Alternative SET/TAFI Promoters Regulate Embryonic Stem Cell Differentiation

[1]  R. B. Redmon,et al.  Identity , 2021, Notre Dame J. Formal Log..

[2]  U. Alon,et al.  An Endogenously Tagged Fluorescent Fusion Protein Library in Mouse Embryonic Stem Cells , 2017, Stem cell reports.

[3]  B. Honig,et al.  Acetylation-regulated interaction between p53 and SET reveals a widespread regulatory mode , 2016, Nature.

[4]  E. Meshorer,et al.  Systematic identification of gene family regulators in mouse and human embryonic stem cells , 2016, Nucleic acids research.

[5]  Yingming Zhao,et al.  Foxd3 Promotes Exit from Naive Pluripotency through Enhancer Decommissioning and Inhibits Germline Specification. , 2016, Cell stem cell.

[6]  Howard Y. Chang,et al.  The histone chaperone CAF-1 safeguards somatic cell identity , 2015, Nature.

[7]  Eran Meshorer,et al.  BindDB: An Integrated Database and Webtool Platform for "Reverse-ChIP" Epigenomic Analysis. , 2015, Cell stem cell.

[8]  Jayantha Gunaratne,et al.  ELABELA Is an Endogenous Growth Factor that Sustains hESC Self-Renewal via the PI3K/AKT Pathway. , 2015, Cell stem cell.

[9]  Shane J. Neph,et al.  A comparative encyclopedia of DNA elements in the mouse genome , 2014, Nature.

[10]  Remco Loos,et al.  Citrullination regulates pluripotency and histone H1 binding to chromatin , 2014, Nature.

[11]  B. Turner,et al.  The histone deacetylase inhibitor sodium valproate causes limited transcriptional change in mouse embryonic stem cells but selectively overrides Polycomb-mediated Hoxb silencing , 2013, Epigenetics & Chromatin.

[12]  Patrick J. Paddison,et al.  Exit from Pluripotency Is Gated by Intracellular Redistribution of the bHLH Transcription Factor Tfe3 , 2013, Cell.

[13]  Yunhong Zha,et al.  Functional Dissection of HOXD Cluster Genes in Regulation of Neuroblastoma Cell Proliferation and Differentiation , 2012, PloS one.

[14]  Lee E. Edsall,et al.  A map of the cis-regulatory sequences in the mouse genome , 2012, Nature.

[15]  E. Rand,et al.  Histone modifications and lamin A regulate chromatin protein dynamics in early embryonic stem cell differentiation , 2012, Nature Communications.

[16]  K. Nagata,et al.  Role of Template Activating Factor-I as a chaperone in linker histone dynamics , 2011, Journal of Cell Science.

[17]  J. Collins,et al.  Genomic approaches to deconstruct pluripotency. , 2011, Annual review of genomics and human genetics.

[18]  Juan Carlos Izpisua Belmonte,et al.  Waves of early transcriptional activation and pluripotency program initiation during human preimplantation development , 2011, Development.

[19]  E. Meshorer,et al.  H3K9 histone acetylation predicts pluripotency and reprogramming capacity of ES cells , 2011, Nucleus.

[20]  E. Meshorer,et al.  Photobleaching assays (FRAP & FLIP) to measure chromatin protein dynamics in living embryonic stem cells. , 2011, Journal of visualized experiments : JoVE.

[21]  N. Avvakumov,et al.  Histone chaperones: modulators of chromatin marks. , 2011, Molecular cell.

[22]  G. Crabtree,et al.  Chromatin regulatory mechanisms in pluripotency. , 2010, Annual review of cell and developmental biology.

[23]  Christopher B. Burge,et al.  c-Myc Regulates Transcriptional Pause Release , 2010, Cell.

[24]  Michael T. McManus,et al.  Chd1 regulates open chromatin and pluripotency of embryonic stem cells , 2009, Nature.

[25]  Ian Chambers,et al.  The transcriptional foundation of pluripotency , 2009, Development.

[26]  Alexey I Nesvizhskii,et al.  An embryonic stem cell chromatin remodeling complex, esBAF, is essential for embryonic stem cell self-renewal and pluripotency , 2009, Proceedings of the National Academy of Sciences.

[27]  B. Panning,et al.  An RNAi Screen of Chromatin Proteins Identifies Tip60-p400 as a Regulator of Embryonic Stem Cell Identity , 2008, Cell.

[28]  N. D. Clarke,et al.  Integration of External Signaling Pathways with the Core Transcriptional Network in Embryonic Stem Cells , 2008, Cell.

[29]  Daniel J. Hoeppner,et al.  Global transcription in pluripotent embryonic stem cells. , 2008, Cell stem cell.

[30]  K. Abe,et al.  Molecular dynamics of heterochromatin protein 1beta, HP1beta, during mouse preimplantation development. , 2007, The Journal of reproduction and development.

[31]  Tom Misteli,et al.  Chromatin in pluripotent embryonic stem cells and differentiation , 2006, Nature Reviews Molecular Cell Biology.

[32]  Rudolf Jaenisch,et al.  Efficient method to generate single‐copy transgenic mice by site‐specific integration in embryonic stem cells , 2006, Genesis.

[33]  M. Szyf,et al.  The Oncoprotein Set/TAF-1β, an Inhibitor of Histone Acetyltransferase, Inhibits Active Demethylation of DNA, Integrating DNA Methylation and Transcriptional Silencing* , 2002, The Journal of Biological Chemistry.

[34]  P. McNamara,et al.  Regulation of Histone Acetylation and Transcription by INHAT, a Human Cellular Complex Containing the Set Oncoprotein , 2001, Cell.

[35]  N. Tanuma,et al.  Up-regulation of I-2(PP2A)/SET gene expression in rat primary hepatomas and regenerating livers. , 2000, Cancer letters.

[36]  R. McKay,et al.  Efficient generation of midbrain and hindbrain neurons from mouse embryonic stem cells , 2000, Nature Biotechnology.

[37]  J. Miyazaki,et al.  Quantitative expression of Oct-3/4 defines differentiation, dedifferentiation or self-renewal of ES cells , 2000, Nature Genetics.

[38]  K. Nagata,et al.  Histone‐ and chromatin‐binding activity of template activating factor‐I , 1999, FEBS letters.

[39]  B. Ballermann,et al.  Expression of SET, an inhibitor of protein phosphatase 2A, in renal development and Wilms' tumor. , 1998, Journal of the American Society of Nephrology : JASN.

[40]  K. Nagata,et al.  Cellular localization and expression of template-activating factor I in different cell types. , 1998, Experimental cell research.

[41]  K. Yano,et al.  Replication factor encoded by a putative oncogene, set, associated with myeloid leukemogenesis. , 1995, Proceedings of the National Academy of Sciences of the United States of America.

[42]  K. Matsumoto,et al.  Template activating factor I, a novel host factor required to stimulate the adenovirus core DNA replication. , 1993, The Journal of biological chemistry.

[43]  M. Kaufman,et al.  Establishment in culture of pluripotential cells from mouse embryos , 1981, Nature.

[44]  K. Abe,et al.  Molecular dynamics of heterochromatin protein 1beta, HP1beta, during mouse preimplantation development. , 2007, Journal of reproduction and development.

[45]  T. Misteli,et al.  Hyperdynamic plasticity of chromatin proteins in pluripotent embryonic stem cells. , 2006, Developmental cell.