Self-Paced Learning for Automatic Prostate Segmentation on MR Images with Hierarchical Boundary Sensitive Network

Accurate segmentation of Magnetic Resonance (MR) on prostate is an essential step for robotics surgery in prostate cancer treatment planning. This paper proposes a Hierarchical Boundary Sensitive Residual U-net (HBS-RUnet) model with self-paced learning strategy for prostate segmentation in MR image. Instead of regarding the segmentation task independently, our network consists of two branches: one segmentation branch detects the prostate region and the boundary branch finds prostate shape. The outputs of boundary branch are employed to refine the HBS-RUnet model by adding a boundary regularization, which helps to find desirable and spatially consistent prostate region. Moreover, a hierarchical dynamic self-paced learning strategy is proposed to measure the difficulty for each prostate image and gradually select the relatively simpler samples for model training. Such a simple-to-complex learning strategy could robustly learn image features and enable the robust prostate segmentation. We applied 66 cases from the PROSTATEx Challenge to evaluate the robustness and effectiveness of the proposed HBS-RUnet, and our fully automatic segmentation results demonstrate high consistency (DSC 87.1%) with the manual segmentation results by experienced physicians.

[1]  P ? ? ? ? ? ? ? % ? ? ? ? , 1991 .

[2]  Hong Zhao,et al.  Hierarchical prostate MRI segmentation via level set clustering with shape prior , 2017, Neurocomputing.

[3]  Geoffrey E. Hinton,et al.  ImageNet classification with deep convolutional neural networks , 2012, Commun. ACM.

[4]  Deyu Meng,et al.  Co-Saliency Detection via a Self-Paced Multiple-Instance Learning Framework , 2017, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[5]  David Dagan Feng,et al.  Atlas registration and ensemble deep convolutional neural network-based prostate segmentation using magnetic resonance imaging , 2018, Neurocomputing.

[6]  Thomas Brox,et al.  U-Net: Convolutional Networks for Biomedical Image Segmentation , 2015, MICCAI.

[7]  Joachim M. Buhmann,et al.  Prostate MRI Segmentation Using Learned Semantic Knowledge and Graph Cuts , 2014, IEEE Transactions on Biomedical Engineering.

[9]  Qingjie Liu,et al.  Road Extraction by Deep Residual U-Net , 2017, IEEE Geoscience and Remote Sensing Letters.

[10]  Seyed-Ahmad Ahmadi,et al.  V-Net: Fully Convolutional Neural Networks for Volumetric Medical Image Segmentation , 2016, 2016 Fourth International Conference on 3D Vision (3DV).

[11]  Tian Liu,et al.  Deeply supervised 3D fully convolutional networks with group dilated convolution for automatic MRI prostate segmentation , 2019, Medical physics.

[12]  Lei Xing,et al.  Prostate Segmentation with Encoder-Decoder Densely Connected Convolutional Network (Ed-Densenet) , 2019, 2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019).

[13]  Bo Du,et al.  Deeply-supervised CNN for prostate segmentation , 2017, 2017 International Joint Conference on Neural Networks (IJCNN).

[14]  Lei Zhang,et al.  Active Self-Paced Learning for Cost-Effective and Progressive Face Identification , 2017, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[15]  Bram van Ginneken,et al.  A survey on deep learning in medical image analysis , 2017, Medical Image Anal..

[16]  N. Dubrawsky Cancer statistics , 1989, CA: a cancer journal for clinicians.

[17]  Noel E. O'Connor,et al.  A Deep Residual Architecture for Skin Lesion Segmentation , 2018, OR 2.0/CARE/CLIP/ISIC@MICCAI.

[18]  Nico Karssemeijer,et al.  Computer-Aided Detection of Prostate Cancer in MRI , 2014, IEEE Transactions on Medical Imaging.

[19]  G. G. Stokes "J." , 1890, The New Yale Book of Quotations.

[20]  Maoguo Gong,et al.  Self-paced Convolutional Neural Networks , 2017, IJCAI.

[21]  Hao Chen,et al.  DCAN: Deep contour‐aware networks for object instance segmentation from histology images , 2017, Medical Image Anal..

[22]  Xiangxiang Zhu,et al.  Improved self-paced learning framework for nonnegative matrix factorization , 2017, Pattern Recognit. Lett..

[23]  Bhavya Ajani,et al.  Automatic and interactive prostate segmentation in MRI using learned contexts on a sparse graph template , 2017, 2017 IEEE 14th International Symposium on Biomedical Imaging (ISBI 2017).

[24]  Yu Qiao,et al.  Prostate Segmentation using 2D Bridged U-net , 2019, 2019 International Joint Conference on Neural Networks (IJCNN).

[25]  Deyu Meng,et al.  Easy Samples First: Self-paced Reranking for Zero-Example Multimedia Search , 2014, ACM Multimedia.

[26]  Sangkeun Lee,et al.  Prostate detection and segmentation based on convolutional neural network and topological derivative , 2017, 2017 IEEE International Conference on Image Processing (ICIP).

[27]  Trevor Darrell,et al.  Fully Convolutional Networks for Semantic Segmentation , 2017, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[28]  Daphne Koller,et al.  Self-Paced Learning for Latent Variable Models , 2010, NIPS.

[29]  A. Jemal,et al.  Cancer statistics, 2020 , 2020, CA: a cancer journal for clinicians.