frey,et al.  Studies on the mechanism of hydrogen transfer in the coenzyme B12 dependent dioldehydrase reaction II. , 1971 .