CRISPRStudio: A User-Friendly Software for Rapid CRISPR Array Visualization
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Sylvain Moineau | Shiraz A Shah | Shiraz A. Shah | Moïra B Dion | Simon J Labrie | S. Moineau | S. Labrie | Moïra B. Dion
[1] M. Allard,et al. Molecular characterization of Salmonella Typhimurium isolated in Brazil by CRISPR-MVLST. , 2017, Journal of microbiological methods.
[2] Z. Pan,et al. Subtyping Salmonella enterica serovar Derby with multilocus sequence typing (MLST) and clustered regularly interspaced short palindromic repeats (CRISPRs) , 2017 .
[3] Chris M. Brown,et al. CRISPRDetect: A flexible algorithm to define CRISPR arrays , 2016, BMC Genomics.
[4] Philippe Horvath,et al. Diversity, Activity, and Evolution of CRISPR Loci in Streptococcus thermophilus , 2007, Journal of bacteriology.
[5] R. Barrangou,et al. Diversity Short Palindromic Repeat ( CRISPR ) Locus Basis of Clustered Regularly Interspaced Lactobacillus buchneri Genotyping on the , 2014 .
[6] Jianguo Xu,et al. Reemergence of human plague in Yunnan, China in 2016 , 2018, PloS one.
[7] N. Shariat,et al. Prevalence of Group I Salmonella Kentucky in domestic food animals from Pennsylvania and overlap with human clinical CRISPR sequence types , 2018, Zoonoses and public health.
[8] Philippe Horvath,et al. Phage Response to CRISPR-Encoded Resistance in Streptococcus thermophilus , 2007, Journal of bacteriology.
[9] P. Horvath,et al. The CRISPR-Cas app goes viral. , 2017, Current opinion in microbiology.
[10] Philippe Horvath,et al. CRISPR: new horizons in phage resistance and strain identification. , 2012, Annual review of food science and technology.
[11] R. Barrangou,et al. Characterization and Exploitation of CRISPR Loci in Bifidobacterium longum , 2017, Front. Microbiol..
[12] Philippe Horvath,et al. The CRISPR/Cas bacterial immune system cleaves bacteriophage and plasmid DNA , 2010, Nature.
[13] R. Barrangou,et al. CRISPR Diversity and Microevolution in Clostridium difficile , 2016, Genome biology and evolution.
[14] P. Glaser,et al. Analysis of the type II-A CRISPR-Cas system of Streptococcus agalactiae reveals distinctive features according to genetic lineages , 2015, Front. Genet..
[15] M. Ugarte-Ruiz,et al. Efficacy of a typing scheme for Campylobacter based on the combination of true and questionable CRISPR. , 2015, Journal of microbiological methods.
[16] Konstantin Severinov,et al. Interference by clustered regularly interspaced short palindromic repeat (CRISPR) RNA is governed by a seed sequence , 2011, Proceedings of the National Academy of Sciences.
[17] HuQinghua,et al. Association of CRISPR/Cas Evolution with Vibrio parahaemolyticus Virulence Factors and Genotypes , 2015 .
[18] Jennifer A. Doudna,et al. Integrase-mediated spacer acquisition during CRISPR–Cas adaptive immunity , 2015, Nature.
[19] Y. Kawamura,et al. Diversity and microevolution of CRISPR loci in Helicobacter cinaedi , 2017, PloS one.
[20] P. Tsai,et al. Clustered Regularly Interspaced Short Palindromic Repeats Are emm Type-Specific in Highly Prevalent Group A Streptococci , 2015, PloS one.
[21] P. Moodley,et al. Molecular Characterization of Corynebacterium diphtheriae Outbreak Isolates, South Africa, March–June 2015 , 2017, Emerging infectious diseases.
[22] R. Barrangou,et al. CRISPR Provides Acquired Resistance Against Viruses in Prokaryotes , 2007, Science.
[23] R. Barrangou,et al. CRISPR Visualizer: rapid identification and visualization of CRISPR loci via an automated high-throughput processing pipeline , 2018, RNA biology.
[24] P. Lanotte,et al. Group B Streptococcus Vaginal Carriage in Pregnant Women as Deciphered by Clustered Regularly Interspaced Short Palindromic Repeat Analysis , 2018, Journal of Clinical Microbiology.
[25] R. Barrangou,et al. Characterization and evolution of Salmonella CRISPR-Cas systems. , 2015, Microbiology.
[26] Qun Sun,et al. Association of CRISPR/Cas evolution with Vibrio parahaemolyticus virulence factors and genotypes. , 2015, Foodborne pathogens and disease.
[27] K. Makino,et al. Nucleotide sequence of the iap gene, responsible for alkaline phosphatase isozyme conversion in Escherichia coli, and identification of the gene product , 1987, Journal of bacteriology.
[28] S. Forsythe,et al. CRISPR-cas loci profiling of Cronobacter sakazakii pathovars. , 2016, Future microbiology.
[29] H. Cadillo-Quiroz,et al. CRISPR Associated Diversity within a Population of Sulfolobus islandicus , 2010, PloS one.
[30] R. Barrangou,et al. The combination of CRISPR-MVLST and PFGE provides increased discriminatory power for differentiating human clinical isolates of Salmonella enterica subsp. enterica serovar Enteritidis. , 2013, Food microbiology.
[31] D. Lipman,et al. Improved tools for biological sequence comparison. , 1988, Proceedings of the National Academy of Sciences of the United States of America.
[32] Philippe Horvath,et al. The Streptococcus thermophilus CRISPR/Cas system provides immunity in Escherichia coli , 2011, Nucleic acids research.
[33] Jean-Baptiste Veyrieras,et al. Phylogenetic Distribution of CRISPR-Cas Systems in Antibiotic-Resistant Pseudomonas aeruginosa , 2015, mBio.
[34] Z. Pan,et al. Genetic analysis of Salmonella enterica serovar Gallinarum biovar Pullorum based on characterization and evolution of CRISPR sequence. , 2017, Veterinary microbiology.
[35] S. Forsythe,et al. DNA-Sequence Based Typing of the Cronobacter Genus Using MLST, CRISPR-cas Array and Capsular Profiling , 2017, Front. Microbiol..
[36] K. Makino,et al. Unusual nucleotide arrangement with repeated sequences in the Escherichia coli K-12 chromosome , 1989, Journal of bacteriology.
[37] P. Mittraparp-arthorn,et al. CRISPR-like sequences in Helicobacter pylori and application in genotyping , 2017, Gut Pathogens.