Sex Chromosome Dosage Compensation in Heliconius Butterflies: Global yet Still Incomplete?
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[1] Thomas J. Hardcastle. Generalised empirical Bayesian methods for discovery of differential data in high-throughput biology , 2015, bioRxiv.
[2] Jianzhi Zhang,et al. No X-chromosome dosage compensation in human proteomes. , 2015, Molecular biology and evolution.
[3] Peter W. Harrison,et al. Sexual selection drives evolution and rapid turnover of male gene expression , 2015, Proceedings of the National Academy of Sciences.
[4] S. Bottani,et al. X chromosome inactivation and active X upregulation in therian mammals: facts, questions, and hypotheses. , 2015, Journal of molecular cell biology.
[5] D. Bachtrog,et al. Partial Dosage Compensation in Strepsiptera, a Sister Group of Beetles , 2015, Genome biology and evolution.
[6] Liisa Holm,et al. The Glanville fritillary genome retains an ancient karyotype and reveals selective chromosomal fusions in Lepidoptera , 2014, Nature Communications.
[7] A. Kawahara,et al. Phylogenomics provides strong evidence for relationships of butterflies and moths , 2014, Proceedings of the Royal Society B: Biological Sciences.
[8] Michael J Sailor,et al. Mesoporous silicon sponge as an anti-pulverization structure for high-performance lithium-ion battery anodes , 2014, Nature Communications.
[9] D. Bates,et al. Fitting Linear Mixed-Effects Models Using lme4 , 2014, 1406.5823.
[10] Sumio Sugano,et al. A single female-specific piRNA is the primary determiner of sex in the silkworm , 2014, Nature.
[11] T. Gojobori,et al. Tissue- and stage-dependent dosage compensation on the neo-X chromosome in Drosophila pseudoobscura. , 2014, Molecular biology and evolution.
[12] Yun-Ru Chen,et al. Complete Dosage Compensation and Sex-Biased Gene Expression in the Moth Manduca sexta , 2014, Genome biology and evolution.
[13] Peter W. Harrison,et al. The Ontogeny and Evolution of Sex-Biased Gene Expression in Drosophila melanogaster , 2014, Molecular biology and evolution.
[14] P. Park,et al. Transcriptional control of a whole chromosome: emerging models for dosage compensation , 2014, Nature Structural &Molecular Biology.
[15] J. Mank. Sex chromosome dosage compensation: definitely not for everyone. , 2013, Trends in genetics : TIG.
[16] S. Allen,et al. The Genomic Distribution of Sex-Biased Genes in Drosophila serrata: X Chromosome Demasculinization, Feminization, and Hyperexpression in Both Sexes , 2013, Genome biology and evolution.
[17] Simon H. Martin,et al. Genome-wide evidence for speciation with gene flow in Heliconius butterflies , 2013, Genome research.
[18] J. Nagaraju,et al. Large Scale Full-Length cDNA Sequencing Reveals a Unique Genomic Landscape in a Lepidopteran Model Insect, Bombyx mori , 2013, G3: Genes, Genomes, Genetics.
[19] J. J. Emerson,et al. Comparative Sex Chromosome Genomics in Snakes: Differentiation, Evolutionary Strata, and Lack of Global Dosage Compensation , 2013, PLoS biology.
[20] Simon H. Martin,et al. Female Behaviour Drives Expression and Evolution of Gustatory Receptors in Butterflies , 2013, PLoS genetics.
[21] Lei Xie,et al. Multiscale modeling of the causal functional roles of nsSNPs in a genome-wide association study: application to hypoxia , 2013, BMC Genomics.
[22] V. B. Kaiser,et al. Sex-biased gene expression at homomorphic sex chromosomes in emus and its implication for sex chromosome evolution , 2013, Proceedings of the National Academy of Sciences.
[23] Cynthia Parr,et al. A Large-Scale, Higher-Level, Molecular Phylogenetic Study of the Insect Order Lepidoptera (Moths and Butterflies) , 2013, PloS one.
[24] R. O’Neill,et al. Determination of dosage compensation of the mammalian X chromosome by RNA-seq is dependent on analytical approach , 2013, BMC Genomics.
[25] J. Parsch,et al. The evolutionary causes and consequences of sex-biased gene expression , 2013, Nature Reviews Genetics.
[26] D. Bachtrog,et al. Y-chromosome evolution: emerging insights into processes of Y-chromosome degeneration , 2013, Nature Reviews Genetics.
[27] I. Rigoutsos,et al. The complex transcriptional landscape of the anucleate human platelet , 2013, BMC Genomics.
[28] Jian Wang,et al. A heterozygous moth genome provides insights into herbivory and detoxification , 2013, Nature Genetics.
[29] J. Parsch,et al. Population and sex differences in Drosophila melanogaster brain gene expression , 2012, BMC Genomics.
[30] C. Disteche. Dosage compensation of the sex chromosomes. , 2012, Annual review of genetics.
[31] Peter W. Harrison,et al. Incomplete Sex Chromosome Dosage Compensation in the Indian Meal Moth, Plodia interpunctella, Based on De Novo Transcriptome Assembly , 2012, Genome biology and evolution.
[32] S. Bensch,et al. Sex-Biased Gene Expression on the Avian Z Chromosome: Highly Expressed Genes Show Higher Male-Biased Expression , 2012, PloS one.
[33] Jianzhi Zhang,et al. Expression reduction in mammalian X chromosome evolution refutes Ohno’s hypothesis of dosage compensation , 2012, Proceedings of the National Academy of Sciences.
[34] A. Clark,et al. Disentangling the relationship between sex-biased gene expression and X-linkage , 2012, Genome research.
[35] Frank Grützner,et al. Mechanisms and Evolutionary Patterns of Mammalian and Avian Dosage Compensation , 2012, PLoS biology.
[36] Simon H. Martin,et al. Butterfly genome reveals promiscuous exchange of mimicry adaptations among species , 2012, Nature.
[37] Steven L Salzberg,et al. Fast gapped-read alignment with Bowtie 2 , 2012, Nature Methods.
[38] Thomas J. Hardcastle,et al. Identifying small interfering RNA loci from high-throughput sequencing data , 2012, Bioinform..
[39] Joseph B Hiatt,et al. Evidence for compensatory upregulation of expressed X-linked genes in mammals, Caenorhabditis elegans and Drosophila melanogaster , 2011, Nature Genetics.
[40] B. Turner,et al. Relative overexpression of X-linked genes in mouse embryonic stem cells is consistent with Ohno's hypothesis , 2011, Nature Genetics.
[41] P. Park,et al. Evidence for dosage compensation between the X chromosome and autosomes in mammals , 2011, Nature Genetics.
[42] M. Kirkpatrick,et al. Are all sex chromosomes created equal? , 2011, Trends in genetics : TIG.
[43] Colin N. Dewey,et al. RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome , 2011, BMC Bioinformatics.
[44] J. Mank,et al. SOME INCONVENIENT TRUTHS ABOUT SEX CHROMOSOME DOSAGE COMPENSATION AND THE POTENTIAL ROLE OF SEXUAL CONFLICT , 2011, Evolution; international journal of organic evolution.
[45] Thomas J. Hardcastle,et al. Getting a Full Dose? Reconsidering Sex Chromosome Dosage Compensation in the Silkworm, Bombyx mori , 2011, Genome biology and evolution.
[46] T. Straub,et al. Transcription modulation chromosome-wide: universal features and principles of dosage compensation in worms and flies. , 2011, Current opinion in genetics & development.
[47] D. Bachtrog,et al. Lack of Global Dosage Compensation in Schistosoma mansoni, a Female-Heterogametic Parasite , 2011, Genome biology and evolution.
[48] S. Bensch,et al. The sex-biased brain: sexual dimorphism in gene expression in two species of songbirds , 2011, BMC Genomics.
[49] Jianzhi Zhang,et al. RNA sequencing shows no dosage compensation of the active X-chromosome , 2010, Nature Genetics.
[50] A. Clark,et al. SEX LINKAGE, SEX‐SPECIFIC SELECTION, AND THE ROLE OF RECOMBINATION IN THE EVOLUTION OF SEXUALLY DIMORPHIC GENE EXPRESSION , 2010, Evolution; international journal of organic evolution.
[51] Thomas J. Hardcastle,et al. baySeq: Empirical Bayesian methods for identifying differential expression in sequence count data , 2010, BMC Bioinformatics.
[52] Jeffery P. Demuth,et al. Hyperexpression of the X Chromosome in Both Sexes Results in Extensive Female Bias of X-Linked Genes in the Flour Beetle , 2010, Genome biology and evolution.
[53] C. Marshall,et al. Dissecting comimetic radiations in Heliconius reveals divergent histories of convergent butterflies , 2010, Proceedings of the National Academy of Sciences.
[54] A. Arnold,et al. Sex bias and dosage compensation in the zebra finch versus chicken genomes: general and specialized patterns among birds. , 2010, Genome research.
[55] Sandrine Dudoit,et al. Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments , 2010, BMC Bioinformatics.
[56] D. Bachtrog,et al. Progress and prospects toward our understanding of the evolution of dosage compensation , 2009, Chromosome Research.
[57] J. Nagaraju,et al. The Silkworm Z Chromosome Is Enriched in Testis-Specific Genes , 2009, Genetics.
[58] J. Mank. The W, X, Y and Z of sex-chromosome dosage compensation. , 2009, Trends in genetics : TIG.
[59] Q. Xia,et al. Dosage analysis of Z chromosome genes using microarray in silkworm, Bombyx mori. , 2009, Insect biochemistry and molecular biology.
[60] J. Mank,et al. All dosage compensation is local: Gene-by-gene regulation of sex-biased expression on the chicken Z chromosome , 2009, Heredity.
[61] B. Williams,et al. Mapping and quantifying mammalian transcriptomes by RNA-Seq , 2008, Nature Methods.
[62] K. Kultima,et al. Faced with inequality: chicken do not have a general dosage compensation of sex-linked genes , 2007, BMC Biology.
[63] Simon W. Baxter,et al. Synteny and Chromosome Evolution in the Lepidoptera: Evidence From Mapping in Heliconius melpomene , 2007, Genetics.
[64] Hans Ellegren,et al. The evolution of sex-biased genes and sex-biased gene expression , 2007, Nature Reviews Genetics.
[65] Zhonghuai Xiang,et al. Microarray-based gene expression profiles in multiple tissues of the domesticated silkworm, Bombyx mori , 2007, Genome Biology.
[66] A. Arnold,et al. Dosage compensation is less effective in birds than in mammals , 2007, Journal of biology.
[67] D. Bachtrog. A dynamic view of sex chromosome evolution. , 2006, Current opinion in genetics & development.
[68] H. Ellegren,et al. NONRANDOM DISTRIBUTION OF GENES WITH SEX-BIASED EXPRESSION IN THE CHICKEN GENOME , 2006, Evolution; international journal of organic evolution.
[69] H. Ellegren,et al. NONRANDOM DISTRIBUTION OF GENES WITH SEX‐BIASED EXPRESSION IN THE CHICKEN GENOME , 2006 .
[70] A. Arnold,et al. Tissue-specific expression and regulation of sexually dimorphic genes in mice. , 2006, Genome research.
[71] J. Malley,et al. Global analysis of X-chromosome dosage compensation , 2006, Journal of biology.
[72] Peter J Park,et al. Global regulation of X chromosomal genes by the MSL complex in Drosophila melanogaster. , 2005, Genes & development.
[73] B. Meyer. X-Chromosome dosage compensation. , 2005, WormBook : the online review of C. elegans biology.
[74] R. Camerini-Otero,et al. The mouse X chromosome is enriched for sex-biased genes not subject to selection by meiotic sex chromosome inactivation , 2004, Nature Genetics.
[75] J. Birchler,et al. Dosage-dependent gene regulation in multicellular eukaryotes: implications for dosage compensation, aneuploid syndromes, and quantitative traits. , 2001, Developmental biology.
[76] B. Charlesworth,et al. The degeneration of Y chromosomes. , 2000, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.
[77] V. Reinke,et al. A global profile of germline gene expression in C. elegans. , 2000, Molecular cell.
[78] V. Lukhtanov. Sex chromatin and sex chromosome systems in nonditrysian Lepidoptera (Insecta) , 2000 .
[79] F. Marec,et al. Sex Chromatin in Lepidoptera , 1996, The Quarterly Review of Biology.
[80] B. Charlesworth,et al. The evolution of chromosomal sex determination and dosage compensation , 1996, Current Biology.
[81] W. Rice. SEX CHROMOSOMES AND THE EVOLUTION OF SEXUAL DIMORPHISM , 1984, Evolution; international journal of organic evolution.
[82] B. Charlesworth. Model for evolution of Y chromosomes and dosage compensation. , 1978, Proceedings of the National Academy of Sciences of the United States of America.
[83] L. Gilbert,et al. Ovarian Dynamics in Heliconiine Butterflies: Programmed Senescence versus Eternal Youth , 1977, Science.
[84] J. Hoo. EVOLUTION OF X-CHROMOSOME INACTIVATION , 1976, The Lancet.
[85] R. W. C. Stevens,et al. Sex chromosomes and sex-linked genes. , 1968 .
[86] R Core Team,et al. R: A language and environment for statistical computing. , 2014 .
[87] G. Marais,et al. The evolution of X chromosome inactivation in mammals: the demise of Ohno’s hypothesis? , 2013, Cellular and Molecular Life Sciences.
[88] K. Sahara,et al. Sex chromosome evolution in moths and butterflies , 2011, Chromosome Research.
[89] S. Bensch,et al. Why does dosage compensation differ between XY and ZW taxa? , 2010, Trends in genetics : TIG.
[90] C. Disteche,et al. Dosage compensation of the active X chromosome , 2009 .
[91] D. Adler,et al. Mouse X chromosome , 2009, Mammalian Genome.
[92] Christine M Disteche,et al. Dosage compensation of the active X chromosome in mammals , 2006, Nature Genetics.
[93] R. Seeley,et al. How diabetes went to our heads , 2006, Nature Medicine.
[94] D. Frayer. SEXUAL DIMORPHISM , 2005 .
[95] Dr. Susumu Ohno. Sex Chromosomes and Sex-Linked Genes , 1967, Monographs on Endocrinology.
[96] Fitting linear mixed-effects models , 2022 .