Unique and Conserved Features of Genome and Proteome of SARS-coronavirus, an Early Split-off From the Coronavirus Group 2 Lineage
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Y. Guan | L. Poon | J. Ziebuhr | A. Gorbalenya | M. Rozanov | V. Thiel | E. Snijder | W. Spaan | P. Bredenbeek | J. C. Dobbe
[1] A. Gorbalenya,et al. A comparative sequence analysis to revise the current taxonomy of the family Coronaviridae , 2003, Archives of Virology.
[2] Alexander E Gorbalenya,et al. Mechanisms and enzymes involved in SARS coronavirus genome expression. , 2003, The Journal of general virology.
[3] Rolf Hilgenfeld,et al. Coronavirus Main Proteinase (3CLpro) Structure: Basis for Design of Anti-SARS Drugs , 2003, Science.
[4] Christian Drosten,et al. Characterization of a Novel Coronavirus Associated with Severe Acute Respiratory Syndrome , 2003, Science.
[5] Obi L. Griffith,et al. The Genome Sequence of the SARS-Associated Coronavirus , 2003, Science.
[6] Christian Drosten,et al. Identification of a novel coronavirus in patients with severe acute respiratory syndrome. , 2003, The New England journal of medicine.
[7] J. A. Comer,et al. A novel coronavirus associated with severe acute respiratory syndrome. , 2003, The New England journal of medicine.
[8] Y. Guan,et al. Coronavirus as a possible cause of severe acute respiratory syndrome , 2003, The Lancet.
[9] I. Bozzoni,et al. Purification, Cloning, and Characterization of XendoU, a Novel Endoribonuclease Involved in Processing of Intron-encoded Small Nucleolar RNAs in Xenopus laevis * , 2003, The Journal of Biological Chemistry.
[10] Jakub Pas,et al. Molecular phylogenetics of the RrmJ/fibrillarin superfamily of ribose 2'-O-methyltransferases. , 2003, Gene.
[11] A. Sasseville,et al. Sequence of the 3'-terminal end (8.1 kb) of the genome of porcine haemagglutinating encephalomyelitis virus: comparison with other haemagglutinating coronaviruses. , 2002, The Journal of general virology.
[12] Jean-Louis Romette,et al. An RNA cap (nucleoside‐2′‐O‐)‐methyltransferase in the flavivirus RNA polymerase NS5: crystal structure and functional characterization , 2002, The EMBO journal.
[13] W. Filipowicz,et al. Biogenesis of small nucleolar ribonucleoproteins. , 2002, Current opinion in cell biology.
[14] P. Rottier,et al. The Group-Specific Murine Coronavirus Genes Are Not Essential, but Their Deletion, by Reverse Genetics, Is Attenuating in the Natural Host , 2002, Virology.
[15] K. Bienz,et al. RNA Replication of Mouse Hepatitis Virus Takes Place at Double-Membrane Vesicles , 2002, Journal of Virology.
[16] J. Ziebuhr,et al. Mutational analysis of the active centre of coronavirus 3C-like proteases. , 2002, The Journal of general virology.
[17] Benjamin A. Shoemaker,et al. CDD: a database of conserved domain alignments with links to domain three-dimensional structure , 2002, Nucleic Acids Res..
[18] E. Snijder,et al. Sequence requirements for RNA strand transfer during nidovirus discontinuous subgenomic RNA synthesis , 2001, The EMBO journal.
[19] A. Gorbalenya,et al. Comparison of genomic and predicted amino acid sequences of respiratory and enteric bovine coronaviruses isolated from the same animal with fatal shipping pneumonia. , 2001, The Journal of general virology.
[20] Alexander E. Gorbalenya,et al. The Autocatalytic Release of a Putative RNA Virus Transcription Factor from Its Polyprotein Precursor Involves Two Paralogous Papain-like Proteases That Cleave the Same Peptide Bond* , 2001, The Journal of Biological Chemistry.
[21] M. Deutscher,et al. Exoribonuclease superfamilies: structural analysis and phylogenetic distribution. , 2001, Nucleic acids research.
[22] A. Gorbalenya,et al. A zinc finger-containing papain-like protease couples subgenomic mRNA synthesis to genome translation in a positive-stranded RNA virus. , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[23] Alexander E. Gorbalenya,et al. Big Nidovirus Genome , 2001 .
[24] A. Gorbalenya,et al. Big nidovirus genome. When count and order of domains matter. , 2001, Advances in experimental medicine and biology.
[25] J. Arnold,et al. The broad-spectrum antiviral ribonucleoside ribavirin is an RNA virus mutagen , 2000, Nature Network Boston.
[26] B. Matthews,et al. Structure of Escherichia coli exonuclease I suggests how processivity is achieved , 2000, Nature Structural Biology.
[27] S. Baker,et al. Identification of Mouse Hepatitis Virus Papain-Like Proteinase 2 Activity , 2000, Journal of Virology.
[28] E. Fauman,et al. RNA methylation under heat shock control. , 2000, Molecular cell.
[29] J. Ziebuhr,et al. The human coronavirus 229E superfamily 1 helicase has RNA and DNA duplex-unwinding activities with 5'-to-3' polarity. , 2000, RNA: A publication of the RNA Society.
[30] A. Gorbalenya,et al. The Predicted Metal-Binding Region of the Arterivirus Helicase Protein Is Involved in Subgenomic mRNA Synthesis, Genome Replication, and Virion Biogenesis , 2000, Journal of Virology.
[31] W. Filipowicz,et al. Characterization of the Saccharomyces cerevisiae cyclic nucleotide phosphodiesterase involved in the metabolism of ADP-ribose 1",2"-cyclic phosphate. , 2000, Nucleic acids research.
[32] J. Ziebuhr,et al. Virus-encoded proteinases and proteolytic processing in the Nidovirales. , 2000, The Journal of general virology.
[33] T. Jukes,et al. The neutral theory of molecular evolution. , 2000, Genetics.
[34] L. F. Ng,et al. Identification of a Novel Cleavage Activity of the First Papain-Like Proteinase Domain Encoded by Open Reading Frame 1a of the Coronavirus Avian Infectious Bronchitis Virus and Characterization of the Cleavage Products , 2000, Journal of Virology.
[35] D. Boisvert,et al. Crystal structure of a fibrillarin homologue from Methanococcus jannaschii, a hyperthermophile, at 1.6 Å resolution , 2000, The EMBO journal.
[36] C. Ponting,et al. Evolution of domain families. , 2000, Advances in protein chemistry.
[37] J. Ziebuhr,et al. The human coronavirus 229 E superfamily 1 helicase has RNA and DNA duplex-unwinding activities with 5 9-to-3 9 polarity , 2000 .
[38] S. Fields,et al. A biochemical genomics approach for identifying genes by the activity of their products. , 1999, Science.
[39] P. Mitchell,et al. Functions of the exosome in rRNA, snoRNA and snRNA synthesis , 1999, The EMBO journal.
[40] S. Schleich,et al. Localization of Mouse Hepatitis Virus Nonstructural Proteins and RNA Synthesis Indicates a Role for Late Endosomes in Viral Replication , 1999, Journal of Virology.
[41] A. Gorbalenya,et al. A Human RNA Viral Cysteine Proteinase That Depends upon a Unique Zn2+-binding Finger Connecting the Two Domains of a Papain-like Fold , 1999, The Journal of Biological Chemistry.
[42] C. Stephensen,et al. Phylogenetic analysis of a highly conserved region of the polymerase gene from 11 coronaviruses and development of a consensus polymerase chain reaction assay , 1999, Virus Research.
[43] Burkhard Morgenstern,et al. DIALIGN2: Improvement of the segment to segment approach to multiple sequence alignment , 1999, German Conference on Bioinformatics.
[44] T. Steitz,et al. Structures of normal single-stranded DNA and deoxyribo-3'-S-phosphorothiolates bound to the 3'-5' exonucleolytic active site of DNA polymerase I from Escherichia coli. , 1999, Biochemistry.
[45] Robert D. Finn,et al. Pfam 3.1: 1313 multiple alignments and profile HMMs match the majority of proteins , 1999, Nucleic Acids Res..
[46] Hong Li,et al. tRNA Splicing* , 1998, The Journal of Biological Chemistry.
[47] Michael Gribskov,et al. Combining evidence using p-values: application to sequence homology searches , 1998, Bioinform..
[48] J. Thompson,et al. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. , 1997, Nucleic acids research.
[49] Thomas L. Madden,et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. , 1997, Nucleic acids research.
[50] P. D. Nagy,et al. New insights into the mechanisms of RNA recombination. , 1997, Virology.
[51] D. Brian,et al. Bovine coronavirus I protein synthesis follows ribosomal scanning on the bicistronic N mRNA , 1997, Virus Research.
[52] K. Nicholas,et al. GeneDoc: Analysis and visualization of genetic variation , 1997 .
[53] Roderic D. M. Page,et al. TreeView: an application to display phylogenetic trees on personal computers , 1996, Comput. Appl. Biosci..
[54] S. Eddy. Hidden Markov models. , 1996, Current opinion in structural biology.
[55] S. Sawicki,et al. Coronaviruses use discontinuous extension for synthesis of subgenome-length negative strands. , 1995, Advances in experimental medicine and biology.
[56] H. Klenk,et al. The Coronaviridae , 1995, The Viruses.
[57] S. Henikoff,et al. Position-based sequence weights. , 1994, Journal of molecular biology.
[58] W. Filipowicz,et al. tRNA splicing in yeast and wheat germ. A cyclic phosphodiesterase implicated in the metabolism of ADP-ribose 1",2"-cyclic phosphate. , 1994, The Journal of biological chemistry.
[59] K. Kousoulas,et al. Biological and genetic characterization of a hemagglutinating coronavirus isolated from a diarrhoeic child , 1994, Journal of medical virology.
[60] R. Baric,et al. Coronaviruses , 2011, Advances in Experimental Medicine and Biology.
[61] Marian C. Horzinek,et al. Toroviruses: replication, evolution and comparison with other members of the coronavirus-like superfamily. , 1993, The Journal of general virology.
[62] E. Koonin,et al. Identification of the catalytic sites of a papain-like cysteine proteinase of murine coronavirus , 1993, Journal of virology.
[63] D. Brian,et al. Leader-mRNA Junction Sequences Are Unique for Each Subgenomic mRNA Species in the Bovine Coronavirus and Remain So Throughout Persistent Infection , 1993, Virology.
[64] S. Inglis,et al. Internal entry of ribosomes on a tricistronic mRNA encoded by infectious bronchitis virus , 1992, Journal of virology.
[65] Eugene V. Koonin,et al. Putative papain‐related thiol proteases of positive‐strand RNA viruses Identification of rubi‐ and aphthovirus proteases and delineation of a novel conserved domain associated with proteases of rubi‐, α‐ and coronaviruses , 1991, FEBS Letters.
[66] J. D. den Boon,et al. Another triple-spanning envelope protein among intracellularly budding RNA viruses: The torovirus E protein , 1991, Virology.
[67] J. D. den Boon,et al. Equine arteritis virus is not a togavirus but belongs to the coronaviruslike superfamily , 1991, Journal of virology.
[68] J. D. den Boon,et al. Comparison of the genome organization of toro- and coronaviruses: Evidence for two nonhomologous RNA recombination events during berne virus evolution , 1991, Virology.
[69] J. D. den Boon,et al. Primary structure and post-translational processing of the berne virus peplomer protein☆ , 1990, Virology.
[70] J. D. den Boon,et al. The carboxyl-terminal part of the putative Berne virus polymerase is expressed by ribosomal frameshifting and contains sequence motifs which indicate that toro- and coronaviruses are evolutionarily related. , 1990, Nucleic acids research.
[71] Marian C. Horzinek,et al. Identification and stability of a 30-kDa nonstructural protein encoded by mRNA 2 of mouse hepatitis virus in infected cells , 1990, Virology.
[72] F. Gebauer,et al. Antigenic homology among coronaviruses related to transmissible gastroenteritis virus , 1990, Virology.
[73] L. Blanco,et al. A conserved 3′→5′ exonuclease active site in prokaryotic and eukaryotic DNA polymerases , 1989, Cell.
[74] D. Brian,et al. Coronavirus subgenomic minus-strand RNAs and the potential for mRNA replicons. , 1989, Proceedings of the National Academy of Sciences of the United States of America.
[75] V. Blinov,et al. Coronavirus genome: prediction of putative functional domains in the non-structural polyprotein by comparative amino acid sequence analysis. , 1989, Nucleic acids research.
[76] I. Brierley,et al. Characterization of an efficient coronavirus ribosomal frameshifting signal: Requirement for an RNA pseudoknot , 1989, Cell.
[77] N. Saitou,et al. The neighbor-joining method: a new method for reconstructing phylogenetic trees. , 1987, Molecular biology and evolution.
[78] T. Brown,et al. Completion of the sequence of the genome of the coronavirus avian infectious bronchitis virus. , 1987, The Journal of general virology.